data_6PBO
#
_model_server_result.job_id            s19wJcaIl2wMTFM_i0dH1Q 
_model_server_result.datetime_utc      '2024-11-15 22:42:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6pbo 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":202}' 
#
_entry.id    6PBO 
#
_exptl.entry_id    6PBO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              745.421 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'Tricyclic NADPH' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6PBO 
_cell.length_a            78.94 
_cell.length_b            78.94 
_cell.length_c            108.27 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6PBO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C21 H30 N7 O17 P3' 
_chem_comp.formula_weight    745.421 
_chem_comp.id                XNP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'Tricyclic NADPH' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O3' C3' XNP sing 503 n n 
C3' C2' XNP sing 504 n n 
C3' C4' XNP sing 505 n n 
C2' O2' XNP sing 506 n n 
C2' C1' XNP sing 507 n n 
O2' CAA XNP sing 508 n n 
CAA CAB XNP sing 509 n n 
CAA NAF XNP sing 510 n n 
CAB CAC XNP sing 511 n n 
CAC CAD XNP sing 512 n n 
CAD CBT XNP sing 513 n n 
CAD CAE XNP doub 514 n n 
CBT OBV XNP doub 515 n n 
CBT NBU XNP sing 516 n n 
CAE NAF XNP sing 517 n n 
NAF C1' XNP sing 518 n n 
C1' O4' XNP sing 519 n n 
O4' C4' XNP sing 520 n n 
C4' C5' XNP sing 521 n n 
C5' O5' XNP sing 522 n n 
O5' PAN XNP sing 523 n n 
PAN OBP XNP doub 524 n n 
PAN OBO XNP sing 525 n n 
PAN OAO XNP sing 526 n n 
OAO PAP XNP sing 527 n n 
PAP OBQ XNP doub 528 n n 
PAP OBR XNP sing 529 n n 
PAP OAQ XNP sing 530 n n 
OAQ CAR XNP sing 531 n n 
CAR CAS XNP sing 532 n n 
CAS OAW XNP sing 533 n n 
CAS CAT XNP sing 534 n n 
OAW CAV XNP sing 535 n n 
CAT OAZ XNP sing 536 n n 
CAT CAU XNP sing 537 n n 
CAU OAY XNP sing 538 n n 
CAU CAV XNP sing 539 n n 
OAY PBA XNP sing 540 n n 
PBA OBB XNP doub 541 n n 
PBA OBC XNP sing 542 n n 
PBA OBD XNP sing 543 n n 
CAV NAX XNP sing 544 n n 
NAX CBE XNP sing 545 n y 
NAX CBH XNP sing 546 n y 
CBE NBF XNP doub 547 n y 
NBF CBG XNP sing 548 n y 
CBG CBH XNP doub 549 n y 
CBG CBI XNP sing 550 n y 
CBH NBL XNP sing 551 n y 
NBL CBK XNP doub 552 n y 
CBK NBJ XNP sing 553 n y 
NBJ CBI XNP doub 554 n y 
CBI NBM XNP sing 555 n n 
O3' H1 XNP sing 556 n n 
C3' H2 XNP sing 557 n n 
C2' H3 XNP sing 558 n n 
CAA H4 XNP sing 559 n n 
CAB H5 XNP sing 560 n n 
CAB H6 XNP sing 561 n n 
CAC H7 XNP sing 562 n n 
CAC H8 XNP sing 563 n n 
NBU H9 XNP sing 564 n n 
NBU H10 XNP sing 565 n n 
CAE H11 XNP sing 566 n n 
C1' H12 XNP sing 567 n n 
C4' H13 XNP sing 568 n n 
C5' H14 XNP sing 569 n n 
C5' H15 XNP sing 570 n n 
OBO H16 XNP sing 571 n n 
OBR H17 XNP sing 572 n n 
CAR H18 XNP sing 573 n n 
CAR H19 XNP sing 574 n n 
CAS H20 XNP sing 575 n n 
CAT H21 XNP sing 576 n n 
OAZ H22 XNP sing 577 n n 
CAU H23 XNP sing 578 n n 
OBC H24 XNP sing 579 n n 
OBD H25 XNP sing 580 n n 
CAV H26 XNP sing 581 n n 
CBE H27 XNP sing 582 n n 
CBK H30 XNP sing 583 n n 
NBM H31 XNP sing 584 n n 
NBM H32 XNP sing 585 n n 
#
_atom_sites.entry_id                     6PBO 
_atom_sites.fract_transf_matrix[1][1]    0.012668 
_atom_sites.fract_transf_matrix[1][2]    0.007314 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014628 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009236 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 O71 X 1 201 1 O71 DRG . 
C 3 XNP X 1 202 1 XNP ANH . 
D 4 NAP X 1 203 208 NAP NAP . 
E 5 HOH X 1 301 5 HOH HOH . 
E 5 HOH X 2 302 40 HOH HOH . 
E 5 HOH X 3 303 26 HOH HOH . 
E 5 HOH X 4 304 27 HOH HOH . 
E 5 HOH X 5 305 32 HOH HOH . 
E 5 HOH X 6 306 6 HOH HOH . 
E 5 HOH X 7 307 18 HOH HOH . 
E 5 HOH X 8 308 13 HOH HOH . 
E 5 HOH X 9 309 2 HOH HOH . 
E 5 HOH X 10 310 38 HOH HOH . 
E 5 HOH X 11 311 9 HOH HOH . 
E 5 HOH X 12 312 37 HOH HOH . 
E 5 HOH X 13 313 25 HOH HOH . 
E 5 HOH X 14 314 29 HOH HOH . 
E 5 HOH X 15 315 8 HOH HOH . 
E 5 HOH X 16 316 20 HOH HOH . 
E 5 HOH X 17 317 33 HOH HOH . 
E 5 HOH X 18 318 31 HOH HOH . 
E 5 HOH X 19 319 34 HOH HOH . 
E 5 HOH X 20 320 21 HOH HOH . 
E 5 HOH X 21 321 14 HOH HOH . 
E 5 HOH X 22 322 3 HOH HOH . 
E 5 HOH X 23 323 5 HOH HOH . 
E 5 HOH X 24 324 42 HOH HOH . 
E 5 HOH X 25 325 23 HOH HOH . 
E 5 HOH X 26 326 2 HOH HOH . 
E 5 HOH X 27 327 35 HOH HOH . 
E 5 HOH X 28 328 16 HOH HOH . 
E 5 HOH X 29 329 19 HOH HOH . 
E 5 HOH X 30 330 30 HOH HOH . 
E 5 HOH X 31 331 28 HOH HOH . 
E 5 HOH X 32 332 7 HOH HOH . 
E 5 HOH X 33 333 24 HOH HOH . 
E 5 HOH X 34 334 15 HOH HOH . 
E 5 HOH X 35 335 22 HOH HOH . 
E 5 HOH X 36 336 17 HOH HOH . 
E 5 HOH X 37 337 10 HOH HOH . 
E 5 HOH X 38 338 1 HOH HOH . 
E 5 HOH X 39 339 4 HOH HOH . 
E 5 HOH X 40 340 4 HOH HOH . 
E 5 HOH X 41 341 12 HOH HOH . 
E 5 HOH X 42 342 36 HOH HOH . 
E 5 HOH X 43 343 11 HOH HOH . 
E 5 HOH X 44 344 41 HOH HOH . 
E 5 HOH X 45 345 39 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O3' XNP . B . C 3 -25.203 -20.472 49.085 0.39 21.48 ? O3' XNP 202 X 1 
HETATM 2 C C3' XNP . B . C 3 -25.359 -20.623 47.667 0.39 20.36 ? C3' XNP 202 X 1 
HETATM 3 C C2' XNP . B . C 3 -26.247 -19.572 47.051 0.39 21.51 ? C2' XNP 202 X 1 
HETATM 4 O O2' XNP . B . C 3 -26.733 -18.534 47.922 0.39 21.12 ? O2' XNP 202 X 1 
HETATM 5 C CAA XNP . B . C 3 -26.418 -17.336 47.156 0.39 20.05 ? CAA XNP 202 X 1 
HETATM 6 C CAB XNP . B . C 3 -27.475 -16.281 47.178 0.39 20.53 ? CAB XNP 202 X 1 
HETATM 7 C CAC XNP . B . C 3 -26.881 -15.119 46.394 0.39 18.94 ? CAC XNP 202 X 1 
HETATM 8 C CAD XNP . B . C 3 -26.26 -15.552 45.209 0.39 18.99 ? CAD XNP 202 X 1 
HETATM 9 C CBT XNP . B . C 3 -25.895 -14.616 44.256 0.39 18.33 ? CBT XNP 202 X 1 
HETATM 10 O OBV XNP . B . C 3 -25.332 -14.975 43.223 0.39 18.73 ? OBV XNP 202 X 1 
HETATM 11 N NBU XNP . B . C 3 -26.19 -13.353 44.552 0.39 18.54 ? NBU XNP 202 X 1 
HETATM 12 C CAE XNP . B . C 3 -25.896 -16.88 44.971 0.39 18.54 ? CAE XNP 202 X 1 
HETATM 13 N NAF XNP . B . C 3 -26.254 -17.85 45.796 0.39 19.53 ? NAF XNP 202 X 1 
HETATM 14 C C1' XNP . B . C 3 -25.229 -18.765 46.288 0.39 19.87 ? C1' XNP 202 X 1 
HETATM 15 O O4' XNP . B . C 3 -24.504 -19.81 45.647 0.39 19.31 ? O4' XNP 202 X 1 
HETATM 16 C C4' XNP . B . C 3 -24.043 -20.323 46.939 0.39 18.81 ? C4' XNP 202 X 1 
