data_6P74 # _model_server_result.job_id jbQXheHo0P3FYLeJjb5EFA _model_server_result.datetime_utc '2024-11-08 09:55:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6p74 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":612}' # _entry.id 6P74 # _exptl.entry_id 6P74 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6P74 _cell.length_a 83.362 _cell.length_b 101.737 _cell.length_c 202.753 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6P74 _symmetry.cell_setting ? _symmetry.Int_Tables_number 24 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_566 x,-y+1,-z+3/2 1 0 0 0 -1 0 0 0 -1 0 101.737 304.1295 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 L N N ? 4 M N N ? 4 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 431 A ASP 431 1_555 O SM SM . A SM 614 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc2 A OE1 GLU 444 A GLU 444 1_555 O SM SM . A SM 614 7_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc3 A OE2 GLU 444 A GLU 444 1_555 O SM SM . A SM 614 7_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc4 A OE1 GLU 480 A GLU 480 1_555 O SM SM . A SM 614 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.715 ? metalc ? metalc5 A OE2 GLU 480 A GLU 480 1_555 O SM SM . A SM 614 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? metalc ? metalc6 B PT PT . A PT 601 1_555 P O HOH . A HOH 726 1_555 ? L ? ? ? ? ? ? ? ? ? ? 2.734 ? metalc ? metalc7 O SM SM . A SM 614 1_555 P O HOH . A HOH 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.831 ? metalc ? metalc8 O SM SM . A SM 614 1_555 P O HOH . A HOH 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.595 ? metalc ? metalc9 O SM SM . A SM 614 1_555 P O HOH . A HOH 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.608 ? # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 83 n n N1 C6 EPE sing 84 n n N1 C9 EPE sing 85 n n C2 C3 EPE sing 86 n n C2 H21 EPE sing 87 n n C2 H22 EPE sing 88 n n C3 N4 EPE sing 89 n n C3 H31 EPE sing 90 n n C3 H32 EPE sing 91 n n N4 C5 EPE sing 92 n n N4 C7 EPE sing 93 n n C5 C6 EPE sing 94 n n C5 H51 EPE sing 95 n n C5 H52 EPE sing 96 n n C6 H61 EPE sing 97 n n C6 H62 EPE sing 98 n n C7 C8 EPE sing 99 n n C7 H71 EPE sing 100 n n C7 H72 EPE sing 101 n n C8 O8 EPE sing 102 n n C8 H81 EPE sing 103 n n C8 H82 EPE sing 104 n n O8 HO8 EPE sing 105 n n C9 C10 EPE sing 106 n n C9 H91 EPE sing 107 n n C9 H92 EPE sing 108 n n C10 S EPE sing 109 n n C10 H101 EPE sing 110 n n C10 H102 EPE sing 111 n n S O1S EPE doub 112 n n S O2S EPE doub 113 n n S O3S EPE sing 114 n n O3S HOS3 EPE sing 115 n n # _atom_sites.entry_id 6P74 _atom_sites.fract_transf_matrix[1][1] 0.011996 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009829 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004932 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PT A 1 601 2 PT PT . C 2 PT A 1 602 3 PT PT . D 3 SO4 A 1 603 1 SO4 SO4 . E 3 SO4 A 1 604 2 SO4 SO4 . F 3 SO4 A 1 605 3 SO4 SO4 . G 3 SO4 A 1 606 4 SO4 SO4 . H 3 SO4 A 1 607 5 SO4 SO4 . I 3 SO4 A 1 608 7 SO4 SO4 . J 3 SO4 A 1 609 9 SO4 SO4 . K 3 SO4 A 1 610 11 SO4 SO4 . L 4 EPE A 1 611 1 EPE EPE . M 4 EPE A 1 612 2 EPE EPE . N 4 EPE A 1 613 3 EPE EPE . O 5 SM A 1 614 1 SM SM . P 6 HOH A 1 701 55 HOH HOH . P 6 HOH A 2 702 65 HOH HOH . P 6 HOH A 3 703 33 HOH HOH . P 6 HOH A 4 704 31 HOH HOH . P 6 HOH A 5 705 11 HOH HOH . P 6 HOH A 6 706 45 HOH HOH . P 6 HOH A 7 707 12 HOH HOH . P 6 HOH A 8 708 56 HOH HOH . P 6 HOH A 9 709 14 HOH HOH . P 6 HOH A 10 710 70 HOH HOH . P 6 HOH A 11 711 25 HOH HOH . P 6 HOH A 12 712 62 HOH HOH . P 6 HOH A 13 713 34 HOH HOH . P 6 HOH A 14 714 66 HOH HOH . P 6 HOH A 15 715 67 HOH HOH . P 6 HOH A 16 716 71 HOH HOH . P 6 HOH A 17 717 2 HOH HOH . P 6 HOH A 18 718 72 HOH HOH . P 6 HOH A 19 719 57 HOH HOH . P 6 HOH A 20 720 37 HOH HOH . P 6 HOH A 21 721 26 HOH HOH . P 6 HOH A 22 722 23 HOH HOH . P 6 HOH A 23 723 18 HOH HOH . P 6 HOH A 24 724 10 HOH HOH . P 6 HOH A 25 725 16 HOH HOH . P 6 HOH A 26 726 54 HOH HOH . P 6 HOH A 27 727 6 HOH HOH . P 6 HOH A 28 728 30 HOH HOH . P 6 HOH A 29 729 49 HOH HOH . P 6 HOH A 30 730 42 HOH HOH . P 6 HOH A 31 731 27 HOH HOH . P 6 HOH A 32 732 69 HOH HOH . P 6 HOH A 33 733 35 HOH HOH . P 6 HOH A 34 734 7 HOH HOH . P 6 HOH A 35 735 40 HOH HOH . P 6 HOH A 36 736 9 HOH HOH . P 6 HOH A 37 737 19 HOH HOH . P 6 HOH A 38 738 15 HOH HOH . P 6 HOH A 39 739 36 HOH HOH . P 6 HOH A 40 740 29 HOH HOH . P 6 HOH A 41 741 68 HOH HOH . P 6 HOH A 42 742 8 HOH HOH . P 6 HOH A 43 743 39 HOH HOH . P 6 HOH A 44 744 63 HOH HOH . P 6 HOH A 45 745 48 HOH HOH . P 6 HOH A 46 746 58 HOH HOH . P 6 HOH A 47 747 3 HOH HOH . P 6 HOH A 48 748 75 HOH HOH . P 6 HOH A 49 749 78 HOH HOH . P 6 HOH A 50 750 50 HOH HOH . P 6 HOH A 51 751 51 HOH HOH . P 6 HOH A 52 752 5 HOH HOH . P 6 HOH A 53 753 38 HOH HOH . P 6 HOH A 54 754 28 HOH HOH . P 6 HOH A 55 755 64 HOH HOH . P 6 HOH A 56 756 20 HOH HOH . P 6 HOH A 57 757 59 HOH HOH . P 6 HOH A 58 758 24 HOH HOH . P 6 HOH A 59 759 22 HOH HOH . P 6 HOH A 60 760 76 HOH HOH . P 6 HOH A 61 761 73 HOH HOH . P 6 HOH A 62 762 77 HOH HOH . P 6 HOH A 63 763 74 HOH HOH . P 6 HOH A 64 764 43 HOH HOH . P 6 HOH A 65 765 46 HOH HOH . P 6 HOH A 66 766 47 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . M 4 50.821 45.852 117.605 1 184.24 ? N1 EPE 612 A 1 HETATM 2 C C2 EPE . . . M 4 49.591 46.638 117.862 1 178.73 ? C2 EPE 612 A 1 HETATM 3 C C3 EPE . . . M 4 49.844 48.056 118.394 1 173.52 ? C3 EPE 612 A 1 HETATM 4 N N4 EPE . . . M 4 50.831 48.104 119.461 1 168.16 ? N4 EPE 612 A 1 HETATM 5 C C5 EPE . . . M 4 52.052 47.379 119.181 1 177.89 ? C5 EPE 612 A 1 HETATM 6 C C6 EPE . . . M 4 51.745 45.942 118.755 1 182.44 ? C6 EPE 612 A 1 HETATM 7 C C7 EPE . . . M 4 50.819 49.166 120.471 1 148.29 ? C7 EPE 612 A 1 HETATM 8 C C8 EPE . . . M 4 51.473 48.77 121.799 1 126.99 ? C8 EPE 612 A 1 HETATM 9 O O8 EPE . . . M 4 51.321 49.758 122.801 1 104.77 ? O8 EPE 612 A 1 HETATM 10 C C9 EPE . . . M 4 50.466 44.415 117.458 1 189.62 ? C9 EPE 612 A 1 HETATM 11 C C10 EPE . . . M 4 51.247 43.687 116.352 1 192.89 ? C10 EPE 612 A 1 HETATM 12 S S EPE . . . M 4 51.29 41.856 116.428 1 193.48 ? S EPE 612 A 1 HETATM 13 O O1S EPE . . . M 4 49.97 41.322 116.745 1 195.61 ? O1S EPE 612 A 1 HETATM 14 O O2S EPE . . . M 4 51.714 41.3 115.143 1 193.36 ? O2S EPE 612 A 1 HETATM 15 O O3S EPE . . . M 4 52.237 41.393 117.44 1 195.11 ? O3S EPE 612 A 1 HETATM 16 H H21 EPE . . . M 4 48.979 46.1 118.586 1 214.08 ? H21 EPE 612 A 1 HETATM 17 H H22 EPE . . . M 4 49.025 46.711 116.933 1 214.08 ? H22 EPE 612 A 1 HETATM 18 H H31 EPE . . . M 4 48.905 48.466 118.764 1 207.83 ? H31 EPE 612 A 1 HETATM 19 H H32 EPE . . . M 4 50.183 48.686 117.571 1 207.83 ? H32 EPE 612 A 1 HETATM 20 H H51 EPE . . . M 4 52.682 47.369 120.071 1 213.07 ? H51 EPE 612 A 1 HETATM 21 H H52 EPE . . . M 4 52.602 47.885 118.387 1 213.07 ? H52 EPE 612 A 1 HETATM 22 H H61 EPE . . . M 4 51.308 45.41 119.6 1 218.53 ? H61 EPE 612 A 1 HETATM 23 H H62 EPE . . . M 4 52.68 45.445 118.494 1 218.53 ? H62 EPE 612 A 1 HETATM 24 H H71 EPE . . . M 4 49.785 49.454 120.663 1 177.55 ? H71 EPE 612 A 1 HETATM 25 H H72 EPE . . . M 4 51.34 50.036 120.07 1 177.55 ? H72 EPE 612 A 1 HETATM 26 H H81 EPE . . . M 4 52.536 48.594 121.633 1 151.99 ? H81 EPE 612 A 1 HETATM 27 H H82 EPE . . . M 4 51.03 47.838 122.149 1 151.99 ? H82 EPE 612 A 1 HETATM 28 H HO8 EPE . . . M 4 50.367 49.933 122.944 1 125.33 ? HO8 EPE 612 A 1 HETATM 29 H H91 EPE . . . M 4 50.653 43.911 118.407 1 227.14 ? H91 EPE 612 A 1 HETATM 30 H H92 EPE . . . M 4 49.401 44.338 117.242 1 227.14 ? H92 EPE 612 A 1 HETATM 31 H H101 EPE . . . M 4 50.813 43.971 115.393 1 231.07 ? H101 EPE 612 A 1 HETATM 32 H H102 EPE . . . M 4 52.275 44.047 116.375 1 231.07 ? H102 EPE 612 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 338 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 32 #