data_6P0K # _model_server_result.job_id Mjah-GmqmjOMe4tZ_Rtqdw _model_server_result.datetime_utc '2024-10-11 06:18:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6p0k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 6P0K # _exptl.entry_id 6P0K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6P0K _cell.length_a 65.281 _cell.length_b 104.924 _cell.length_c 55.409 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6P0K _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OH TYR 82 B TYR 82 1_555 D S1 NLV . B NLV 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.475 ? metalc ? metalc1 A OG SER 28 B SER 28 1_555 B CA CA . B CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc2 B CA CA . B CA 501 1_555 E O2B GDP . B GDP 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? metalc ? metalc3 B CA CA . B CA 501 1_555 F O HOH . B HOH 628 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc4 B CA CA . B CA 501 1_555 F O HOH . B HOH 631 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc5 B CA CA . B CA 501 1_555 F O HOH . B HOH 636 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc6 B CA CA . B CA 501 1_555 F O HOH . B HOH 651 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6P0K _atom_sites.fract_transf_matrix[1][1] 0.015318 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009531 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018048 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA B 1 501 2 CA CA . C 3 CL B 1 502 1 CL CL . D 4 NLV B 1 503 301 NLV LIG . E 5 GDP B 1 504 401 GDP GDP . F 6 HOH B 1 601 122 HOH HOH . F 6 HOH B 2 602 38 HOH HOH . F 6 HOH B 3 603 39 HOH HOH . F 6 HOH B 4 604 32 HOH HOH . F 6 HOH B 5 605 216 HOH HOH . F 6 HOH B 6 606 63 HOH HOH . F 6 HOH B 7 607 155 HOH HOH . F 6 HOH B 8 608 180 HOH HOH . F 6 HOH B 9 609 139 HOH HOH . F 6 HOH B 10 610 214 HOH HOH . F 6 HOH B 11 611 52 HOH HOH . F 6 HOH B 12 612 86 HOH HOH . F 6 HOH B 13 613 82 HOH HOH . F 6 HOH B 14 614 88 HOH HOH . F 6 HOH B 15 615 194 HOH HOH . F 6 HOH B 16 616 151 HOH HOH . F 6 HOH B 17 617 8 HOH HOH . F 6 HOH B 18 618 109 HOH HOH . F 6 HOH B 19 619 90 HOH HOH . F 6 HOH B 20 620 154 HOH HOH . F 6 HOH B 21 621 94 HOH HOH . F 6 HOH B 22 622 108 HOH HOH . F 6 HOH B 23 623 126 HOH HOH . F 6 HOH B 24 624 137 HOH HOH . F 6 HOH B 25 625 112 HOH HOH . F 6 HOH B 26 626 85 HOH HOH . F 6 HOH B 27 627 34 HOH HOH . F 6 HOH B 28 628 3 HOH HOH . F 6 HOH B 29 629 93 HOH HOH . F 6 HOH B 30 630 1 HOH HOH . F 6 HOH B 31 631 9 HOH HOH . F 6 HOH B 32 632 144 HOH HOH . F 6 HOH B 33 633 211 HOH HOH . F 6 HOH B 34 634 18 HOH HOH . F 6 HOH B 35 635 23 HOH HOH . F 6 HOH B 36 636 7 HOH HOH . F 6 HOH B 37 637 147 HOH HOH . F 6 HOH B 38 638 26 HOH HOH . F 6 HOH B 39 639 87 HOH HOH . F 6 HOH B 40 640 149 HOH HOH . F 6 HOH B 41 641 28 HOH HOH . F 6 HOH B 42 642 64 HOH HOH . F 6 HOH B 43 643 41 HOH HOH . F 6 HOH B 44 644 29 HOH HOH . F 6 HOH B 45 645 53 HOH HOH . F 6 HOH B 46 646 70 HOH HOH . F 6 HOH B 47 647 96 HOH HOH . F 6 HOH B 48 648 10 HOH HOH . F 6 HOH B 49 649 31 HOH HOH . F 6 HOH B 50 650 158 HOH HOH . F 6 HOH B 51 651 16 HOH HOH . F 6 HOH B 52 652 25 HOH HOH . F 6 HOH B 53 653 14 HOH HOH . F 6 HOH B 54 654 54 HOH HOH . F 6 HOH B 55 655 65 HOH HOH . F 6 HOH B 56 656 89 HOH HOH . F 6 HOH B 57 657 95 HOH HOH . F 6 HOH B 58 658 76 HOH HOH . F 6 HOH B 59 659 121 HOH HOH . F 6 HOH B 60 660 140 HOH HOH . F 6 HOH B 61 661 15 HOH HOH . F 6 HOH B 62 662 30 HOH HOH . F 6 HOH B 63 663 61 HOH HOH . F 6 HOH B 64 664 24 HOH HOH . F 6 HOH B 65 665 83 HOH HOH . F 6 HOH B 66 666 148 HOH HOH . F 6 HOH B 67 667 141 HOH HOH . F 6 HOH B 68 668 189 HOH HOH . F 6 HOH B 69 669 131 HOH HOH . F 6 HOH B 70 670 177 HOH HOH . F 6 HOH B 71 671 152 HOH HOH . F 6 HOH B 72 672 11 HOH HOH . F 6 HOH B 73 673 43 HOH HOH . F 6 HOH B 74 674 2 HOH HOH . F 6 HOH B 75 675 42 HOH HOH . F 6 HOH B 76 676 79 HOH HOH . F 6 HOH B 77 677 49 HOH HOH . F 6 HOH B 78 678 193 HOH HOH . F 6 HOH B 79 679 71 HOH HOH . F 6 HOH B 80 680 165 HOH HOH . F 6 HOH B 81 681 21 HOH HOH . F 6 HOH B 82 682 20 HOH HOH . F 6 HOH B 83 683 12 HOH HOH . F 6 HOH B 84 684 73 HOH HOH . F 6 HOH B 85 685 98 HOH HOH . F 6 HOH B 86 686 101 HOH HOH . F 6 HOH B 87 687 119 HOH HOH . F 6 HOH B 88 688 55 HOH HOH . F 6 HOH B 89 689 13 HOH HOH . F 6 HOH B 90 690 62 HOH HOH . F 6 HOH B 91 691 159 HOH HOH . F 6 HOH B 92 692 145 HOH HOH . F 6 HOH B 93 693 153 HOH HOH . F 6 HOH B 94 694 17 HOH HOH . F 6 HOH B 95 695 187 HOH HOH . F 6 HOH B 96 696 22 HOH HOH . F 6 HOH B 97 697 100 HOH HOH . F 6 HOH B 98 698 51 HOH HOH . F 6 HOH B 99 699 142 HOH HOH . F 6 HOH B 100 700 6 HOH HOH . F 6 HOH B 101 701 77 HOH HOH . F 6 HOH B 102 702 35 HOH HOH . F 6 HOH B 103 703 111 HOH HOH . F 6 HOH B 104 704 161 HOH HOH . F 6 HOH B 105 705 166 HOH HOH . F 6 HOH B 106 706 45 HOH HOH . F 6 HOH B 107 707 143 HOH HOH . F 6 HOH B 108 708 138 HOH HOH . F 6 HOH B 109 709 204 HOH HOH . F 6 HOH B 110 710 56 HOH HOH . F 6 HOH B 111 711 118 HOH HOH . F 6 HOH B 112 712 208 HOH HOH . F 6 HOH B 113 713 67 HOH HOH . F 6 HOH B 114 714 84 HOH HOH . F 6 HOH B 115 715 198 HOH HOH . F 6 HOH B 116 716 5 HOH HOH . F 6 HOH B 117 717 117 HOH HOH . F 6 HOH B 118 718 50 HOH HOH . F 6 HOH B 119 719 75 HOH HOH . F 6 HOH B 120 720 105 HOH HOH . F 6 HOH B 121 721 132 HOH HOH . F 6 HOH B 122 722 27 HOH HOH . F 6 HOH B 123 723 72 HOH HOH . F 6 HOH B 124 724 68 HOH HOH . F 6 HOH B 125 725 47 HOH HOH . F 6 HOH B 126 726 59 HOH HOH . F 6 HOH B 127 727 80 HOH HOH . F 6 HOH B 128 728 175 HOH HOH . F 6 HOH B 129 729 36 HOH HOH . F 6 HOH B 130 730 33 HOH HOH . F 6 HOH B 131 731 134 HOH HOH . F 6 HOH B 132 732 146 HOH HOH . F 6 HOH B 133 733 37 HOH HOH . F 6 HOH B 134 734 91 HOH HOH . F 6 HOH B 135 735 57 HOH HOH . F 6 HOH B 136 736 4 HOH HOH . F 6 HOH B 137 737 103 HOH HOH . F 6 HOH B 138 738 19 HOH HOH . F 6 HOH B 139 739 40 HOH HOH . F 6 