data_6P8Y # _model_server_result.job_id 4ELDIagz1l1bdWFaOvAuhA _model_server_result.datetime_utc '2024-12-05 04:28:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6p8y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":303}' # _entry.id 6P8Y # _exptl.entry_id 6P8Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 553.448 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[5-bromo-3-(5-methoxy-3,4-dihydroisoquinoline-2(1H)-carbonyl)-1H-indol-1-yl]-N-(1-propanoylazetidin-3-yl)acetamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.9 _cell.angle_gamma 90 _cell.entry_id 6P8Y _cell.length_a 33.756 _cell.length_b 106.045 _cell.length_c 39.9 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6P8Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 26 A CYS 12 1_555 E C01 O5Y . A O5Y 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.81 ? covale ? covale2 B SG CYS 26 B CYS 12 1_555 H C01 O5Y . B O5Y 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.807 ? metalc ? metalc1 A OG SER 31 A SER 17 1_555 C MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc2 C MG MG . A MG 301 1_555 D O2B GDP . A GDP 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? metalc ? metalc3 C MG MG . A MG 301 1_555 I O HOH . A HOH 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc4 C MG MG . A MG 301 1_555 I O HOH . A HOH 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? metalc ? metalc5 C MG MG . A MG 301 1_555 I O HOH . A HOH 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc6 C MG MG . A MG 301 1_555 I O HOH . A HOH 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc7 B OG SER 31 B SER 17 1_555 F MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc8 F MG MG . B MG 301 1_555 G O1B GDP . B GDP 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc9 F MG MG . B MG 301 1_555 J O HOH . B HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc10 F MG MG . B MG 301 1_555 J O HOH . B HOH 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc11 F MG MG . B MG 301 1_555 J O HOH . B HOH 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc12 F MG MG . B MG 301 1_555 J O HOH . B HOH 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? # _chem_comp.formula 'C27 H29 Br N4 O4' _chem_comp.formula_weight 553.448 _chem_comp.id O5Y _chem_comp.mon_nstd_flag . _chem_comp.name 2-[5-bromo-3-(5-methoxy-3,4-dihydroisoquinoline-2(1H)-carbonyl)-1H-indol-1-yl]-N-(1-propanoylazetidin-3-yl)acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C02 O5Y sing 282 n n C02 C03 O5Y sing 283 n n C08 N05 O5Y sing 284 n n C08 C07 O5Y sing 285 n n C03 N05 O5Y sing 286 n n C03 O04 O5Y doub 287 n n N05 C06 O5Y sing 288 n n C07 C06 O5Y sing 289 n n C07 N09 O5Y sing 290 n n C24 O23 O5Y sing 291 n n N09 C10 O5Y sing 292 n n O23 C22 O5Y sing 293 n n C10 O11 O5Y doub 294 n n C10 