HETATM 17 C C5' XNP . B . C 3 -23.184 -21.585 46.955 0.39 19.28 ? C5' XNP 202 X 1 
HETATM 18 O O5' XNP . B . C 3 -22 -21.348 46.227 0.39 19.7 ? O5' XNP 202 X 1 
HETATM 19 P PAN XNP . B . C 3 -21.941 -21.616 44.652 0.39 17.81 ? PAN XNP 202 X 1 
HETATM 20 O OBP XNP . B . C 3 -21.28 -20.482 43.964 0.39 18.71 ? OBP XNP 202 X 1 
HETATM 21 O OBO XNP . B . C 3 -21.13 -22.991 44.507 0.39 18.01 ? OBO XNP 202 X 1 
HETATM 22 O OAO XNP . B . C 3 -23.403 -21.91 44.059 0.39 19.33 ? OAO XNP 202 X 1 
HETATM 23 P PAP XNP . B . C 3 -23.729 -21.413 42.523 0.39 19.08 ? PAP XNP 202 X 1 
HETATM 24 O OBQ XNP . B . C 3 -25.344 -21.298 42.228 0.39 16.85 ? OBQ XNP 202 X 1 
HETATM 25 O OBR XNP . B . C 3 -22.771 -21.709 41.409 0.39 18.44 ? OBR XNP 202 X 1 
HETATM 26 O OAQ XNP . B . C 3 -24.162 -22.989 42.321 0.39 17.64 ? OAQ XNP 202 X 1 
HETATM 27 C CAR XNP . B . C 3 -23.271 -24.106 42.53 0.39 18.73 ? CAR XNP 202 X 1 
HETATM 28 C CAS XNP . B . C 3 -23.69 -25.317 41.672 0.39 19.71 ? CAS XNP 202 X 1 
HETATM 29 O OAW XNP . B . C 3 -23.645 -25.044 40.243 0.39 20.4 ? OAW XNP 202 X 1 
HETATM 30 C CAT XNP . B . C 3 -22.714 -26.466 41.795 0.39 20.06 ? CAT XNP 202 X 1 
HETATM 31 O OAZ XNP . B . C 3 -22.831 -27.113 43.066 0.39 18.85 ? OAZ XNP 202 X 1 
HETATM 32 C CAU XNP . B . C 3 -23.297 -27.314 40.703 0.39 19.84 ? CAU XNP 202 X 1 
HETATM 33 O OAY XNP . B . C 3 -24.667 -27.624 41.001 0.39 19.23 ? OAY XNP 202 X 1 
HETATM 34 P PBA XNP . B . C 3 -25.007 -29.164 41.4 0.39 18 ? PBA XNP 202 X 1 
HETATM 35 O OBB XNP . B . C 3 -26.607 -29.228 41.541 0.39 21.32 ? OBB XNP 202 X 1 
HETATM 36 O OBC XNP . B . C 3 -24.422 -29.358 42.89 0.39 17.28 ? OBC XNP 202 X 1 
HETATM 37 O OBD XNP . B . C 3 -24.438 -30.102 40.404 0.39 19.36 ? OBD XNP 202 X 1 
HETATM 38 C CAV XNP . B . C 3 -23.203 -26.277 39.6 0.39 19.77 ? CAV XNP 202 X 1 
HETATM 39 N NAX XNP . B . C 3 -21.8 -26.189 39.174 0.39 19.2 ? NAX XNP 202 X 1 
HETATM 40 C CBE XNP . B . C 3 -21.359 -24.842 38.778 0.39 20.19 ? CBE XNP 202 X 1 
HETATM 41 N NBF XNP . B . C 3 -20.127 -25.226 38.011 0.39 21 ? NBF XNP 202 X 1 
HETATM 42 C CBG XNP . B . C 3 -20.347 -26.447 37.502 0.39 21.21 ? CBG XNP 202 X 1 
HETATM 43 C CBH XNP . B . C 3 -21.674 -26.726 37.82 0.39 21.72 ? CBH XNP 202 X 1 
HETATM 44 N NBL XNP . B . C 3 -22.133 -28.101 37.51 0.39 21.43 ? NBL XNP 202 X 1 
HETATM 45 C CBK XNP . B . C 3 -21.341 -28.903 36.687 0.39 22.25 ? CBK XNP 202 X 1 
HETATM 46 N NBJ XNP . B . C 3 -20.062 -28.46 36.337 0.39 22.33 ? NBJ XNP 202 X 1 
HETATM 47 C CBI XNP . B . C 3 -19.615 -27.269 36.754 0.39 21.46 ? CBI XNP 202 X 1 
HETATM 48 N NBM XNP . B . C 3 -18.398 -26.845 36.428 0.39 21.61 ? NBM XNP 202 X 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           282 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           48 
#