HOH B 140 740 136 HOH HOH . F 6 HOH B 141 741 58 HOH HOH . F 6 HOH B 142 742 97 HOH HOH . F 6 HOH B 143 743 104 HOH HOH . F 6 HOH B 144 744 160 HOH HOH . F 6 HOH B 145 745 44 HOH HOH . F 6 HOH B 146 746 128 HOH HOH . F 6 HOH B 147 747 205 HOH HOH . F 6 HOH B 148 748 157 HOH HOH . F 6 HOH B 149 749 114 HOH HOH . F 6 HOH B 150 750 129 HOH HOH . F 6 HOH B 151 751 221 HOH HOH . F 6 HOH B 152 752 217 HOH HOH . F 6 HOH B 153 753 197 HOH HOH . F 6 HOH B 154 754 48 HOH HOH . F 6 HOH B 155 755 66 HOH HOH . F 6 HOH B 156 756 210 HOH HOH . F 6 HOH B 157 757 164 HOH HOH . F 6 HOH B 158 758 113 HOH HOH . F 6 HOH B 159 759 182 HOH HOH . F 6 HOH B 160 760 115 HOH HOH . F 6 HOH B 161 761 167 HOH HOH . F 6 HOH B 162 762 181 HOH HOH . F 6 HOH B 163 763 168 HOH HOH . F 6 HOH B 164 764 200 HOH HOH . F 6 HOH B 165 765 202 HOH HOH . F 6 HOH B 166 766 185 HOH HOH . F 6 HOH B 167 767 170 HOH HOH . F 6 HOH B 168 768 179 HOH HOH . F 6 HOH B 169 769 201 HOH HOH . F 6 HOH B 170 770 99 HOH HOH . F 6 HOH B 171 771 78 HOH HOH . F 6 HOH B 172 772 120 HOH HOH . F 6 HOH B 173 773 207 HOH HOH . F 6 HOH B 174 774 169 HOH HOH . F 6 HOH B 175 775 81 HOH HOH . F 6 HOH B 176 776 186 HOH HOH . F 6 HOH B 177 777 74 HOH HOH . F 6 HOH B 178 778 203 HOH HOH . F 6 HOH B 179 779 206 HOH HOH . F 6 HOH B 180 780 135 HOH HOH . F 6 HOH B 181 781 127 HOH HOH . F 6 HOH B 182 782 171 HOH HOH . F 6 HOH B 183 783 133 HOH HOH . F 6 HOH B 184 784 92 HOH HOH . F 6 HOH B 185 785 156 HOH HOH . F 6 HOH B 186 786 191 HOH HOH . F 6 HOH B 187 787 195 HOH HOH . F 6 HOH B 188 788 46 HOH HOH . F 6 HOH B 189 789 192 HOH HOH . F 6 HOH B 190 790 163 HOH HOH . F 6 HOH B 191 791 110 HOH HOH . F 6 HOH B 192 792 123 HOH HOH . F 6 HOH B 193 793 213 HOH HOH . F 6 HOH B 194 794 188 HOH HOH . F 6 HOH B 195 795 183 HOH HOH . F 6 HOH B 196 796 125 HOH HOH . F 6 HOH B 197 797 218 HOH HOH . F 6 HOH B 198 798 116 HOH HOH . F 6 HOH B 199 799 102 HOH HOH . F 6 HOH B 200 800 184 HOH HOH . F 6 HOH B 201 801 178 HOH HOH . F 6 HOH B 202 802 196 HOH HOH . F 6 HOH B 203 803 173 HOH HOH . F 6 HOH B 204 804 172 HOH HOH . F 6 HOH B 205 805 212 HOH HOH . F 6 HOH B 206 806 106 HOH HOH . F 6 HOH B 207 807 162 HOH HOH . F 6 HOH B 208 808 215 HOH HOH . F 6 HOH B 209 809 107 HOH HOH . F 6 HOH B 210 810 176 HOH HOH . F 6 HOH B 211 811 209 HOH HOH . F 6 HOH B 212 812 69 HOH HOH . F 6 HOH B 213 813 124 HOH HOH . F 6 HOH B 214 814 130 HOH HOH . F 6 HOH B 215 815 199 HOH HOH . F 6 HOH B 216 816 150 HOH HOH . F 6 HOH B 217 817 190 HOH HOH . F 6 HOH B 218 818 219 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 26.47 _atom_site.Cartn_y 10.338 _atom_site.Cartn_z 4.815 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 17.2 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 501 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 138 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 354 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #