data_6PC9 # _model_server_result.job_id CyFgnPM5W8NPUDe_e6E92w _model_server_result.datetime_utc '2025-01-10 18:32:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6pc9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 6PC9 # _exptl.entry_id 6PC9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6PC9 _cell.length_a 60.534 _cell.length_b 76.711 _cell.length_c 86.205 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PC9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 30 A CYS 30 1_555 A SG CYS 33 A CYS 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? disulf ? disulf2 B SG CYS 30 B CYS 30 1_555 B SG CYS 33 B CYS 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 287 n n C1 C2 PGE sing 288 n n C1 H1 PGE sing 289 n n C1 H12 PGE sing 290 n n O1 HO1 PGE sing 291 n n C2 O2 PGE sing 292 n n C2 H2 PGE sing 293 n n C2 H22 PGE sing 294 n n O2 C3 PGE sing 295 n n C3 C4 PGE sing 296 n n C3 H3 PGE sing 297 n n C3 H32 PGE sing 298 n n C4 O3 PGE sing 299 n n C4 H4 PGE sing 300 n n C4 H42 PGE sing 301 n n O4 C6 PGE sing 302 n n O4 HO4 PGE sing 303 n n C6 C5 PGE sing 304 n n C6 H6 PGE sing 305 n n C6 H62 PGE sing 306 n n C5 O3 PGE sing 307 n n C5 H5 PGE sing 308 n n C5 H52 PGE sing 309 n n # _atom_sites.entry_id 6PC9 _atom_sites.fract_transf_matrix[1][1] 0.01652 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013036 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0116 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 O7P A 1 201 201 O7P 689 . D 3 PGE B 1 201 201 PGE PGE . E 4 HOH A 1 301 81 HOH HOH . E 4 HOH A 2 302 50 HOH HOH . E 4 HOH A 3 303 13 HOH HOH . E 4 HOH A 4 304 86 HOH HOH . E 4 HOH A 5 305 69 HOH HOH . E 4 HOH A 6 306 73 HOH HOH . E 4 HOH A 7 307 18 HOH HOH . E 4 HOH A 8 308 62 HOH HOH . E 4 HOH A 9 309 1 HOH HOH . E 4 HOH A 10 310 3 HOH HOH . E 4 HOH A 11 311 53 HOH HOH . E 4 HOH A 12 312 17 HOH HOH . E 4 HOH A 13 313 29 HOH HOH . E 4 HOH A 14 314 7 HOH HOH . E 4 HOH A 15 315 2 HOH HOH . E 4 HOH A 16 316 12 HOH HOH . E 4 HOH A 17 317 49 HOH HOH . E 4 HOH A 18 318 40 HOH HOH . E 4 HOH A 19 319 4 HOH HOH . E 4 HOH A 20 320 67 HOH HOH . E 4 HOH A 21 321 15 HOH HOH . E 4 HOH A 22 322 42 HOH HOH . E 4 HOH A 23 323 63 HOH HOH . E 4 HOH A 24 324 82 HOH HOH . E 4 HOH A 25 325 43 HOH HOH . E 4 HOH A 26 326 57 HOH HOH . E 4 HOH A 27 327 16 HOH HOH . E 4 HOH A 28 328 89 HOH HOH . E 4 HOH A 29 329 11 HOH HOH . E 4 HOH A 30 330 19 HOH HOH . E 4 HOH A 31 331 80 HOH HOH . E 4 HOH A 32 332 37 HOH HOH . E 4 HOH A 33 333 60 HOH HOH . E 4 HOH A 34 334 21 HOH HOH . E 4 HOH A 35 335 68 HOH HOH . E 4 HOH A 36 336 44 HOH HOH . E 4 HOH A 37 337 48 HOH HOH . E 4 HOH A 38 338 55 HOH HOH . E 4 HOH A 39 339 39 HOH HOH . E 4 HOH A 40 340 27 HOH HOH . E 4 HOH A 41 341 5 HOH HOH . E 4 HOH A 42 342 9 HOH HOH . E 4 HOH A 43 343 22 HOH HOH . E 4 HOH A 44 344 58 HOH HOH . E 4 HOH A 45 345 59 HOH HOH . E 4 HOH A 46 346 23 HOH HOH . E 4 HOH A 47 347 88 HOH HOH . E 4 HOH A 48 348 87 HOH HOH . E 4 HOH A 49 349 33 HOH HOH . E 4 HOH A 50 350 56 HOH HOH . E 4 HOH A 51 351 46 HOH HOH . F 4 HOH B 1 301 10 HOH HOH . F 4 HOH B 2 302 85 HOH HOH . F 4 HOH B 3 303 24 HOH HOH . F 4 HOH B 4 304 14 HOH HOH . F 4 HOH B 5 305 77 HOH HOH . F 4 HOH B 6 306 8 HOH HOH . F 4 HOH B 7 307 76 HOH HOH . F 4 HOH B 8 308 20 HOH HOH . F 4 HOH B 9 309 25 HOH HOH . F 4 HOH B 10 310 78 HOH HOH . F 4 HOH B 11 311 31 HOH HOH . F 4 HOH B 12 312 26 HOH HOH . F 4 HOH B 13 313 45 HOH HOH . F 4 HOH B 14 314 61 HOH HOH . F 4 HOH B 15 315 52 HOH HOH . F 4 HOH B 16 316 34 HOH HOH . F 4 HOH B 17 317 47 HOH HOH . F 4 HOH B 18 318 51 HOH HOH . F 4 HOH B 19 319 35 HOH HOH . F 4 HOH B 20 320 83 HOH HOH . F 4 HOH B 21 321 6 HOH HOH . F 4 HOH B 22 322 30 HOH HOH . F 4 HOH B 23 323 38 HOH HOH . F 4 HOH B 24 324 32 HOH HOH . F 4 HOH B 25 325 41 HOH HOH . F 4 HOH B 26 326 36 HOH HOH . F 4 HOH B 27 327 64 HOH HOH . F 4 HOH B 28 328 70 HOH HOH . F 4 HOH B 29 329 74 HOH HOH . F 4 HOH B 30 330 28 HOH HOH . F 4 HOH B 31 331 71 HOH HOH . F 4 HOH B 32 332 66 HOH HOH . F 4 HOH B 33 333 65 HOH HOH . F 4 HOH B 34 334 75 HOH HOH . F 4 HOH B 35 335 79 HOH HOH . F 4 HOH B 36 336 54 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . D 3 13.378 -20.84 21.036 1 72.48 ? C1 PGE 201 B 1 HETATM 2 O O1 PGE . . . D 3 12.42 -21.89 20.996 1 79.14 ? O1 PGE 201 B 1 HETATM 3 C C2 PGE . . . D 3 13.221 -20.092 22.348 1 77.88 ? C2 PGE 201 B 1 HETATM 4 O O2 PGE . . . D 3 13.506 -18.708 22.211 1 76.67 ? O2 PGE 201 B 1 HETATM 5 C C3 PGE . . . D 3 13.226 -18.159 20.935 1 74.8 ? C3 PGE 201 B 1 HETATM 6 C C4 PGE . . . D 3 11.923 -17.379 20.968 1 78.09 ? C4 PGE 201 B 1 HETATM 7 O O4 PGE . . . D 3 8.691 -16.817 21.047 1 80.64 ? O4 PGE 201 B 1 HETATM 8 C C6 PGE . . . D 3 8.99 -16.782 22.438 1 74.94 ? C6 PGE 201 B 1 HETATM 9 C C5 PGE . . . D 3 10.471 -16.505 22.616 1 71.16 ? C5 PGE 201 B 1 HETATM 10 O O3 PGE . . . D 3 11.218 -17.624 22.172 1 79.04 ? O3 PGE 201 B 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 238 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 10 #