data_6PBE
#
_model_server_result.job_id            s-LbpTV4EWjPp23zpn0AdQ 
_model_server_result.datetime_utc      '2025-02-05 15:45:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6pbe 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":1002}' 
#
_entry.id    6PBE 
#
_exptl.entry_id    6PBE 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              461.49 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(4-oxo-5-phenyl-3,4-dihydrothieno[2,3-d]pyrimidin-2-yl)methyl 3-(3-oxo-2,3-dihydro-4H-1,4-benzoxazin-4-yl)propanoate' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6PBE 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6PBE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
#
_chem_comp.formula           'C24 H19 N3 O5 S' 
_chem_comp.formula_weight    461.49 
_chem_comp.id                O6S 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(4-oxo-5-phenyl-3,4-dihydrothieno[2,3-d]pyrimidin-2-yl)methyl 3-(3-oxo-2,3-dihydro-4H-1,4-benzoxazin-4-yl)propanoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C27 C26 O6S doub 235 n y 
C27 C28 O6S sing 236 n y 
C26 C25 O6S sing 237 n y 
C28 C29 O6S doub 238 n y 
C25 C24 O6S doub 239 n y 
C29 C24 O6S sing 240 n y 
C24 C23 O6S sing 241 n n 
C23 C22 O6S doub 242 n y 
C23 C30 O6S sing 243 n y 
C22 S21 O6S sing 244 n y 
O32 C31 O6S doub 245 n n 
C30 C31 O6S sing 246 n n 
C30 C20 O6S doub 247 n y 
C31 N33 O6S sing 248 n n 
S21 C20 O6S sing 249 n y 
C20 N19 O6S sing 250 n n 
N33 C18 O6S sing 251 n n 
N19 C18 O6S doub 252 n n 
C18 C17 O6S sing 253 n n 
C17 O16 O6S sing 254 n n 
O16 C02 O6S sing 255 n n 
O01 C02 O6S doub 256 n n 
C02 C03 O6S sing 257 n n 
C03 C04 O6S sing 258 n n 
C04 N05 O6S sing 259 n n 
C14 C13 O6S doub 260 n y 
C14 C15 O6S sing 261 n y 
N05 C15 O6S sing 262 n n 
N05 C06 O6S sing 263 n n 
C13 C12 O6S sing 264 n y 
C15 C10 O6S doub 265 n y 
O07 C06 O6S doub 266 n n 
C06 C08 O6S sing 267 n n 
C10 C11 O6S sing 268 n y 
C10 O09 O6S sing 269 n n 
C12 C11 O6S doub 270 n y 
O09 C08 O6S sing 271 n n 
C03 H1 O6S sing 272 n n 
C03 H2 O6S sing 273 n n 
C04 H3 O6S sing 274 n n 
C04 H4 O6S sing 275 n n 
C08 H5 O6S sing 276 n n 
C08 H6 O6S sing 277 n n 
C11 H7 O6S sing 278 n n 
C12 H8 O6S sing 279 n n 
C13 H9 O6S sing 280 n n 
C14 H10 O6S sing 281 n n 
C17 H11 O6S sing 282 n n 
C17 H12 O6S sing 283 n n 
C22 H13 O6S sing 284 n n 
C25 H14 O6S sing 285 n n 
C26 H15 O6S sing 286 n n 
C27 H16 O6S sing 287 n n 
C28 H17 O6S sing 288 n n 
C29 H18 O6S sing 289 n n 
N33 H19 O6S sing 290 n n 
#
_atom_sites.entry_id                     6PBE 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 O6S A 1 1001 1001 O6S ZN2 . 
F 2 O6S A 1 1002 1002 O6S ZN2 . 
G 2 O6S B 1 1001 1001 O6S ZN2 . 
H 2 O6S B 1 1002 1002 O6S ZN2 . 
I 2 O6S C 1 1001 1001 O6S ZN2 . 
J 2 O6S C 1 1002 1002 O6S ZN2 . 
K 2 O6S D 1 1001 1001 O6S ZN2 . 
L 2 O6S D 1 1002 1002 O6S ZN2 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C02 O6S . . . H 2 84.763 116.495 114.117 1 29.85 ? C02 O6S 1002 B 1 
HETATM 2 C C03 O6S . . . H 2 83.32 116.434 113.704 1 29.85 ? C03 O6S 1002 B 1 
HETATM 3 C C04 O6S . . . H 2 82.418 117.625 114.22 1 29.85 ? C04 O6S 1002 B 1 
HETATM 4 C C06 O6S . . . H 2 83.376 119.972 114.336 1 29.85 ? C06 O6S 1002 B 1 
HETATM 5 C C08 O6S . . . H 2 83.595 121.333 113.69 1 29.85 ? C08 O6S 1002 B 1 
HETATM 6 C C10 O6S . . . H 2 82.104 120.75 112.033 1 29.85 ? C10 O6S 1002 B 1 
HETATM 7 C C11 O6S . . . H 2 81.624 121.226 110.824 1 29.85 ? C11 O6S 1002 B 1 
HETATM 8 C C12 O6S . . . H 2 81.172 120.307 109.89 1 29.85 ? C12 O6S 1002 B 1 
HETATM 9 C C13 O6S . . . H 2 81.207 118.962 110.178 1 29.85 ? C13 O6S 1002 B 1 
HETATM 10 C C14 O6S . . . H 2 81.682 118.492 111.391 1 29.85 ? C14 O6S 1002 B 1 
HETATM 11 C C15 O6S . . . H 2 82.157 119.396 112.35 1 29.85 ? C15 O6S 1002 B 1 
HETATM 12 C C17 O6S . . . H 2 86.558 116.112 112.42 1 29.85 ? C17 O6S 1002 B 1 
HETATM 13 C C18 O6S . . . H 2 87.24 117.445 112.71 1 29.85 ? C18 O6S 1002 B 1 
HETATM 14 C C20 O6S . . . H 2 88.017 119.569 112.326 1 29.85 ? C20 O6S 1002 B 1 
HETATM 15 C C22 O6S . . . H 2 89.098 121.757 112.791 1 29.85 ? C22 O6S 1002 B 1 
HETATM 16 C C23 O6S . . . H 2 89.133 120.971 113.904 1 29.85 ? C23 O6S 1002 B 1 
HETATM 17 C C24 O6S . . . H 2 89.668 121.293 115.206 1 29.85 ? C24 O6S 1002 B 1 
HETATM 18 C C25 O6S . . . H 2 90.906 120.823 115.64 1 29.85 ? C25 O6S 1002 B 1 
HETATM 19 C C26 O6S . . . H 2 91.361 121.134 116.911 1 29.85 ? C26 O6S 1002 B 1 
HETATM 20 C C27 O6S . . . H 2 90.581 121.9 117.77 1 29.85 ? C27 O6S 1002 B 1 
HETATM 21 C C28 O6S . . . H 2 89.343 122.354 117.349 1 29.85 ? C28 O6S 1002 B 1 
HETATM 22 C C29 O6S . . . H 2 88.887 122.046 116.083 1 29.85 ? C29 O6S 1002 B 1 
HETATM 23 C C30 O6S . . . H 2 88.493 119.702 113.615 1 29.85 ? C30 O6S 1002 B 1 
HETATM 24 C C31 O6S . . . H 2 88.326 118.607 114.541 1 29.85 ? C31 O6S 1002 B 1 
HETATM 25 N N05 O6S . . . H 2 82.66 118.973 113.64 1 29.85 ? N05 O6S 1002 B 1 
HETATM 26 N N19 O6S . . . H 2 87.374 118.434 111.83 1 29.85 ? N19 O6S 1002 B 1 
HETATM 27 N N33 O6S . . . H 2 87.69 117.507 113.998 1 29.85 ? N33 O6S 1002 B 1 
HETATM 28 O O01 O6S . . . H 2 85.176 117.238 115.017 1 29.85 ? O01 O6S 1002 B 1 
HETATM 29 O O07 O6S . . . H 2 83.835 119.705 115.461 1 29.85 ? O07 O6S 1002 B 1 
HETATM 30 O O09 O6S . . . H 2 82.525 121.723 112.898 1 29.85 ? O09 O6S 1002 B 1 
HETATM 31 O O16 O6S . . . H 2 85.686 115.687 113.5 1 29.85 ? O16 O6S 1002 B 1 
HETATM 32 O O32 O6S . . . H 2 88.67 118.525 115.715 1 29.85 ? O32 O6S 1002 B 1 
HETATM 33 S S21 O6S . . . H 2 88.339 121.005 111.442 1 29.85 ? S21 O6S 1002 B 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           33 
#