data_6P1Y # _model_server_result.job_id QZl4yJ3w_CIO7m0RqeHsZQ _model_server_result.datetime_utc '2024-12-05 02:26:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6p1y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":101}' # _entry.id 6P1Y # _exptl.entry_id 6P1Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 18.038 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'AMMONIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6P1Y _cell.length_a 73.011 _cell.length_b 73.011 _cell.length_c 109.53 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6P1Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_445 -x-1,-y-1,z -1 0 0 0 -1 0 0 0 1 -73.011 -73.011 0 3 'crystal symmetry operation' 3_455 -y-1,x,z 0 -1 0 1 0 0 0 0 1 -73.011 0 0 4 'crystal symmetry operation' 4_545 y,-x-1,z 0 1 0 -1 0 0 0 0 1 0 -73.011 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id C _struct_conn.ptnr1_label_comp_id PYR _struct_conn.ptnr1_label_seq_id 1 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id PYR _struct_conn.ptnr1_auth_seq_id 25 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id N _struct_conn.ptnr2_label_comp_id VAL _struct_conn.ptnr2_label_seq_id 2 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id VAL _struct_conn.ptnr2_auth_seq_id 26 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.442 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'H4 N 1' _chem_comp.formula_weight 18.038 _chem_comp.id NH4 _chem_comp.mon_nstd_flag . _chem_comp.name 'AMMONIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N HN1 NH4 sing 237 n n N HN2 NH4 sing 238 n n N HN3 NH4 sing 239 n n N HN4 NH4 sing 240 n n # _atom_sites.entry_id 6P1Y _atom_sites.fract_transf_matrix[1][1] 0.013697 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013697 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00913 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NH4 A 1 101 1 NH4 NH4 . D 4 TLA B 1 201 1 TLA TLA . E 5 HOH A 1 201 29 HOH HOH . E 5 HOH A 2 202 6 HOH HOH . E 5 HOH A 3 203 8 HOH HOH . E 5 HOH A 4 204 38 HOH HOH . E 5 HOH A 5 205 55 HOH HOH . E 5 HOH A 6 206 71 HOH HOH . F 5 HOH B 1 301 21 HOH HOH . F 5 HOH B 2 302 26 HOH HOH . F 5 HOH B 3 303 15 HOH HOH . F 5 HOH B 4 304 47 HOH HOH . F 5 HOH B 5 305 2 HOH HOH . F 5 HOH B 6 306 4 HOH HOH . F 5 HOH B 7 307 13 HOH HOH . F 5 HOH B 8 308 20 HOH HOH . F 5 HOH B 9 309 17 HOH HOH . F 5 HOH B 10 310 1 HOH HOH . F 5 HOH B 11 311 3 HOH HOH . F 5 HOH B 12 312 22 HOH HOH . F 5 HOH B 13 313 35 HOH HOH . F 5 HOH B 14 314 12 HOH HOH . F 5 HOH B 15 315 25 HOH HOH . F 5 HOH B 16 316 19 HOH HOH . F 5 HOH B 17 317 5 HOH HOH . F 5 HOH B 18 318 9 HOH HOH . F 5 HOH B 19 319 14 HOH HOH . F 5 HOH B 20 320 11 HOH HOH . F 5 HOH B 21 321 18 HOH HOH . F 5 HOH B 22 322 27 HOH HOH . F 5 HOH B 23 323 31 HOH HOH . F 5 HOH B 24 324 10 HOH HOH . F 5 HOH B 25 325 40 HOH HOH . F 5 HOH B 26 326 53 HOH HOH . F 5 HOH B 27 327 68 HOH HOH . F 5 HOH B 28 328 69 HOH HOH . F 5 HOH B 29 329 52 HOH HOH . F 5 HOH B 30 330 66 HOH HOH . F 5 HOH B 31 331 63 HOH HOH . F 5 HOH B 32 332 70 HOH HOH . F 5 HOH B 33 333 32 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol N _atom_site.label_atom_id N _atom_site.label_comp_id NH4 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -44.106 _atom_site.Cartn_y -18.218 _atom_site.Cartn_z -13.4 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 53.08 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id N _atom_site.auth_comp_id NH4 _atom_site.auth_seq_id 101 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #