data_6P1Y # _model_server_result.job_id VwewHT_zStTdxT5qXpL65A _model_server_result.datetime_utc '2024-12-05 02:21:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6p1y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 6P1Y # _exptl.entry_id 6P1Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.087 _entity.id 4 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'L(+)-TARTARIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6P1Y _cell.length_a 73.011 _cell.length_b 73.011 _cell.length_c 109.53 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6P1Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_445 -x-1,-y-1,z -1 0 0 0 -1 0 0 0 1 -73.011 -73.011 0 3 'crystal symmetry operation' 3_455 -y-1,x,z 0 -1 0 1 0 0 0 0 1 -73.011 0 0 4 'crystal symmetry operation' 4_545 y,-x-1,z 0 1 0 -1 0 0 0 0 1 0 -73.011 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id C _struct_conn.ptnr1_label_comp_id PYR _struct_conn.ptnr1_label_seq_id 1 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id PYR _struct_conn.ptnr1_auth_seq_id 25 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id N _struct_conn.ptnr2_label_comp_id VAL _struct_conn.ptnr2_label_seq_id 2 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id VAL _struct_conn.ptnr2_auth_seq_id 26 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.442 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C4 H6 O6' _chem_comp.formula_weight 150.087 _chem_comp.id TLA _chem_comp.mon_nstd_flag . _chem_comp.name 'L(+)-TARTARIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 TLA doub 319 n n O11 C1 TLA sing 320 n n O11 H11 TLA sing 321 n n C1 C2 TLA sing 322 n n C2 O2 TLA sing 323 n n C2 C3 TLA sing 324 n n C2 H2 TLA sing 325 n n O2 HA TLA sing 326 n n C3 O3 TLA sing 327 n n C3 C4 TLA sing 328 n n C3 H3 TLA sing 329 n n O3 HB TLA sing 330 n n C4 O4 TLA doub 331 n n C4 O41 TLA sing 332 n n O41 H41 TLA sing 333 n n # _atom_sites.entry_id 6P1Y _atom_sites.fract_transf_matrix[1][1] 0.013697 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013697 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00913 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NH4 A 1 101 1 NH4 NH4 . D 4 TLA B 1 201 1 TLA TLA . E 5 HOH A 1 201 29 HOH HOH . E 5 HOH A 2 202 6 HOH HOH . E 5 HOH A 3 203 8 HOH HOH . E 5 HOH A 4 204 38 HOH HOH . E 5 HOH A 5 205 55 HOH HOH . E 5 HOH A 6 206 71 HOH HOH . F 5 HOH B 1 301 21 HOH HOH . F 5 HOH B 2 302 26 HOH HOH . F 5 HOH B 3 303 15 HOH HOH . F 5 HOH B 4 304 47 HOH HOH . F 5 HOH B 5 305 2 HOH HOH . F 5 HOH B 6 306 4 HOH HOH . F 5 HOH B 7 307 13 HOH HOH . F 5 HOH B 8 308 20 HOH HOH . F 5 HOH B 9 309 17 HOH HOH . F 5 HOH B 10 310 1 HOH HOH . F 5 HOH B 11 311 3 HOH HOH . F 5 HOH B 12 312 22 HOH HOH . F 5 HOH B 13 313 35 HOH HOH . F 5 HOH B 14 314 12 HOH HOH . F 5 HOH B 15 315 25 HOH HOH . F 5 HOH B 16 316 19 HOH HOH . F 5 HOH B 17 317 5 HOH HOH . F 5 HOH B 18 318 9 HOH HOH . F 5 HOH B 19 319 14 HOH HOH . F 5 HOH B 20 320 11 HOH HOH . F 5 HOH B 21 321 18 HOH HOH . F 5 HOH B 22 322 27 HOH HOH . F 5 HOH B 23 323 31 HOH HOH . F 5 HOH B 24 324 10 HOH HOH . F 5 HOH B 25 325 40 HOH HOH . F 5 HOH B 26 326 53 HOH HOH . F 5 HOH B 27 327 68 HOH HOH . F 5 HOH B 28 328 69 HOH HOH . F 5 HOH B 29 329 52 HOH HOH . F 5 HOH B 30 330 66 HOH HOH . F 5 HOH B 31 331 63 HOH HOH . F 5 HOH B 32 332 70 HOH HOH . F 5 HOH B 33 333 32 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 TLA . . . D 4 -43.265 -22.301 -15.184 1 67.32 ? O1 TLA 201 B 1 HETATM 2 O O11 TLA . . . D 4 -43.991 -20.603 -13.996 1 69.68 ? O11 TLA 201 B 1 HETATM 3 C C1 TLA . . . D 4 -43.521 -21.74 -14.11 1 69.04 ? C1 TLA 201 B 1 HETATM 4 C C2 TLA . . . D 4 -43.224 -22.492 -12.881 1 69.36 ? C2 TLA 201 B 1 HETATM 5 O O2 TLA . . . D 4 -43.882 -21.974 -11.748 1 70.61 ? O2 TLA 201 B 1 HETATM 6 C C3 TLA . . . D 4 -41.749 -22.369 -12.739 1 68.18 ? C3 TLA 201 B 1 HETATM 7 O O3 TLA . . . D 4 -41.342 -21.336 -11.845 1 73.71 ? O3 TLA 201 B 1 HETATM 8 C C4 TLA . . . D 4 -41.259 -23.704 -12.321 1 59.78 ? C4 TLA 201 B 1 HETATM 9 O O4 TLA . . . D 4 -41.367 -24.625 -13.096 1 57.39 ? O4 TLA 201 B 1 HETATM 10 O O41 TLA . . . D 4 -40.744 -23.831 -11.254 1 57.31 ? O41 TLA 201 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 345 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 10 #