data_6P3Y # _model_server_result.job_id ZZJTEgM3pHCMyWoiTcdYFg _model_server_result.datetime_utc '2024-11-07 16:49:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6p3y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":701}' # _entry.id 6P3Y # _exptl.entry_id 6P3Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.37 _cell.angle_gamma 90 _cell.entry_id 6P3Y _cell.length_a 67.695 _cell.length_b 153.849 _cell.length_c 67.728 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6P3Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 72 A HIS 65 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc2 A SG CYS 104 A CYS 97 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? metalc ? metalc3 A SG CYS 107 A CYS 100 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc4 C ZN ZN . A ZN 701 1_555 E O HOH . A HOH 839 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc5 B ND1 HIS 72 B HIS 65 1_555 D ZN ZN . B ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc6 B SG CYS 104 B CYS 97 1_555 D ZN ZN . B ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? metalc ? metalc7 B SG CYS 107 B CYS 100 1_555 D ZN ZN . B ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc8 D ZN ZN . B ZN 701 1_555 F O HOH . B HOH 818 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6P3Y _atom_sites.fract_transf_matrix[1][1] 0.014772 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007323 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0065 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01648 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 701 701 ZN ZN . D 2 ZN B 1 701 701 ZN ZN . E 3 HOH A 1 801 81 HOH HOH . E 3 HOH A 2 802 74 HOH HOH . E 3 HOH A 3 803 7 HOH HOH . E 3 HOH A 4 804 28 HOH HOH . E 3 HOH A 5 805 23 HOH HOH . E 3 HOH A 6 806 55 HOH HOH . E 3 HOH A 7 807 94 HOH HOH . E 3 HOH A 8 808 82 HOH HOH . E 3 HOH A 9 809 49 HOH HOH . E 3 HOH A 10 810 18 HOH HOH . E 3 HOH A 11 811 5 HOH HOH . E 3 HOH A 12 812 47 HOH HOH . E 3 HOH A 13 813 22 HOH HOH . E 3 HOH A 14 814 87 HOH HOH . E 3 HOH A 15 815 41 HOH HOH . E 3 HOH A 16 816 2 HOH HOH . E 3 HOH A 17 817 61 HOH HOH . E 3 HOH A 18 818 6 HOH HOH . E 3 HOH A 19 819 76 HOH HOH . E 3 HOH A 20 820 25 HOH HOH . E 3 HOH A 21 821 24 HOH HOH . E 3 HOH A 22 822 46 HOH HOH . E 3 HOH A 23 823 38 HOH HOH . E 3 HOH A 24 824 86 HOH HOH . E 3 HOH A 25 825 30 HOH HOH . E 3 HOH A 26 826 60 HOH HOH . E 3 HOH A 27 827 51 HOH HOH . E 3 HOH A 28 828 104 HOH HOH . E 3 HOH A 29 829 45 HOH HOH . E 3 HOH A 30 830 68 HOH HOH . E 3 HOH A 31 831 39 HOH HOH . E 3 HOH A 32 832 83 HOH HOH . E 3 HOH A 33 833 69 HOH HOH . E 3 HOH A 34 834 54 HOH HOH . E 3 HOH A 35 835 113 HOH HOH . E 3 HOH A 36 836 50 HOH HOH . E 3 HOH A 37 837 92 HOH HOH . E 3 HOH A 38 838 62 HOH HOH . E 3 HOH A 39 839 71 HOH HOH . E 3 HOH A 40 840 59 HOH HOH . E 3 HOH A 41 841 1 HOH HOH . E 3 HOH A 42 842 10 HOH HOH . E 3 HOH A 43 843 84 HOH HOH . E 3 HOH A 44 844 26 HOH HOH . E 3 HOH A 45 845 100 HOH HOH . E 3 HOH A 46 846 32 HOH HOH . E 3 HOH A 47 847 72 HOH HOH . E 3 HOH A 48 848 65 HOH HOH . E 3 HOH A 49 849 101 HOH HOH . E 3 HOH A 50 850 66 HOH HOH . E 3 HOH A 51 851 52 HOH HOH . E 3 HOH A 52 852 93 HOH HOH . E 3 HOH A 53 853 21 HOH HOH . E 3 HOH A 54 854 19 HOH HOH . E 3 HOH A 55 855 97 HOH HOH . E 3 HOH A 56 856 79 HOH HOH . E 3 HOH A 57 857 105 HOH HOH . E 3 HOH A 58 858 107 HOH HOH . F 3 HOH B 1 801 9 HOH HOH . F 3 HOH B 2 802 88 HOH HOH . F 3 HOH B 3 803 31 HOH HOH . F 3 HOH B 4 804 106 HOH HOH . F 3 HOH B 5 805 108 HOH HOH . F 3 HOH B 6 806 36 HOH HOH . F 3 HOH B 7 807 4 HOH HOH . F 3 HOH B 8 808 20 HOH HOH . F 3 HOH B 9 809 14 HOH HOH . F 3 HOH B 10 810 95 HOH HOH . F 3 HOH B 11 811 3 HOH HOH . F 3 HOH B 12 812 77 HOH HOH . F 3 HOH B 13 813 85 HOH HOH . F 3 HOH B 14 814 12 HOH HOH . F 3 HOH B 15 815 13 HOH HOH . F 3 HOH B 16 816 112 HOH HOH . F 3 HOH B 17 817 58 HOH HOH . F 3 HOH B 18 818 75 HOH HOH . F 3 HOH B 19 819 64 HOH HOH . F 3 HOH B 20 820 8 HOH HOH . F 3 HOH B 21 821 11 HOH HOH . F 3 HOH B 22 822 16 HOH HOH . F 3 HOH B 23 823 78 HOH HOH . F 3 HOH B 24 824 15 HOH HOH . F 3 HOH B 25 825 40 HOH HOH . F 3 HOH B 26 826 48 HOH HOH . F 3 HOH B 27 827 90 HOH HOH . F 3 HOH B 28 828 34 HOH HOH . F 3 HOH B 29 829 42 HOH HOH . F 3 HOH B 30 830 53 HOH HOH . F 3 HOH B 31 831 29 HOH HOH . F 3 HOH B 32 832 33 HOH HOH . F 3 HOH B 33 833 109 HOH HOH . F 3 HOH B 34 834 56 HOH HOH . F 3 HOH B 35 835 63 HOH HOH . F 3 HOH B 36 836 57 HOH HOH . F 3 HOH B 37 837 102 HOH HOH . F 3 HOH B 38 838 17 HOH HOH . F 3 HOH B 39 839 27 HOH HOH . F 3 HOH B 40 840 110 HOH HOH . F 3 HOH B 41 841 103 HOH HOH . F 3 HOH B 42 842 70 HOH HOH . F 3 HOH B 43 843 43 HOH HOH . F 3 HOH B 44 844 96 HOH HOH . F 3 HOH B 45 845 91 HOH HOH . F 3 HOH B 46 846 44 HOH HOH . F 3 HOH B 47 847 99 HOH HOH . F 3 HOH B 48 848 37 HOH HOH . F 3 HOH B 49 849 73 HOH HOH . F 3 HOH B 50 850 89 HOH HOH . F 3 HOH B 51 851 67 HOH HOH . F 3 HOH B 52 852 111 HOH HOH . F 3 HOH B 53 853 35 HOH HOH . F 3 HOH B 54 854 80 HOH HOH . F 3 HOH B 55 855 98 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x -14.718 _atom_site.Cartn_y -15.535 _atom_site.Cartn_z 6.293 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 43.13 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 701 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 218 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #