data_6P2U # _model_server_result.job_id gGAet2KM7sVy6CPSf5Au7g _model_server_result.datetime_utc '2024-11-04 22:59:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6p2u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 6P2U # _exptl.entry_id 6P2U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6P2U _cell.length_a 51.04 _cell.length_b 68.25 _cell.length_c 121.22 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6P2U _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 198 A ASP 244 1_555 D MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? metalc ? metalc2 B O21 NO7 . A NO7 501 1_555 D MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.835 ? metalc ? metalc3 B O26 NO7 . A NO7 501 1_555 D MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.731 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 309 n n P O2 PO4 sing 310 n n P O3 PO4 sing 311 n n P O4 PO4 sing 312 n n # _atom_sites.entry_id 6P2U _atom_sites.fract_transf_matrix[1][1] 0.019592 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014652 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008249 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NO7 A 1 501 1 NO7 LIG . C 3 PO4 A 1 502 1 PO4 PO4 . D 4 MG A 1 503 1 MG MG . E 5 HOH A 1 601 65 HOH HOH . E 5 HOH A 2 602 243 HOH HOH . E 5 HOH A 3 603 315 HOH HOH . E 5 HOH A 4 604 276 HOH HOH . E 5 HOH A 5 605 319 HOH HOH . E 5 HOH A 6 606 172 HOH HOH . E 5 HOH A 7 607 130 HOH HOH . E 5 HOH A 8 608 113 HOH HOH . E 5 HOH A 9 609 163 HOH HOH . E 5 HOH A 10 610 134 HOH HOH . E 5 HOH A 11 611 73 HOH HOH . E 5 HOH A 12 612 186 HOH HOH . E 5 HOH A 13 613 214 HOH HOH . E 5 HOH A 14 614 275 HOH HOH . E 5 HOH A 15 615 138 HOH HOH . E 5 HOH A 16 616 241 HOH HOH . E 5 HOH A 17 617 87 HOH HOH . E 5 HOH A 18 618 60 HOH HOH . E 5 HOH A 19 619 76 HOH HOH . E 5 HOH A 20 620 268 HOH HOH . E 5 HOH A 21 621 34 HOH HOH . E 5 HOH A 22 622 94 HOH HOH . E 5 HOH A 23 623 110 HOH HOH . E 5 HOH A 24 624 42 HOH HOH . E 5 HOH A 25 625 25 HOH HOH . E 5 HOH A 26 626 2 HOH HOH . E 5 HOH A 27 627 62 HOH HOH . E 5 HOH A 28 628 10 HOH HOH . E 5 HOH A 29 629 217 HOH HOH . E 5 HOH A 30 630 108 HOH HOH . E 5 HOH A 31 631 256 HOH HOH . E 5 HOH A 32 632 59 HOH HOH . E 5 HOH A 33 633 22 HOH HOH . E 5 HOH A 34 634 95 HOH HOH . E 5 HOH A 35 635 116 HOH HOH . E 5 HOH A 36 636 198 HOH HOH . E 5 HOH A 37 637 45 HOH HOH . E 5 HOH A 38 638 49 HOH HOH . E 5 HOH A 39 639 114 HOH HOH . E 5 HOH A 40 640 210 HOH HOH . E 5 HOH A 41 641 246 HOH HOH . E 5 HOH A 42 642 19 HOH HOH . E 5 HOH A 43 643 21 HOH HOH . E 5 HOH A 44 644 31 HOH HOH . E 5 HOH A 45 645 178 HOH HOH . E 5 HOH A 46 646 127 HOH HOH . E 5 HOH A 47 647 153 HOH HOH . E 5 HOH A 48 648 23 HOH HOH . E 5 HOH A 49 649 8 HOH HOH . E 5 HOH A 50 650 24 HOH HOH . E 5 HOH A 51 651 57 HOH HOH . E 5 HOH A 52 652 32 HOH HOH . E 5 HOH A 53 653 162 HOH HOH . E 5 HOH A 54 654 90 HOH HOH . E 5 HOH A 55 655 160 HOH HOH . E 5 HOH A 56 656 135 HOH HOH . E 5 HOH A 57 657 71 HOH HOH . E 5 HOH A 58 658 50 HOH HOH . E 5 HOH A 59 659 286 HOH HOH . E 5 HOH A 60 660 118 HOH HOH . E 5 HOH A 61 661 75 HOH HOH . E 5 HOH A 62 662 64 HOH HOH . E 5 HOH A 63 663 47 HOH HOH . E 5 HOH A 64 664 30 HOH HOH . E 5 HOH A 65 665 96 HOH HOH . E 5 HOH A 66 666 27 HOH HOH . E 5 HOH A 67 667 37 HOH HOH . E 5 HOH A 68 668 61 HOH HOH . E 5 HOH A 69 669 68 HOH HOH . E 5 HOH A 70 670 277 HOH HOH . E 5 HOH A 71 671 204 HOH HOH . E 5 HOH A 72 672 17 HOH HOH . E 5 HOH A 73 673 43 HOH HOH . E 5 HOH A 74 674 206 HOH HOH . E 5 HOH A 75 675 301 HOH HOH . E 5 HOH A 76 676 7 HOH HOH . E 5 HOH A 77 677 137 HOH HOH . E 5 HOH A 78 678 48 HOH HOH . E 5 HOH A 79 679 12 HOH HOH . E 5 HOH A 80 680 78 HOH HOH . E 5 HOH A 81 681 201 HOH HOH . E 5 HOH A 82 682 111 HOH HOH . E 5 HOH A 83 683 221 HOH HOH . E 5 HOH A 84 684 202 HOH HOH . E 5 HOH A 85 685 100 HOH HOH . E 5 HOH A 86 686 53 HOH HOH . E 5 HOH A 87 687 88 HOH HOH . E 5 HOH A 88 688 259 HOH HOH . E 5 HOH A 89 689 250 HOH HOH . E 5 HOH A 90 690 74 HOH HOH . E 5 HOH A 91 691 238 HOH HOH . E 5 HOH A 92 692 267 HOH HOH . E 5 HOH A 93 693 216 HOH HOH . E 5 HOH A 94 694 44 HOH HOH . E 5 HOH A 95 695 84 HOH HOH . E 5 HOH A 96 696 109 HOH HOH . E 5 HOH A 97 697 92 HOH HOH . E 5 HOH A 98 698 123 HOH HOH . E 5 HOH A 99 699 66 HOH HOH . E 5 HOH A 100 700 29 HOH HOH . E 5 HOH A 101 701 103 HOH HOH . E 5 HOH A 102 702 136 HOH HOH . E 5 HOH A 103 703 165 HOH HOH . E 5 HOH A 104 704 77 HOH HOH . E 5 HOH A 105 705 26 HOH HOH . E 5 HOH A 106 706 312 HOH HOH . E 5 HOH A 107 707 232 HOH HOH . E 5 HOH A 108 708 79 HOH HOH . E 5 HOH A 109 709 14 HOH HOH . E 5 HOH A 110 710 316 HOH HOH . E 5 HOH A 111 711 236 HOH HOH . E 5 HOH A 112 712 11 HOH HOH . E 5 HOH A 113 713 220 HOH HOH . E 5 HOH A 114 714 81 HOH HOH . E 5 HOH A 115 715 99 HOH HOH . E 5 HOH A 116 716 209 HOH HOH . E 5 HOH A 117 717 13 HOH HOH . E 5 HOH A 118 718 290 HOH HOH . E 5 HOH A 119 719 152 HOH HOH . E 5 HOH A 120 720 122 HOH HOH . E 5 HOH A 121 721 263 HOH HOH . E 5 HOH A 122 722 282 HOH HOH . E 5 HOH A 123 723 175 HOH HOH . E 5 HOH A 124 724 9 HOH HOH . E 5 HOH A 125 725 86 HOH HOH . E 5 HOH A 126 726 39 HOH HOH . E 5 HOH A 127 727 306 HOH HOH . E 5 HOH A 128 728 54 HOH HOH . E 5 HOH A 129 729 128 HOH HOH . E 5 HOH A 130 730 56 HOH HOH . E 5 HOH A 131 731 139 HOH HOH . E 5 HOH A 132 732 166 HOH HOH . E 5 HOH A 133 733 285 HOH HOH . E 5 HOH A 134 734 144 HOH HOH . E 5 HOH A 135 735 126 HOH HOH . E 5 HOH A 136 736 234 HOH HOH . E 5 HOH A 137 737 55 HOH HOH . E 5 HOH A 138 738 41 HOH HOH . E 5 HOH A 139 739 264 HOH HOH . E 5 HOH A 140 740 117 HOH HOH . E 5 HOH A 141 741 51 HOH HOH . E 5 HOH A 142 742 233 HOH HOH . E 5 HOH A 143 743 107 HOH HOH . E 5 HOH A 144 744 304 HOH HOH . E 5 HOH A 145 745 15 HOH HOH . E 5 HOH A 146 746 288 HOH HOH . E 5 HOH A 147 747 119 HOH HOH . E 5 HOH A 148 748 35 HOH HOH . E 5 HOH A 149 749 296 HOH HOH . E 5 HOH A 150 750 36 HOH HOH . E 5 HOH A 151 751 179 HOH HOH . E 5 HOH A 152 752 69 HOH HOH . E 5 HOH A 153 753 157 HOH HOH . E 5 HOH A 154 754 215 HOH HOH . E 5 HOH A 155 755 242 HOH HOH . E 5 HOH A 156 756 20 HOH HOH . E 5 HOH A 157 757 52 HOH HOH . E 5 HOH A 158 758 97 HOH HOH . E 5 HOH A 159 759 148 HOH HOH . E 5 HOH A 160 760 317 HOH HOH . E 5 HOH A 161 761 141 HOH HOH . E 5 HOH A 162 762 239 HOH HOH . E 5 HOH A 163 763 72 HOH HOH . E 5 HOH A 164 764 176 HOH HOH . E 5 HOH A 165 765 142 HOH HOH . E 5 HOH A 166 766 28 HOH HOH . E 5 HOH A 167 767 121 HOH HOH . E 5 HOH A 168 768 33 HOH HOH . E 5 HOH A 169 769 297 HOH HOH . E 5 HOH A 170 770 16 HOH HOH . E 5 HOH A 171 771 102 HOH HOH . E 5 HOH A 172 772 106 HOH HOH . E 5 HOH A 173 773 149 HOH HOH . E 5 HOH A 174 774 205 HOH HOH . E 5 HOH A 175 775 227 HOH HOH . E 5 HOH A 176 776 98 HOH HOH . E 5 HOH A 177 777 314 HOH HOH . E 5 HOH A 178 778 133 HOH HOH . E 5 HOH A 179 779 3 HOH HOH . E 5 HOH A 180 780 320 HOH HOH . E 5 HOH A 181 781 213 HOH HOH . E 5 HOH A 182 782 257 HOH HOH . E 5 HOH A 183 783 146 HOH HOH . E 5 HOH A 184 784 80 HOH HOH . E 5 HOH A 185 785 120 HOH HOH . E 5 HOH A 186 786 203 HOH HOH . E 5 HOH A 187 787 302 HOH HOH . E 5 HOH A 188 788 124 HOH HOH . E 5 HOH A 189 789 91 HOH HOH . E 5 HOH A 190 790 18 HOH HOH . E 5 HOH A 191 791 154 HOH HOH . E 5 HOH A 192 792 89 HOH HOH . E 5 HOH A 193 793 6 HOH HOH . E 5 HOH A 194 794 85 HOH HOH . E 5 HOH A 195 795 58 HOH HOH . E 5 HOH A 196 796 125 HOH HOH . E 5 HOH A 197 797 182 HOH HOH . E 5 HOH A 198 798 155 HOH HOH . E 5 HOH A 199 799 313 HOH HOH . E 5 HOH A 200 800 321 HOH HOH . E 5 HOH A 201 801 231 HOH HOH . E 5 HOH A 202 802 83 HOH HOH . E 5 HOH A 203 803 129 HOH HOH . E 5 HOH A 204 804 318 HOH HOH . E 5 HOH A 205 805 63 HOH HOH . E 5 HOH A 206 806 38 HOH HOH . E 5 HOH A 207 807 145 HOH HOH . E 5 HOH A 208 808 211 HOH HOH . E 5 HOH A 209 809 185 HOH HOH . E 5 HOH A 210 810 112 HOH HOH . E 5 HOH A 211 811 151 HOH HOH . E 5 HOH A 212 812 305 HOH HOH . E 5 HOH A 213 813 255 HOH HOH . E 5 HOH A 214 814 223 HOH HOH . E 5 HOH A 215 815 40 HOH HOH . E 5 HOH A 216 816 270 HOH HOH . E 5 HOH A 217 817 177 HOH HOH . E 5 HOH A 218 818 70 HOH HOH . E 5 HOH A 219 819 169 HOH HOH . E 5 HOH A 220 820 170 HOH HOH . E 5 HOH A 221 821 196 HOH HOH . E 5 HOH A 222 822 167 HOH HOH . E 5 HOH A 223 823 266 HOH HOH . E 5 HOH A 224 824 237 HOH HOH . E 5 HOH A 225 825 104 HOH HOH . E 5 HOH A 226 826 219 HOH HOH . E 5 HOH A 227 827 291 HOH HOH . E 5 HOH A 228 828 82 HOH HOH . E 5 HOH A 229 829 181 HOH HOH . E 5 HOH A 230 830 247 HOH HOH . E 5 HOH A 231 831 187 HOH HOH . E 5 HOH A 232 832 197 HOH HOH . E 5 HOH A 233 833 261 HOH HOH . E 5 HOH A 234 834 180 HOH HOH . E 5 HOH A 235 835 158 HOH HOH . E 5 HOH A 236 836 208 HOH HOH . E 5 HOH A 237 837 300 HOH HOH . E 5 HOH A 238 838 289 HOH HOH . E 5 HOH A 239 839 252 HOH HOH . E 5 HOH A 240 840 224 HOH HOH . E 5 HOH A 241 841 226 HOH HOH . E 5 HOH A 242 842 184 HOH HOH . E 5 HOH A 243 843 105 HOH HOH . E 5 HOH A 244 844 310 HOH HOH . E 5 HOH A 245 845 299 HOH HOH . E 5 HOH A 246 846 93 HOH HOH . E 5 HOH A 247 847 189 HOH HOH . E 5 HOH A 248 848 225 HOH HOH . E 5 HOH A 249 849 67 HOH HOH . E 5 HOH A 250 850 188 HOH HOH . E 5 HOH A 251 851 4 HOH HOH . E 5 HOH A 252 852 230 HOH HOH . E 5 HOH A 253 853 171 HOH HOH . E 5 HOH A 254 854 222 HOH HOH . E 5 HOH A 255 855 260 HOH HOH . E 5 HOH A 256 856 249 HOH HOH . E 5 HOH A 257 857 140 HOH HOH . E 5 HOH A 258 858 281 HOH HOH . E 5 HOH A 259 859 173 HOH HOH . E 5 HOH A 260 860 190 HOH HOH . E 5 HOH A 261 861 143 HOH HOH . E 5 HOH A 262 862 278 HOH HOH . E 5 HOH A 263 863 46 HOH HOH . E 5 HOH A 264 864 303 HOH HOH . E 5 HOH A 265 865 191 HOH HOH . E 5 HOH A 266 866 101 HOH HOH . E 5 HOH A 267 867 132 HOH HOH . E 5 HOH A 268 868 254 HOH HOH . E 5 HOH A 269 869 293 HOH HOH . E 5 HOH A 270 870 168 HOH HOH . E 5 HOH A 271 871 262 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . C 3 -13.184 6.213 -21.903 1 29.22 ? P PO4 502 A 1 HETATM 2 O O1 PO4 . . . C 3 -14.051 6.097 -23.121 1 23.25 ? O1 PO4 502 A 1 HETATM 3 O O2 PO4 . . . C 3 -13.923 6.896 -20.791 1 28.6 ? O2 PO4 502 A 1 HETATM 4 O O3 PO4 . . . C 3 -11.952 7.001 -22.231 1 31.43 ? O3 PO4 502 A 1 HETATM 5 O O4 PO4 . . . C 3 -12.796 4.843 -21.454 1 33.73 ? O4 PO4 502 A 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #