data_6P1B # _model_server_result.job_id Fegzf5Ay1YGiXKYz9mbODQ _model_server_result.datetime_utc '2024-10-12 17:23:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6p1b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":208}' # _entry.id 6P1B # _exptl.entry_id 6P1B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.68 _cell.angle_gamma 90 _cell.entry_id 6P1B _cell.length_a 32.233 _cell.length_b 78.905 _cell.length_c 68.497 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6P1B _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,P 1 1 B,H,I,J,K,L,M,N,O,Q 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 M N N ? 3 N N N ? 3 O N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6P1B _atom_sites.fract_transf_matrix[1][1] 0.031024 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004736 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012673 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014768 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 201 2 CL CL . D 2 CL A 1 202 3 CL CL . E 2 CL A 1 203 5 CL CL . F 2 CL A 1 204 7 CL CL . G 3 EDO A 1 205 5 EDO EDO . H 2 CL B 1 201 1 CL CL . I 2 CL B 1 202 4 CL CL . J 2 CL B 1 203 6 CL CL . K 2 CL B 1 204 9 CL CL . L 2 CL B 1 205 10 CL CL . M 3 EDO B 1 206 1 EDO EDO . N 3 EDO B 1 207 3 EDO EDO . O 3 EDO B 1 208 4 EDO EDO . P 4 HOH A 1 301 19 HOH HOH . P 4 HOH A 2 302 117 HOH HOH . P 4 HOH A 3 303 82 HOH HOH . P 4 HOH A 4 304 64 HOH HOH . P 4 HOH A 5 305 28 HOH HOH . P 4 HOH A 6 306 134 HOH HOH . P 4 HOH A 7 307 53 HOH HOH . P 4 HOH A 8 308 48 HOH HOH . P 4 HOH A 9 309 30 HOH HOH . P 4 HOH A 10 310 46 HOH HOH . P 4 HOH A 11 311 24 HOH HOH . P 4 HOH A 12 312 156 HOH HOH . P 4 HOH A 13 313 2 HOH HOH . P 4 HOH A 14 314 59 HOH HOH . P 4 HOH A 15 315 6 HOH HOH . P 4 HOH A 16 316 66 HOH HOH . P 4 HOH A 17 317 47 HOH HOH . P 4 HOH A 18 318 36 HOH HOH . P 4 HOH A 19 319 43 HOH HOH . P 4 HOH A 20 320 15 HOH HOH . P 4 HOH A 21 321 37 HOH HOH . P 4 HOH A 22 322 114 HOH HOH . P 4 HOH A 23 323 55 HOH HOH . P 4 HOH A 24 324 104 HOH HOH . P 4 HOH A 25 325 135 HOH HOH . P 4 HOH A 26 326 128 HOH HOH . P 4 HOH A 27 327 77 HOH HOH . P 4 HOH A 28 328 73 HOH HOH . P 4 HOH A 29 329 34 HOH HOH . P 4 HOH A 30 330 139 HOH HOH . P 4 HOH A 31 331 27 HOH HOH . P 4 HOH A 32 332 9 HOH HOH . P 4 HOH A 33 333 83 HOH HOH . P 4 HOH A 34 334 62 HOH HOH . P 4 HOH A 35 335 63 HOH HOH . P 4 HOH A 36 336 44 HOH HOH . P 4 HOH A 37 337 97 HOH HOH . P 4 HOH A 38 338 150 HOH HOH . P 4 HOH A 39 339 119 HOH HOH . P 4 HOH A 40 340 103 HOH HOH . P 4 HOH A 41 341 52 HOH HOH . P 4 HOH A 42 342 159 HOH HOH . P 4 HOH A 43 343 33 HOH HOH . P 4 HOH A 44 344 107 HOH HOH . P 4 HOH A 45 345 112 HOH HOH . P 4 HOH A 46 346 38 HOH HOH . P 4 HOH A 47 347 41 HOH HOH . P 4 HOH A 48 348 124 HOH HOH . P 4 HOH A 49 349 131 HOH HOH . P 4 HOH A 50 350 96 HOH HOH . P 4 HOH A 51 351 29 HOH HOH . P 4 HOH A 52 352 78 HOH HOH . P 4 HOH A 53 353 72 HOH HOH . P 4 HOH A 54 354 154 HOH HOH . P 4 HOH A 55 355 76 HOH HOH . P 4 HOH A 56 356 93 HOH HOH . P 4 HOH A 57 357 94 HOH HOH . P 4 HOH A 58 358 1 HOH HOH . P 4 HOH A 59 359 133 HOH HOH . P 4 HOH A 60 360 138 HOH HOH . P 4 HOH A 61 361 23 HOH HOH . P 4 HOH A 62 362 106 HOH HOH . P 4 HOH A 63 363 3 HOH HOH . P 4 HOH A 64 364 81 HOH HOH . P 4 HOH A 65 365 105 HOH HOH . P 4 HOH A 66 366 32 HOH HOH . P 4 HOH A 67 367 99 HOH HOH . P 4 HOH A 68 368 122 HOH HOH . P 4 HOH A 69 369 108 HOH HOH . P 4 HOH A 70 370 110 HOH HOH . P 4 HOH A 71 371 120 HOH HOH . P 4 HOH A 72 372 75 HOH HOH . P 4 HOH A 73 373 153 HOH HOH . P 4 HOH A 74 374 101 HOH HOH . P 4 HOH A 75 375 126 HOH HOH . P 4 HOH A 76 376 132 HOH HOH . P 4 HOH A 77 377 90 HOH HOH . P 4 HOH A 78 378 35 HOH HOH . P 4 HOH A 79 379 102 HOH HOH . P 4 HOH A 80 380 68 HOH HOH . P 4 HOH A 81 381 118 HOH HOH . P 4 HOH A 82 382 121 HOH HOH . P 4 HOH A 83 383 54 HOH HOH . P 4 HOH A 84 384 14 HOH HOH . P 4 HOH A 85 385 151 HOH HOH . P 4 HOH A 86 386 57 HOH HOH . P 4 HOH A 87 387 129 HOH HOH . Q 4 HOH B 1 301 85 HOH HOH . Q 4 HOH B 2 302 13 HOH HOH . Q 4 HOH B 3 303 49 HOH HOH . Q 4 HOH B 4 304 100 HOH HOH . Q 4 HOH B 5 305 113 HOH HOH . Q 4 HOH B 6 306 16 HOH HOH . Q 4 HOH B 7 307 5 HOH HOH . Q 4 HOH B 8 308 45 HOH HOH . Q 4 HOH B 9 309 140 HOH HOH . Q 4 HOH B 10 310 31 HOH HOH . Q 4 HOH B 11 311 51 HOH HOH . Q 4 HOH B 12 312 91 HOH HOH . Q 4 HOH B 13 313 18 HOH HOH . Q 4 HOH B 14 314 111 HOH HOH . Q 4 HOH B 15 315 61 HOH HOH . Q 4 HOH B 16 316 26 HOH HOH . Q 4 HOH B 17 317 11 HOH HOH . Q 4 HOH B 18 318 143 HOH HOH . Q 4 HOH B 19 319 10 HOH HOH . Q 4 HOH B 20 320 22 HOH HOH . Q 4 HOH B 21 321 56 HOH HOH . Q 4 HOH B 22 322 65 HOH HOH . Q 4 HOH B 23 323 42 HOH HOH . Q 4 HOH B 24 324 137 HOH HOH . Q 4 HOH B 25 325 17 HOH HOH . Q 4 HOH B 26 326 50 HOH HOH . Q 4 HOH B 27 327 40 HOH HOH . Q 4 HOH B 28 328 136 HOH HOH . Q 4 HOH B 29 329 147 HOH HOH . Q 4 HOH B 30 330 79 HOH HOH . Q 4 HOH B 31 331 146 HOH HOH . Q 4 HOH B 32 332 157 HOH HOH . Q 4 HOH B 33 333 86 HOH HOH . Q 4 HOH B 34 334 8 HOH HOH . Q 4 HOH B 35 335 25 HOH HOH . Q 4 HOH B 36 336 7 HOH HOH . Q 4 HOH B 37 337 149 HOH HOH . Q 4 HOH B 38 338 160 HOH HOH . Q 4 HOH B 39 339 145 HOH HOH . Q 4 HOH B 40 340 152 HOH HOH . Q 4 HOH B 41 341 92 HOH HOH . Q 4 HOH B 42 342 95 HOH HOH . Q 4 HOH B 43 343 21 HOH HOH . Q 4 HOH B 44 344 4 HOH HOH . Q 4 HOH B 45 345 80 HOH HOH . Q 4 HOH B 46 346 39 HOH HOH . Q 4 HOH B 47 347 20 HOH HOH . Q 4 HOH B 48 348 125 HOH HOH . Q 4 HOH B 49 349 12 HOH HOH . Q 4 HOH B 50 350 127 HOH HOH . Q 4 HOH B 51 351 70 HOH HOH . Q 4 HOH B 52 352 87 HOH HOH . Q 4 HOH B 53 353 116 HOH HOH . Q 4 HOH B 54 354 115 HOH HOH . Q 4 HOH B 55 355 155 HOH HOH . Q 4 HOH B 56 356 141 HOH HOH . Q 4 HOH B 57 357 142 HOH HOH . Q 4 HOH B 58 358 148 HOH HOH . Q 4 HOH B 59 359 161 HOH HOH . Q 4 HOH B 60 360 58 HOH HOH . Q 4 HOH B 61 361 144 HOH HOH . Q 4 HOH B 62 362 89 HOH HOH . Q 4 HOH B 63 363 69 HOH HOH . Q 4 HOH B 64 364 88 HOH HOH . Q 4 HOH B 65 365 130 HOH HOH . Q 4 HOH B 66 366 60 HOH HOH . Q 4 HOH B 67 367 98 HOH HOH . Q 4 HOH B 68 368 109 HOH HOH . Q 4 HOH B 69 369 158 HOH HOH . Q 4 HOH B 70 370 74 HOH HOH . Q 4 HOH B 71 371 84 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . O 3 2.129 0.545 -0.681 1 96.72 ? C1 EDO 208 B 1 HETATM 2 O O1 EDO . . . O 3 2.208 1.342 -1.861 1 75.44 ? O1 EDO 208 B 1 HETATM 3 C C2 EDO . . . O 3 1.208 1.193 0.342 1 94.31 ? C2 EDO 208 B 1 HETATM 4 O O2 EDO . . . O 3 -0.072 1.436 -0.24 1 78.11 ? O2 EDO 208 B 1 HETATM 5 H H11 EDO . . . O 3 3.127 0.427 -0.252 1 116.08 ? H11 EDO 208 B 1 HETATM 6 H H12 EDO . . . O 3 1.753 -0.448 -0.935 1 116.08 ? H12 EDO 208 B 1 HETATM 7 H HO1 EDO . . . O 3 2.84 0.946 -2.476 1 90.55 ? HO1 EDO 208 B 1 HETATM 8 H H21 EDO . . . O 3 1.642 2.135 0.685 1 113.19 ? H21 EDO 208 B 1 HETATM 9 H H22 EDO . . . O 3 1.101 0.538 1.209 1 113.19 ? H22 EDO 208 B 1 HETATM 10 H HO2 EDO . . . O 3 -0.642 1.872 0.407 1 93.75 ? HO2 EDO 208 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #