data_6PB1 # _model_server_result.job_id hdZnw53D6-27UHc6-7mD1w _model_server_result.datetime_utc '2024-11-26 03:49:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6pb1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":408}' # _entry.id 6PB1 # _exptl.entry_id 6PB1 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 256.424 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6PB1 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PB1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 K N N ? 8 L N N ? 8 M N N ? 8 N N N ? 8 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 183 P CYS 184 1_555 A SG CYS 253 P CYS 254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 F SG CYS 24 N CYS 22 1_555 F SG CYS 98 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 F SG CYS 101 N CYS 99 1_555 F SG CYS 109 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 335 n n C1 O2 PLM doub 336 n n C1 C2 PLM sing 337 n n O1 H PLM sing 338 n n C2 C3 PLM sing 339 n n C2 H21 PLM sing 340 n n C2 H22 PLM sing 341 n n C3 C4 PLM sing 342 n n C3 H31 PLM sing 343 n n C3 H32 PLM sing 344 n n C4 C5 PLM sing 345 n n C4 H41 PLM sing 346 n n C4 H42 PLM sing 347 n n C5 C6 PLM sing 348 n n C5 H51 PLM sing 349 n n C5 H52 PLM sing 350 n n C6 C7 PLM sing 351 n n C6 H61 PLM sing 352 n n C6 H62 PLM sing 353 n n C7 C8 PLM sing 354 n n C7 H71 PLM sing 355 n n C7 H72 PLM sing 356 n n C8 C9 PLM sing 357 n n C8 H81 PLM sing 358 n n C8 H82 PLM sing 359 n n C9 CA PLM sing 360 n n C9 H91 PLM sing 361 n n C9 H92 PLM sing 362 n n CA CB PLM sing 363 n n CA HA1 PLM sing 364 n n CA HA2 PLM sing 365 n n CB CC PLM sing 366 n n CB HB1 PLM sing 367 n n CB HB2 PLM sing 368 n n CC CD PLM sing 369 n n CC HC1 PLM sing 370 n n CC HC2 PLM sing 371 n n CD CE PLM sing 372 n n CD HD1 PLM sing 373 n n CD HD2 PLM sing 374 n n CE CF PLM sing 375 n n CE HE1 PLM sing 376 n n CE HE2 PLM sing 377 n n CF CG PLM sing 378 n n CF HF1 PLM sing 379 n n CF HF2 PLM sing 380 n n CG HG1 PLM sing 381 n n CG HG2 PLM sing 382 n n CG HG3 PLM sing 383 n n # _atom_sites.entry_id 6PB1 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 7 CLR P 1 401 610 CLR CLR . H 7 CLR P 1 402 611 CLR CLR . I 7 CLR P 1 403 612 CLR CLR . J 7 CLR P 1 404 614 CLR CLR . K 8 PLM P 1 405 615 PLM PLM . L 8 PLM P 1 406 616 PLM PLM . M 8 PLM P 1 407 617 PLM PLM . N 8 PLM P 1 408 618 PLM PLM . O 8 PLM P 1 409 619 PLM PLM . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . N 8 105.213 103.227 77.868 1 73.63 ? C1 PLM 408 P 1 HETATM 2 O O1 PLM . . . N 8 105.11 102.601 76.781 1 73.63 ? O1 PLM 408 P 1 HETATM 3 O O2 PLM . . . N 8 105.331 104.481 77.864 1 73.63 ? O2 PLM 408 P 1 HETATM 4 C C2 PLM . . . N 8 105.195 102.467 79.192 1 73.63 ? C2 PLM 408 P 1 HETATM 5 C C3 PLM . . . N 8 103.895 102.675 79.965 1 73.63 ? C3 PLM 408 P 1 HETATM 6 C C4 PLM . . . N 8 103.898 101.933 81.299 1 73.63 ? C4 PLM 408 P 1 HETATM 7 C C5 PLM . . . N 8 102.621 102.173 82.101 1 73.63 ? C5 PLM 408 P 1 HETATM 8 C C6 PLM . . . N 8 102.607 101.39 83.411 1 73.63 ? C6 PLM 408 P 1 HETATM 9 C C7 PLM . . . N 8 101.367 101.692 84.247 1 73.63 ? C7 PLM 408 P 1 HETATM 10 C C8 PLM . . . N 8 101.341 100.9 85.551 1 73.63 ? C8 PLM 408 P 1 HETATM 11 C C9 PLM . . . N 8 100.137 101.262 86.416 1 73.63 ? C9 PLM 408 P 1 HETATM 12 C CA PLM . . . N 8 100.066 100.433 87.696 1 73.63 ? CA PLM 408 P 1 HETATM 13 C CB PLM . . . N 8 99.104 101.014 88.731 1 73.63 ? CB PLM 408 P 1 HETATM 14 C CC PLM . . . N 8 97.772 101.46 88.13 1 73.63 ? CC PLM 408 P 1 HETATM 15 C CD PLM . . . N 8 96.629 101.371 89.137 1 73.63 ? CD PLM 408 P 1 HETATM 16 C CE PLM . . . N 8 96.418 102.683 89.888 1 73.63 ? CE PLM 408 P 1 HETATM 17 C CF PLM . . . N 8 95.198 102.62 90.803 1 73.63 ? CF PLM 408 P 1 HETATM 18 C CG PLM . . . N 8 95.557 102.878 92.263 1 73.63 ? CG PLM 408 P 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 18 #