C12 O5Y sing 295 n n C22 C25 O5Y doub 296 n y C22 C21 O5Y sing 297 n y C25 C26 O5Y sing 298 n y C20 C21 O5Y sing 299 n n C20 C19 O5Y sing 300 n n C12 N13 O5Y sing 301 n n C21 C28 O5Y doub 302 n y C19 N18 O5Y sing 303 n n C26 C27 O5Y doub 304 n y N13 C14 O5Y sing 305 n y N13 C36 O5Y sing 306 n y C14 C15 O5Y doub 307 n y C28 C27 O5Y sing 308 n y C28 C29 O5Y sing 309 n n N18 C29 O5Y sing 310 n n N18 C16 O5Y sing 311 n n C36 C35 O5Y doub 312 n y C36 C30 O5Y sing 313 n y C15 C16 O5Y sing 314 n n C15 C30 O5Y sing 315 n y C35 C34 O5Y sing 316 n y C16 O17 O5Y doub 317 n n C30 C31 O5Y doub 318 n y C34 C32 O5Y doub 319 n y C31 C32 O5Y sing 320 n y C32 BR33 O5Y sing 321 n n C01 H1 O5Y sing 322 n n C01 H2 O5Y sing 323 n n C01 H3 O5Y sing 324 n n C02 H4 O5Y sing 325 n n C02 H5 O5Y sing 326 n n C06 H6 O5Y sing 327 n n C06 H7 O5Y sing 328 n n C07 H8 O5Y sing 329 n n C08 H9 O5Y sing 330 n n C08 H10 O5Y sing 331 n n N09 H11 O5Y sing 332 n n C12 H12 O5Y sing 333 n n C12 H13 O5Y sing 334 n n C14 H14 O5Y sing 335 n n C19 H15 O5Y sing 336 n n C19 H16 O5Y sing 337 n n C20 H17 O5Y sing 338 n n C20 H18 O5Y sing 339 n n C24 H19 O5Y sing 340 n n C24 H20 O5Y sing 341 n n C24 H21 O5Y sing 342 n n C25 H22 O5Y sing 343 n n C26 H23 O5Y sing 344 n n C27 H24 O5Y sing 345 n n C29 H25 O5Y sing 346 n n C29 H26 O5Y sing 347 n n C31 H27 O5Y sing 348 n n C34 H28 O5Y sing 349 n n C35 H29 O5Y sing 350 n n # _atom_sites.entry_id 6P8Y _atom_sites.fract_transf_matrix[1][1] 0.029624 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00202 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00943 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025121 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 301 301 MG MG . D 3 GDP A 1 302 501 GDP GDP . E 4 O5Y A 1 303 701 O5Y UNL . F 2 MG B 1 301 301 MG MG . G 3 GDP B 1 302 501 GDP GDP . H 4 O5Y B 1 303 701 O5Y UNL . I 5 HOH A 1 401 21 HOH HOH . I 5 HOH A 2 402 1 HOH HOH . I 5 HOH A 3 403 9 HOH HOH . I 5 HOH A 4 404 10 HOH HOH . I 5 HOH A 5 405 7 HOH HOH . I 5 HOH A 6 406 6 HOH HOH . I 5 HOH A 7 407 401 HOH HOH . I 5 HOH A 8 408 19 HOH HOH . I 5 HOH A 9 409 11 HOH HOH . I 5 HOH A 10 410 3 HOH HOH . I 5 HOH A 11 411 404 HOH HOH . I 5 HOH A 12 412 22 HOH HOH . I 5 HOH A 13 413 2 HOH HOH . I 5 HOH A 14 414 403 HOH HOH . I 5 HOH A 15 415 18 HOH HOH . I 5 HOH A 16 416 402 HOH HOH . I 5 HOH A 17 417 20 HOH HOH . I 5 HOH A 18 418 4 HOH HOH . I 5 HOH A 19 419 12 HOH HOH . I 5 HOH A 20 420 5 HOH HOH . J 5 HOH B 1 401 401 HOH HOH . J 5 HOH B 2 402 15 HOH HOH . J 5 HOH B 3 403 16 HOH HOH . J 5 HOH B 4 404 403 HOH HOH . J 5 HOH B 5 405 13 HOH HOH . J 5 HOH B 6 406 8 HOH HOH . J 5 HOH B 7 407 14 HOH HOH . J 5 HOH B 8 408 404 HOH HOH . J 5 HOH B 9 409 402 HOH HOH . J 5 HOH B 10 410 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 O5Y . . . H 4 8.485 28.611 30.41 1 48.45 ? C01 O5Y 303 B 1 HETATM 2 C C02 O5Y . . . H 4 9.08 29.202 29.134 1 50.68 ? C02 O5Y 303 B 1 HETATM 3 C C03 O5Y . . . H 4 9.047 28.268 27.912 1 50.78 ? C03 O5Y 303 B 1 HETATM 4 O O04 O5Y . . . H 4 10.061 28.009 27.353 1 51.24 ? O04 O5Y 303 B 1 HETATM 5 N N05 O5Y . . . H 4 7.798 27.699 27.413 1 52.29 ? N05 O5Y 303 B 1 HETATM 6 C C06 O5Y . . . H 4 6.357 27.768 27.809 1 53.33 ? C06 O5Y 303 B 1 HETATM 7 C C07 O5Y . . . H 4 6.008 26.834 26.709 1 53.72 ? C07 O5Y 303 B 1 HETATM 8 C C08 O5Y . . . H 4 7.432 26.793 26.281 1 52.13 ? C08 O5Y 303 B 1 HETATM 9 N N09 O5Y . . . H 4 5.116 27.461 25.723 1 54.62 ? N09 O5Y 303 B 1 HETATM 10 C C10 O5Y . . . H 4 4.581 26.688 24.595 1 54.28 ? C10 O5Y 303 B 1 HETATM 11 O O11 O5Y . . . H 4 4.874 25.545 24.468 1 53.87 ? O11 O5Y 303 B 1 HETATM 12 C C12 O5Y . . . H 4 3.639 27.368 23.579 1 54.51 ? C12 O5Y 303 B 1 HETATM 13 N N13 O5Y . . . H 4 3.116 26.348 22.668 1 55.37 ? N13 O5Y 303 B 1 HETATM 14 C C14 O5Y . . . H 4 1.956 25.716 22.818 1 55.54 ? C14 O5Y 303 B 1 HETATM 15 C C15 O5Y . . . H 4 1.81 24.81 21.76 1 55.87 ? C15 O5Y 303 B 1 HETATM 16 C C16 O5Y . . . H 4 0.607 23.861 21.538 1 55.27 ? C16 O5Y 303 B 1 HETATM 17 O O17 O5Y . . . H 4 -0.441 24.319 21.227 1 56.53 ? O17 O5Y 303 B 1 HETATM 18 N N18 O5Y . . . H 4 0.754 22.417 21.719 1 54.54 ? N18 O5Y 303 B 1 HETATM 19 C C19 O5Y . . . H 4 -0.36 21.47 21.555 1 53.92 ? C19 O5Y 303 B 1 HETATM 20 C C20 O5Y . . . H 4 -0.68 20.783 22.88 1 53.86 ? C20 O5Y 303 B 1 HETATM 21 C C21 O5Y . . . H 4 0.538 20.498 23.769 1 53.53 ? C21 O5Y 303 B 1 HETATM 22 C C22 O5Y . . . H 4 0.367 19.755 24.986 1 53.08 ? C22 O5Y 303 B 1 HETATM 23 O O23 O5Y . . . H 4 -0.914 19.297 25.347 1 53.64 ? O23 O5Y 303 B 1 HETATM 24 C C24 O5Y . . . H 4 -1.022 18.649 26.589 1 53.69 ? C24 O5Y 303 B 1 HETATM 25 C C25 O5Y . . . H 4 1.474 19.491 25.796 1 52.56 ? C25 O5Y 303 B 1 HETATM 26 C C26 O5Y . . . H 4 2.742 19.942 25.44 1 52.45 ? C26 O5Y 303 B 1 HETATM 27 C C27 O5Y . . . H 4 2.914 20.666 24.262 1 52.81 ? C27 O5Y 303 B 1 HETATM 28 C C28 O5Y . . . H 4 1.786 20.936 23.427 1 53.31 ? C28 O5Y 303 B 1 HETATM 29 C C29 O5Y . . . H 4 2.018 21.757 22.123 1 53.73 ? C29 O5Y 303 B 1 HETATM 30 C C30 O5Y . . . H 4 2.975 24.932 20.956 1 56.25 ? C30 O5Y 303 B 1 HETATM 31 C C31 O5Y . . . H 4 3.411 24.294 19.771 1 57.94 ? C31 O5Y 303 B 1 HETATM 32 C C32 O5Y . . . H 4 4.646 24.655 19.222 1 59.53 ? C32 O5Y 303 B 1 HETATM 33 BR BR33 O5Y . . . H 4 5.257 23.793 17.599 1 66.65 ? BR33 O5Y 303 B 1 HETATM 34 C C34 O5Y . . . H 4 5.449 25.634 19.83 1 58.56 ? C34 O5Y 303 B 1 HETATM 35 C C35 O5Y . . . H 4 5.018 26.262 20.996 1 56.15 ? C35 O5Y 303 B 1 HETATM 36 C C36 O5Y . . . H 4 3.761 25.898 21.559 1 55.57 ? C36 O5Y 303 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 338 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 36 #