data_6P99 # _model_server_result.job_id BPSIKJXFame9DHCWUPY1eg _model_server_result.datetime_utc '2024-11-05 06:59:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6p99 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":504}' # _entry.id 6P99 # _exptl.entry_id 6P99 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6P99 _cell.length_a 71.883 _cell.length_b 76.822 _cell.length_c 101.247 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6P99 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 37 A GLU 37 1_555 G CA CA . A CA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc2 A OE2 GLU 37 A GLU 37 1_555 G CA CA . A CA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc3 A OE2 GLU 37 A GLU 37 1_555 I CD CD . A CD 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.563 ? metalc ? metalc4 A NE2 HIS 38 A HIS 38 1_555 I CD CD . A CD 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? metalc ? metalc5 A OE1 GLU 125 A GLU 125 1_555 I CD CD . A CD 507 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.698 ? metalc ? metalc6 A OE2 GLU 125 A GLU 125 1_555 I CD CD . A CD 507 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? metalc ? metalc7 A OD1 ASP 143 A ASP 143 1_555 F CA CA . A CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc8 A OE1 GLU 147 A GLU 147 1_555 F CA CA . A CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc9 A OE1 GLU 147 A GLU 147 1_555 H CD CD . A CD 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.661 ? metalc ? metalc10 A OE2 GLU 147 A GLU 147 1_555 H CD CD . A CD 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc11 A OE1 GLU 216 A GLU 216 1_555 L CA CA . B CA 302 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.768 ? metalc ? metalc12 A OE2 GLU 216 A GLU 216 1_555 L CA CA . B CA 302 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? metalc ? metalc13 A OE1 GLU 256 A GLU 256 1_555 G CA CA . A CA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc14 A OE2 GLU 256 A GLU 256 1_555 I CD CD . A CD 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? metalc ? metalc15 F CA CA . A CA 504 3_554 B OD1 ASP 143 B ASP 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? metalc ? metalc16 F CA CA . A CA 504 3_554 B OE1 GLU 147 B GLU 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc17 F CA CA . A CA 504 3_554 B OE2 GLU 147 B GLU 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.77 ? metalc ? metalc18 G CA CA . A CA 505 1_555 M O HOH . A HOH 625 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc19 H CD CD . A CD 506 1_555 M O HOH . A HOH 639 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.549 ? metalc ? metalc20 H CD CD . A CD 506 3_554 B OD1 ASP 143 B ASP 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.653 ? metalc ? metalc21 I CD CD . A CD 507 1_555 M O HOH . A HOH 625 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? metalc ? metalc22 B OE1 GLU 37 B GLU 37 1_555 L CA CA . B CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc23 B OE2 GLU 37 B GLU 37 1_555 L CA CA . B CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc24 B OE1 GLU 256 B GLU 256 1_555 L CA CA . B CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6P99 _atom_sites.fract_transf_matrix[1][1] 0.013911 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013017 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009877 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 1RG A 1 501 501 1RG ERT . D 3 CL A 1 502 1 CL CL . E 3 CL A 1 503 3 CL CL . F 4 CA A 1 504 1 CA CA . G 4 CA A 1 505 2 CA CA . H 5 CD A 1 506 1 CD CD . I 5 CD A 1 507 2 CD CD . J 5 CD A 1 508 4 CD CD . K 3 CL B 1 301 2 CL CL . L 4 CA B 1 302 3 CA CA . M 6 HOH A 1 601 50 HOH HOH . M 6 HOH A 2 602 31 HOH HOH . M 6 HOH A 3 603 117 HOH HOH . M 6 HOH A 4 604 18 HOH HOH . M 6 HOH A 5 605 116 HOH HOH . M 6 HOH A 6 606 30 HOH HOH . M 6 HOH A 7 607 114 HOH HOH . M 6 HOH A 8 608 104 HOH HOH . M 6 HOH A 9 609 60 HOH HOH . M 6 HOH A 10 610 47 HOH HOH . M 6 HOH A 11 611 4 HOH HOH . M 6 HOH A 12 612 53 HOH HOH . M 6 HOH A 13 613 123 HOH HOH . M 6 HOH A 14 614 61 HOH HOH . M 6 HOH A 15 615 100 HOH HOH . M 6 HOH A 16 616 1 HOH HOH . M 6 HOH A 17 617 69 HOH HOH . M 6 HOH A 18 618 97 HOH HOH . M 6 HOH A 19 619 64 HOH HOH . M 6 HOH A 20 620 91 HOH HOH . M 6 HOH A 21 621 45 HOH HOH . M 6 HOH A 22 622 12 HOH HOH . M 6 HOH A 23 623 52 HOH HOH . M 6 HOH A 24 624 14 HOH HOH . M 6 HOH A 25 625 111 HOH HOH . M 6 HOH A 26 626 109 HOH HOH . M 6 HOH A 27 627 73 HOH HOH . M 6 HOH A 28 628 8 HOH HOH . M 6 HOH A 29 629 81 HOH HOH . M 6 HOH A 30 630 17 HOH HOH . M 6 HOH A 31 631 76 HOH HOH . M 6 HOH A 32 632 98 HOH HOH . M 6 HOH A 33 633 48 HOH HOH . M 6 HOH A 34 634 63 HOH HOH . M 6 HOH A 35 635 99 HOH HOH . M 6 HOH A 36 636 42 HOH HOH . M 6 HOH A 37 637 11 HOH HOH . M 6 HOH A 38 638 57 HOH HOH . M 6 HOH A 39 639 110 HOH HOH . M 6 HOH A 40 640 87 HOH HOH . M 6 HOH A 41 641 44 HOH HOH . M 6 HOH A 42 642 34 HOH HOH . M 6 HOH A 43 643 95 HOH HOH . N 6 HOH B 1 401 106 HOH HOH . N 6 HOH B 2 402 105 HOH HOH . N 6 HOH B 3 403 113 HOH HOH . N 6 HOH B 4 404 67 HOH HOH . N 6 HOH B 5 405 20 HOH HOH . N 6 HOH B 6 406 115 HOH HOH . N 6 HOH B 7 407 23 HOH HOH . N 6 HOH B 8 408 40 HOH HOH . N 6 HOH B 9 409 28 HOH HOH . N 6 HOH B 10 410 19 HOH HOH . N 6 HOH B 11 411 7 HOH HOH . N 6 HOH B 12 412 107 HOH HOH . N 6 HOH B 13 413 6 HOH HOH . N 6 HOH B 14 414 35 HOH HOH . N 6 HOH B 15 415 74 HOH HOH . N 6 HOH B 16 416 121 HOH HOH . N 6 HOH B 17 417 55 HOH HOH . N 6 HOH B 18 418 103 HOH HOH . N 6 HOH B 19 419 118 HOH HOH . N 6 HOH B 20 420 16 HOH HOH . N 6 HOH B 21 421 125 HOH HOH . N 6 HOH B 22 422 92 HOH HOH . N 6 HOH B 23 423 88 HOH HOH . N 6 HOH B 24 424 9 HOH HOH . N 6 HOH B 25 425 22 HOH HOH . N 6 HOH B 26 426 77 HOH HOH . N 6 HOH B 27 427 43 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x -8.736 _atom_site.Cartn_y -38 _atom_site.Cartn_z -8.016 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 37.66 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 504 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #