data_6P9L # _model_server_result.job_id E4-VV00offMHSLWUTYXm-Q _model_server_result.datetime_utc '2024-11-01 03:42:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6p9l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":505}' # _entry.id 6P9L # _exptl.entry_id 6P9L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.095 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ISOPROPYL ALCOHOL' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6P9L _cell.length_a 77.804 _cell.length_b 77.804 _cell.length_c 146.374 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6P9L _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_554 x-y,-y,-z-1/3 1 0 0 0 -1 0 0 0 -1 0 0 -48.791333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N ? 5 G N N ? 5 H N N ? 5 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASN 307 A ASN 309 1_555 C NA NA . A NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.532 ? metalc ? metalc2 A OD1 ASN 307 A ASN 309 1_555 C NA NA . A NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc3 A O ALA 308 A ALA 310 1_555 C NA NA . A NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.614 ? metalc ? metalc4 A OE2 GLU 352 A GLU 354 1_555 C NA NA . A NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc5 A OD1 ASN 397 A ASN 399 1_555 C NA NA . A NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc6 A O ASN 398 A ASN 400 1_555 C NA NA . A NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.869 ? # _chem_comp.formula 'C3 H8 O' _chem_comp.formula_weight 60.095 _chem_comp.id IPA _chem_comp.mon_nstd_flag . _chem_comp.name 'ISOPROPYL ALCOHOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 2-PROPANOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IPA sing 186 n n C1 H11 IPA sing 187 n n C1 H12 IPA sing 188 n n C1 H13 IPA sing 189 n n C2 C3 IPA sing 190 n n C2 O2 IPA sing 191 n n C2 H2 IPA sing 192 n n C3 H31 IPA sing 193 n n C3 H32 IPA sing 194 n n C3 H33 IPA sing 195 n n O2 HO2 IPA sing 196 n n # _atom_sites.entry_id 6P9L _atom_sites.fract_transf_matrix[1][1] 0.012853 _atom_sites.fract_transf_matrix[1][2] 0.007421 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014841 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006832 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 JFX A 1 501 1 JFX JFX . C 3 NA A 1 502 1 NA NA . D 4 GOL A 1 503 1 GOL GOL . E 5 IPA A 1 504 1 IPA IPA . F 5 IPA A 1 505 2 IPA IPA . G 5 IPA A 1 506 3 IPA IPA . H 5 IPA A 1 507 4 IPA IPA . I 5 IPA A 1 508 5 IPA IPA . J 6 HOH A 1 601 64 HOH HOH . J 6 HOH A 2 602 77 HOH HOH . J 6 HOH A 3 603 32 HOH HOH . J 6 HOH A 4 604 14 HOH HOH . J 6 HOH A 5 605 69 HOH HOH . J 6 HOH A 6 606 56 HOH HOH . J 6 HOH A 7 607 7 HOH HOH . J 6 HOH A 8 608 27 HOH HOH . J 6 HOH A 9 609 23 HOH HOH . J 6 HOH A 10 610 11 HOH HOH . J 6 HOH A 11 611 37 HOH HOH . J 6 HOH A 12 612 22 HOH HOH . J 6 HOH A 13 613 71 HOH HOH . J 6 HOH A 14 614 66 HOH HOH . J 6 HOH A 15 615 18 HOH HOH . J 6 HOH A 16 616 63 HOH HOH . J 6 HOH A 17 617 53 HOH HOH . J 6 HOH A 18 618 28 HOH HOH . J 6 HOH A 19 619 33 HOH HOH . J 6 HOH A 20 620 44 HOH HOH . J 6 HOH A 21 621 8 HOH HOH . J 6 HOH A 22 622 72 HOH HOH . J 6 HOH A 23 623 26 HOH HOH . J 6 HOH A 24 624 46 HOH HOH . J 6 HOH A 25 625 9 HOH HOH . J 6 HOH A 26 626 52 HOH HOH . J 6 HOH A 27 627 25 HOH HOH . J 6 HOH A 28 628 2 HOH HOH . J 6 HOH A 29 629 73 HOH HOH . J 6 HOH A 30 630 29 HOH HOH . J 6 HOH A 31 631 20 HOH HOH . J 6 HOH A 32 632 19 HOH HOH . J 6 HOH A 33 633 51 HOH HOH . J 6 HOH A 34 634 70 HOH HOH . J 6 HOH A 35 635 75 HOH HOH . J 6 HOH A 36 636 30 HOH HOH . J 6 HOH A 37 637 38 HOH HOH . J 6 HOH A 38 638 10 HOH HOH . J 6 HOH A 39 639 17 HOH HOH . J 6 HOH A 40 640 34 HOH HOH . J 6 HOH A 41 641 4 HOH HOH . J 6 HOH A 42 642 42 HOH HOH . J 6 HOH A 43 643 60 HOH HOH . J 6 HOH A 44 644 12 HOH HOH . J 6 HOH A 45 645 67 HOH HOH . J 6 HOH A 46 646 36 HOH HOH . J 6 HOH A 47 647 15 HOH HOH . J 6 HOH A 48 648 54 HOH HOH . J 6 HOH A 49 649 31 HOH HOH . J 6 HOH A 50 650 13 HOH HOH . J 6 HOH A 51 651 62 HOH HOH . J 6 HOH A 52 652 41 HOH HOH . J 6 HOH A 53 653 16 HOH HOH . J 6 HOH A 54 654 57 HOH HOH . J 6 HOH A 55 655 49 HOH HOH . J 6 HOH A 56 656 39 HOH HOH . J 6 HOH A 57 657 43 HOH HOH . J 6 HOH A 58 658 21 HOH HOH . J 6 HOH A 59 659 6 HOH HOH . J 6 HOH A 60 660 74 HOH HOH . J 6 HOH A 61 661 68 HOH HOH . J 6 HOH A 62 662 24 HOH HOH . J 6 HOH A 63 663 5 HOH HOH . J 6 HOH A 64 664 3 HOH HOH . J 6 HOH A 65 665 55 HOH HOH . J 6 HOH A 66 666 35 HOH HOH . J 6 HOH A 67 667 40 HOH HOH . J 6 HOH A 68 668 61 HOH HOH . J 6 HOH A 69 669 1 HOH HOH . J 6 HOH A 70 670 58 HOH HOH . J 6 HOH A 71 671 50 HOH HOH . J 6 HOH A 72 672 47 HOH HOH . J 6 HOH A 73 673 65 HOH HOH . J 6 HOH A 74 674 48 HOH HOH . J 6 HOH A 75 675 59 HOH HOH . J 6 HOH A 76 676 45 HOH HOH . J 6 HOH A 77 677 76 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IPA . . . F 5 31.302 11.737 -0.593 1 74.95 ? C1 IPA 505 A 1 HETATM 2 C C2 IPA . . . F 5 32.697 12.324 -0.751 1 80.63 ? C2 IPA 505 A 1 HETATM 3 C C3 IPA . . . F 5 32.762 13.685 -0.069 1 83.53 ? C3 IPA 505 A 1 HETATM 4 O O2 IPA . . . F 5 33.643 11.457 -0.166 1 83.32 ? O2 IPA 505 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #