data_6PBC # _model_server_result.job_id RgOv3w0p40DNU0cFOjtChw _model_server_result.datetime_utc '2024-11-05 05:02:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6pbc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1301}' # _entry.id 6PBC # _exptl.entry_id 6PBC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6PBC _cell.length_a 70.766 _cell.length_b 82.441 _cell.length_c 228.318 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PBC _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O TYR 76 A TYR 93 1_555 C NA NA . A NA 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? metalc ? metalc2 A O ASP 79 A ASP 96 1_555 C NA NA . A NA 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc3 A O PHE 82 A PHE 99 1_555 C NA NA . A NA 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.691 ? metalc ? metalc4 A OD1 ASN 319 A ASN 336 1_555 B CA CA . A CA 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? metalc ? metalc5 A OE2 GLU 348 A GLU 365 1_555 B CA CA . A CA 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc6 A OD1 ASP 350 A ASP 367 1_555 B CA CA . A CA 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.66 ? metalc ? metalc7 A OD2 ASP 350 A ASP 367 1_555 B CA CA . A CA 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.851 ? metalc ? metalc8 A OE2 GLU 397 A GLU 414 1_555 B CA CA . A CA 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.811 ? metalc ? metalc9 B CA CA . A CA 1301 1_555 D O HOH . A HOH 1553 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.731 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6PBC _atom_sites.fract_transf_matrix[1][1] 0.014131 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01213 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00438 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 1301 1301 CA CA . C 3 NA A 1 1302 1302 NA NA . D 4 HOH A 1 1401 1401 HOH HOH . D 4 HOH A 2 1402 1402 HOH HOH . D 4 HOH A 3 1403 1403 HOH HOH . D 4 HOH A 4 1404 1404 HOH HOH . D 4 HOH A 5 1405 1405 HOH HOH . D 4 HOH A 6 1406 1406 HOH HOH . D 4 HOH A 7 1407 1407 HOH HOH . D 4 HOH A 8 1408 1408 HOH HOH . D 4 HOH A 9 1409 1409 HOH HOH . D 4 HOH A 10 1410 1410 HOH HOH . D 4 HOH A 11 1411 1411 HOH HOH . D 4 HOH A 12 1412 1412 HOH HOH . D 4 HOH A 13 1413 1413 HOH HOH . D 4 HOH A 14 1414 1414 HOH HOH . D 4 HOH A 15 1415 1415 HOH HOH . D 4 HOH A 16 1416 1416 HOH HOH . D 4 HOH A 17 1417 1417 HOH HOH . D 4 HOH A 18 1418 1418 HOH HOH . D 4 HOH A 19 1419 1419 HOH HOH . D 4 HOH A 20 1420 1420 HOH HOH . D 4 HOH A 21 1421 1421 HOH HOH . D 4 HOH A 22 1422 1422 HOH HOH . D 4 HOH A 23 1423 1423 HOH HOH . D 4 HOH A 24 1424 1424 HOH HOH . D 4 HOH A 25 1425 1425 HOH HOH . D 4 HOH A 26 1426 1426 HOH HOH . D 4 HOH A 27 1427 1427 HOH HOH . D 4 HOH A 28 1428 1428 HOH HOH . D 4 HOH A 29 1429 1429 HOH HOH . D 4 HOH A 30 1430 1430 HOH HOH . D 4 HOH A 31 1431 1431 HOH HOH . D 4 HOH A 32 1432 1432 HOH HOH . D 4 HOH A 33 1433 1433 HOH HOH . D 4 HOH A 34 1434 1434 HOH HOH . D 4 HOH A 35 1435 1435 HOH HOH . D 4 HOH A 36 1436 1436 HOH HOH . D 4 HOH A 37 1437 1437 HOH HOH . D 4 HOH A 38 1438 1438 HOH HOH . D 4 HOH A 39 1439 1439 HOH HOH . D 4 HOH A 40 1440 1440 HOH HOH . D 4 HOH A 41 1441 1441 HOH HOH . D 4 HOH A 42 1442 1442 HOH HOH . D 4 HOH A 43 1443 1443 HOH HOH . D 4 HOH A 44 1444 1444 HOH HOH . D 4 HOH A 45 1445 1445 HOH HOH . D 4 HOH A 46 1446 1446 HOH HOH . D 4 HOH A 47 1447 1447 HOH HOH . D 4 HOH A 48 1448 1448 HOH HOH . D 4 HOH A 49 1449 1449 HOH HOH . D 4 HOH A 50 1450 1450 HOH HOH . D 4 HOH A 51 1451 1451 HOH HOH . D 4 HOH A 52 1452 1452 HOH HOH . D 4 HOH A 53 1453 1453 HOH HOH . D 4 HOH A 54 1454 1454 HOH HOH . D 4 HOH A 55 1455 1455 HOH HOH . D 4 HOH A 56 1456 1456 HOH HOH . D 4 HOH A 57 1457 1457 HOH HOH . D 4 HOH A 58 1458 1458 HOH HOH . D 4 HOH A 59 1459 1459 HOH HOH . D 4 HOH A 60 1460 1460 HOH HOH . D 4 HOH A 61 1461 1461 HOH HOH . D 4 HOH A 62 1462 1462 HOH HOH . D 4 HOH A 63 1463 1463 HOH HOH . D 4 HOH A 64 1464 1464 HOH HOH . D 4 HOH A 65 1465 1465 HOH HOH . D 4 HOH A 66 1466 1466 HOH HOH . D 4 HOH A 67 1467 1467 HOH HOH . D 4 HOH A 68 1468 1468 HOH HOH . D 4 HOH A 69 1469 1469 HOH HOH . D 4 HOH A 70 1470 1470 HOH HOH . D 4 HOH A 71 1471 1471 HOH HOH . D 4 HOH A 72 1472 1472 HOH HOH . D 4 HOH A 73 1473 1473 HOH HOH . D 4 HOH A 74 1474 1474 HOH HOH . D 4 HOH A 75 1475 1475 HOH HOH . D 4 HOH A 76 1476 1476 HOH HOH . D 4 HOH A 77 1477 1477 HOH HOH . D 4 HOH A 78 1478 1478 HOH HOH . D 4 HOH A 79 1479 1479 HOH HOH . D 4 HOH A 80 1480 1480 HOH HOH . D 4 HOH A 81 1481 1481 HOH HOH . D 4 HOH A 82 1482 1482 HOH HOH . D 4 HOH A 83 1483 1483 HOH HOH . D 4 HOH A 84 1484 1484 HOH HOH . D 4 HOH A 85 1485 1485 HOH HOH . D 4 HOH A 86 1486 1486 HOH HOH . D 4 HOH A 87 1487 1487 HOH HOH . D 4 HOH A 88 1488 1488 HOH HOH . D 4 HOH A 89 1489 1489 HOH HOH . D 4 HOH A 90 1490 1490 HOH HOH . D 4 HOH A 91 1491 1491 HOH HOH . D 4 HOH A 92 1492 1492 HOH HOH . D 4 HOH A 93 1493 1493 HOH HOH . D 4 HOH A 94 1494 1494 HOH HOH . D 4 HOH A 95 1495 1495 HOH HOH . D 4 HOH A 96 1496 1496 HOH HOH . D 4 HOH A 97 1497 1497 HOH HOH . D 4 HOH A 98 1498 1498 HOH HOH . D 4 HOH A 99 1499 1499 HOH HOH . D 4 HOH A 100 1500 1500 HOH HOH . D 4 HOH A 101 1501 1501 HOH HOH . D 4 HOH A 102 1502 1502 HOH HOH . D 4 HOH A 103 1503 1503 HOH HOH . D 4 HOH A 104 1504 1504 HOH HOH . D 4 HOH A 105 1505 1505 HOH HOH . D 4 HOH A 106 1506 1506 HOH HOH . D 4 HOH A 107 1507 1507 HOH HOH . D 4 HOH A 108 1508 1508 HOH HOH . D 4 HOH A 109 1509 1509 HOH HOH . D 4 HOH A 110 1510 1510 HOH HOH . D 4 HOH A 111 1511 1511 HOH HOH . D 4 HOH A 112 1512 1512 HOH HOH . D 4 HOH A 113 1513 1513 HOH HOH . D 4 HOH A 114 1514 1514 HOH HOH . D 4 HOH A 115 1515 1515 HOH HOH . D 4 HOH A 116 1516 1516 HOH HOH . D 4 HOH A 117 1517 1517 HOH HOH . D 4 HOH A 118 1518 1518 HOH HOH . D 4 HOH A 119 1519 1519 HOH HOH . D 4 HOH A 120 1520 1520 HOH HOH . D 4 HOH A 121 1521 1521 HOH HOH . D 4 HOH A 122 1522 1522 HOH HOH . D 4 HOH A 123 1523 1523 HOH HOH . D 4 HOH A 124 1524 1524 HOH HOH . D 4 HOH A 125 1525 1525 HOH HOH . D 4 HOH A 126 1526 1526 HOH HOH . D 4 HOH A 127 1527 1527 HOH HOH . D 4 HOH A 128 1528 1528 HOH HOH . D 4 HOH A 129 1529 1529 HOH HOH . D 4 HOH A 130 1530 1530 HOH HOH . D 4 HOH A 131 1531 1531 HOH HOH . D 4 HOH A 132 1532 1532 HOH HOH . D 4 HOH A 133 1533 1533 HOH HOH . D 4 HOH A 134 1534 1534 HOH HOH . D 4 HOH A 135 1535 1535 HOH HOH . D 4 HOH A 136 1536 1536 HOH HOH . D 4 HOH A 137 1537 1537 HOH HOH . D 4 HOH A 138 1538 1538 HOH HOH . D 4 HOH A 139 1539 1539 HOH HOH . D 4 HOH A 140 1540 1540 HOH HOH . D 4 HOH A 141 1541 1541 HOH HOH . D 4 HOH A 142 1542 1542 HOH HOH . D 4 HOH A 143 1543 1543 HOH HOH . D 4 HOH A 144 1544 1544 HOH HOH . D 4 HOH A 145 1545 1545 HOH HOH . D 4 HOH A 146 1546 1546 HOH HOH . D 4 HOH A 147 1547 1547 HOH HOH . D 4 HOH A 148 1548 1548 HOH HOH . D 4 HOH A 149 1549 1549 HOH HOH . D 4 HOH A 150 1550 1550 HOH HOH . D 4 HOH A 151 1551 1551 HOH HOH . D 4 HOH A 152 1552 1552 HOH HOH . D 4 HOH A 153 1553 1553 HOH HOH . D 4 HOH A 154 1554 1554 HOH HOH . D 4 HOH A 155 1555 1555 HOH HOH . D 4 HOH A 156 1556 1556 HOH HOH . D 4 HOH A 157 1557 1557 HOH HOH . D 4 HOH A 158 1558 1558 HOH HOH . D 4 HOH A 159 1559 1559 HOH HOH . D 4 HOH A 160 1560 1560 HOH HOH . D 4 HOH A 161 1561 1561 HOH HOH . D 4 HOH A 162 1562 1562 HOH HOH . D 4 HOH A 163 1563 1563 HOH HOH . D 4 HOH A 164 1564 1564 HOH HOH . D 4 HOH A 165 1565 1565 HOH HOH . D 4 HOH A 166 1566 1566 HOH HOH . D 4 HOH A 167 1567 1567 HOH HOH . D 4 HOH A 168 1568 1568 HOH HOH . D 4 HOH A 169 1569 1569 HOH HOH . D 4 HOH A 170 1570 1570 HOH HOH . D 4 HOH A 171 1571 1571 HOH HOH . D 4 HOH A 172 1572 1572 HOH HOH . D 4 HOH A 173 1573 1573 HOH HOH . D 4 HOH A 174 1574 1574 HOH HOH . D 4 HOH A 175 1575 1575 HOH HOH . D 4 HOH A 176 1576 1576 HOH HOH . D 4 HOH A 177 1577 1577 HOH HOH . D 4 HOH A 178 1578 1578 HOH HOH . D 4 HOH A 179 1579 1579 HOH HOH . D 4 HOH A 180 1580 1580 HOH HOH . D 4 HOH A 181 1581 1581 HOH HOH . D 4 HOH A 182 1582 1582 HOH HOH . D 4 HOH A 183 1583 1583 HOH HOH . D 4 HOH A 184 1584 1584 HOH HOH . D 4 HOH A 185 1585 1585 HOH HOH . D 4 HOH A 186 1586 1586 HOH HOH . D 4 HOH A 187 1587 1587 HOH HOH . D 4 HOH A 188 1588 1588 HOH HOH . D 4 HOH A 189 1589 1589 HOH HOH . D 4 HOH A 190 1590 1590 HOH HOH . D 4 HOH A 191 1591 1591 HOH HOH . D 4 HOH A 192 1592 1592 HOH HOH . D 4 HOH A 193 1593 1593 HOH HOH . D 4 HOH A 194 1594 1594 HOH HOH . D 4 HOH A 195 1595 1595 HOH HOH . D 4 HOH A 196 1596 1596 HOH HOH . D 4 HOH A 197 1597 1597 HOH HOH . D 4 HOH A 198 1598 1598 HOH HOH . D 4 HOH A 199 1599 1599 HOH HOH . D 4 HOH A 200 1600 1600 HOH HOH . D 4 HOH A 201 1601 1601 HOH HOH . D 4 HOH A 202 1602 1602 HOH HOH . D 4 HOH A 203 1603 1603 HOH HOH . D 4 HOH A 204 1604 1604 HOH HOH . D 4 HOH A 205 1605 1605 HOH HOH . D 4 HOH A 206 1606 1606 HOH HOH . D 4 HOH A 207 1607 1607 HOH HOH . D 4 HOH A 208 1608 1608 HOH HOH . D 4 HOH A 209 1609 1609 HOH HOH . D 4 HOH A 210 1610 1610 HOH HOH . D 4 HOH A 211 1611 1611 HOH HOH . D 4 HOH A 212 1612 1612 HOH HOH . D 4 HOH A 213 1613 1613 HOH HOH . D 4 HOH A 214 1614 1614 HOH HOH . D 4 HOH A 215 1615 1615 HOH HOH . D 4 HOH A 216 1616 1616 HOH HOH . D 4 HOH A 217 1617 1617 HOH HOH . D 4 HOH A 218 1618 1618 HOH HOH . D 4 HOH A 219 1619 1619 HOH HOH . D 4 HOH A 220 1620 1620 HOH HOH . D 4 HOH A 221 1621 1621 HOH HOH . D 4 HOH A 222 1622 1622 HOH HOH . D 4 HOH A 223 1623 1623 HOH HOH . D 4 HOH A 224 1624 1624 HOH HOH . D 4 HOH A 225 1625 1625 HOH HOH . D 4 HOH A 226 1626 1626 HOH HOH . D 4 HOH A 227 1627 1627 HOH HOH . D 4 HOH A 228 1628 1628 HOH HOH . D 4 HOH A 229 1629 1629 HOH HOH . D 4 HOH A 230 1630 1630 HOH HOH . D 4 HOH A 231 1631 1631 HOH HOH . D 4 HOH A 232 1632 1632 HOH HOH . D 4 HOH A 233 1633 1633 HOH HOH . D 4 HOH A 234 1634 1634 HOH HOH . D 4 HOH A 235 1635 1635 HOH HOH . D 4 HOH A 236 1636 1636 HOH HOH . D 4 HOH A 237 1637 1637 HOH HOH . D 4 HOH A 238 1638 1638 HOH HOH . D 4 HOH A 239 1639 1639 HOH HOH . D 4 HOH A 240 1640 1640 HOH HOH . D 4 HOH A 241 1641 1641 HOH HOH . D 4 HOH A 242 1642 1642 HOH HOH . D 4 HOH A 243 1643 1643 HOH HOH . D 4 HOH A 244 1644 1644 HOH HOH . D 4 HOH A 245 1645 1645 HOH HOH . D 4 HOH A 246 1646 1646 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -9.924 _atom_site.Cartn_y 10.549 _atom_site.Cartn_z -48.427 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 42.41 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 1301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #