data_6P9J # _model_server_result.job_id nsKZTubMvn-321MH2rg7dQ _model_server_result.datetime_utc '2024-10-19 03:53:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6p9j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 6P9J # _exptl.entry_id 6P9J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 163.215 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRIS(HYDROXYETHYL)AMINOMETHANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.41 _cell.angle_gamma 90 _cell.entry_id 6P9J _cell.length_a 57.827 _cell.length_b 66.039 _cell.length_c 112.329 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6P9J _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G 1 1 C,D,H,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 H CYS 22 1_555 A SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf2 A SG CYS 101 H CYS 101 1_555 A SG CYS 106 H CYS 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 A SG CYS 156 H CYS 156 1_555 A SG CYS 212 H CYS 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf4 B SG CYS 22 L CYS 22 1_555 B SG CYS 90 L CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf5 B SG CYS 138 L CYS 138 1_555 B SG CYS 197 L CYS 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf6 C SG CYS 22 A CYS 22 1_555 C SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf7 C SG CYS 101 A CYS 101 1_555 C SG CYS 106 A CYS 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf8 C SG CYS 156 A CYS 156 1_555 C SG CYS 212 A CYS 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf9 D SG CYS 22 B CYS 22 1_555 D SG CYS 90 B CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf10 D SG CYS 138 B CYS 138 1_555 D SG CYS 197 B CYS 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? # _chem_comp.formula 'C7 H17 N O3' _chem_comp.formula_weight 163.215 _chem_comp.id TAM _chem_comp.mon_nstd_flag . _chem_comp.name TRIS(HYDROXYETHYL)AMINOMETHANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TAM sing 290 n n C C2 TAM sing 291 n n C C3 TAM sing 292 n n C N TAM sing 293 n n C1 C4 TAM sing 294 n n C1 H11 TAM sing 295 n n C1 H12 TAM sing 296 n n C2 C5 TAM sing 297 n n C2 H21 TAM sing 298 n n C2 H22 TAM sing 299 n n C3 C6 TAM sing 300 n n C3 H31 TAM sing 301 n n C3 H32 TAM sing 302 n n C4 O4 TAM sing 303 n n C4 H41 TAM sing 304 n n C4 H42 TAM sing 305 n n C5 O5 TAM sing 306 n n C5 H51 TAM sing 307 n n C5 H52 TAM sing 308 n n C6 O6 TAM sing 309 n n C6 H61 TAM sing 310 n n C6 H62 TAM sing 311 n n N HN1 TAM sing 312 n n N HN2 TAM sing 313 n n O4 HO4 TAM sing 314 n n O5 HO5 TAM sing 315 n n O6 HO6 TAM sing 316 n n # _atom_sites.entry_id 6P9J _atom_sites.fract_transf_matrix[1][1] 0.017293 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001944 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015143 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008958 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 TAM H 1 301 301 TAM TAM . F 4 HOH H 1 401 22 HOH HOH . F 4 HOH H 2 402 74 HOH HOH . F 4 HOH H 3 403 13 HOH HOH . F 4 HOH H 4 404 19 HOH HOH . F 4 HOH H 5 405 28 HOH HOH . F 4 HOH H 6 406 76 HOH HOH . F 4 HOH H 7 407 5 HOH HOH . F 4 HOH H 8 408 6 HOH HOH . F 4 HOH H 9 409 49 HOH HOH . F 4 HOH H 10 410 77 HOH HOH . F 4 HOH H 11 411 18 HOH HOH . F 4 HOH H 12 412 27 HOH HOH . F 4 HOH H 13 413 8 HOH HOH . F 4 HOH H 14 414 4 HOH HOH . F 4 HOH H 15 415 7 HOH HOH . F 4 HOH H 16 416 3 HOH HOH . F 4 HOH H 17 417 9 HOH HOH . F 4 HOH H 18 418 12 HOH HOH . F 4 HOH H 19 419 20 HOH HOH . F 4 HOH H 20 420 26 HOH HOH . F 4 HOH H 21 421 15 HOH HOH . F 4 HOH H 22 422 17 HOH HOH . F 4 HOH H 23 423 75 HOH HOH . F 4 HOH H 24 424 1 HOH HOH . F 4 HOH H 25 425 2 HOH HOH . F 4 HOH H 26 426 21 HOH HOH . F 4 HOH H 27 427 50 HOH HOH . F 4 HOH H 28 428 10 HOH HOH . F 4 HOH H 29 429 16 HOH HOH . F 4 HOH H 30 430 11 HOH HOH . F 4 HOH H 31 431 23 HOH HOH . G 4 HOH L 1 301 29 HOH HOH . G 4 HOH L 2 302 78 HOH HOH . G 4 HOH L 3 303 55 HOH HOH . G 4 HOH L 4 304 14 HOH HOH . G 4 HOH L 5 305 30 HOH HOH . G 4 HOH L 6 306 54 HOH HOH . G 4 HOH L 7 307 31 HOH HOH . G 4 HOH L 8 308 53 HOH HOH . G 4 HOH L 9 309 56 HOH HOH . G 4 HOH L 10 310 79 HOH HOH . G 4 HOH L 11 311 52 HOH HOH . G 4 HOH L 12 312 32 HOH HOH . G 4 HOH L 13 313 51 HOH HOH . G 4 HOH L 14 314 25 HOH HOH . H 4 HOH A 1 301 39 HOH HOH . H 4 HOH A 2 302 41 HOH HOH . H 4 HOH A 3 303 43 HOH HOH . H 4 HOH A 4 304 57 HOH HOH . H 4 HOH A 5 305 47 HOH HOH . H 4 HOH A 6 306 60 HOH HOH . H 4 HOH A 7 307 34 HOH HOH . H 4 HOH A 8 308 73 HOH HOH . H 4 HOH A 9 309 81 HOH HOH . H 4 HOH A 10 310 46 HOH HOH . H 4 HOH A 11 311 44 HOH HOH . H 4 HOH A 12 312 33 HOH HOH . H 4 HOH A 13 313 42 HOH HOH . H 4 HOH A 14 314 72 HOH HOH . H 4 HOH A 15 315 48 HOH HOH . H 4 HOH A 16 316 35 HOH HOH . H 4 HOH A 17 317 45 HOH HOH . I 4 HOH B 1 301 59 HOH HOH . I 4 HOH B 2 302 65 HOH HOH . I 4 HOH B 3 303 69 HOH HOH . I 4 HOH B 4 304 37 HOH HOH . I 4 HOH B 5 305 36 HOH HOH . I 4 HOH B 6 306 63 HOH HOH . I 4 HOH B 7 307 67 HOH HOH . I 4 HOH B 8 308 66 HOH HOH . I 4 HOH B 9 309 61 HOH HOH . I 4 HOH B 10 310 70 HOH HOH . I 4 HOH B 11 311 58 HOH HOH . I 4 HOH B 12 312 64 HOH HOH . I 4 HOH B 13 313 80 HOH HOH . I 4 HOH B 14 314 71 HOH HOH . I 4 HOH B 15 315 68 HOH HOH . I 4 HOH B 16 316 38 HOH HOH . I 4 HOH B 17 317 62 HOH HOH . I 4 HOH B 18 318 40 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TAM . . . E 3 21.698 11.778 24.727 1 69.08 ? C TAM 301 H 1 HETATM 2 C C1 TAM . . . E 3 21.078 13.046 24.081 1 68.04 ? C1 TAM 301 H 1 HETATM 3 C C2 TAM . . . E 3 21.35 10.512 23.911 1 65.61 ? C2 TAM 301 H 1 HETATM 4 C C3 TAM . . . E 3 23.246 11.941 24.788 1 66.1 ? C3 TAM 301 H 1 HETATM 5 C C4 TAM . . . E 3 21.315 14.25 25.015 1 63.75 ? C4 TAM 301 H 1 HETATM 6 C C5 TAM . . . E 3 21.796 9.297 24.739 1 64.93 ? C5 TAM 301 H 1 HETATM 7 C C6 TAM . . . E 3 23.89 11.656 23.417 1 59.14 ? C6 TAM 301 H 1 HETATM 8 N N TAM . . . E 3 21.152 11.606 26.053 1 58.16 ? N TAM 301 H 1 HETATM 9 O O4 TAM . . . E 3 20.122 14.604 25.699 1 54.5 ? O4 TAM 301 H 1 HETATM 10 O O5 TAM . . . E 3 22.058 8.205 23.886 1 66.21 ? O5 TAM 301 H 1 HETATM 11 O O6 TAM . . . E 3 24.699 12.734 22.981 1 69.1 ? O6 TAM 301 H 1 # _model_server_stats.io_time_ms 77 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #