data_6PDA
#
_model_server_result.job_id            LTCkuPw4Y52YSIuY-xdnSQ 
_model_server_result.datetime_utc      '2024-11-20 11:36:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6pda 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":806}' 
#
_entry.id    6PDA 
#
_exptl.entry_id    6PDA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              385.412 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "2-fluoro-3-methyl-N'-(phenylsulfonyl)-5-(pyridin-2-yl)benzohydrazide" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6PDA 
_cell.length_a            45.925 
_cell.length_b            56.214 
_cell.length_c            122.279 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6PDA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C HIS 97 A HIS 603 1_555 A N ALY 98 A ALY 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale2 A C ALY 98 A ALY 604 1_555 A N THR 99 A THR 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
metalc ? metalc1 A SG CYS 34 A CYS 540 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? 
metalc ? metalc2 A SG CYS 37 A CYS 543 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? 
metalc ? metalc3 A NE2 HIS 50 A HIS 556 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? 
metalc ? metalc4 A SG CYS 54 A CYS 560 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? 
metalc ? metalc5 C NA NA . A NA 802 1_555 H O HOH . A HOH 913 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.956 ? 
metalc ? metalc6 C NA NA . A NA 802 1_555 H O HOH . A HOH 932 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.807 ? 
#
_chem_comp.formula           'C19 H16 F N3 O3 S' 
_chem_comp.formula_weight    385.412 
_chem_comp.id                O9J 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "2-fluoro-3-methyl-N'-(phenylsulfonyl)-5-(pyridin-2-yl)benzohydrazide" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C25 C24 O9J doub 278 n y 
C25 C26 O9J sing 279 n y 
C24 C23 O9J sing 280 n y 
C26 C27 O9J doub 281 n y 
C23 C22 O9J doub 282 n y 
C01 C02 O9J sing 283 n n 
C27 C22 O9J sing 284 n y 
C22 S19 O9J sing 285 n n 
F04 C03 O9J sing 286 n n 
C02 C03 O9J doub 287 n y 
C02 C08 O9J sing 288 n y 
O21 S19 O9J doub 289 n n 
C03 C05 O9J sing 290 n y 
S19 O20 O9J doub 291 n n 
S19 N18 O9J sing 292 n n 
C08 C07 O9J doub 293 n y 
N17 N18 O9J sing 294 n n 
N17 C15 O9J sing 295 n n 
C05 C15 O9J sing 296 n n 
C05 C06 O9J doub 297 n y 
C15 O16 O9J doub 298 n n 
C07 C06 O9J sing 299 n y 
C07 C09 O9J sing 300 n n 
C14 C09 O9J doub 301 n y 
C14 C13 O9J sing 302 n y 
C09 N10 O9J sing 303 n y 
C13 C12 O9J doub 304 n y 
N10 C11 O9J doub 305 n y 
C11 C12 O9J sing 306 n y 
C13 H1 O9J sing 307 n n 
C24 H2 O9J sing 308 n n 
C26 H3 O9J sing 309 n n 
C01 H4 O9J sing 310 n n 
C01 H5 O9J sing 311 n n 
C01 H6 O9J sing 312 n n 
C06 H7 O9J sing 313 n n 
C08 H8 O9J sing 314 n n 
C11 H9 O9J sing 315 n n 
C12 H10 O9J sing 316 n n 
C14 H11 O9J sing 317 n n 
C23 H12 O9J sing 318 n n 
C25 H13 O9J sing 319 n n 
C27 H14 O9J sing 320 n n 
N17 H15 O9J sing 321 n n 
N18 H16 O9J sing 322 n n 
#
_atom_sites.entry_id                     6PDA 
_atom_sites.fract_transf_matrix[1][1]    0.021775 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017789 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008178 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 801 506 ZN ZN . 
C 3 NA A 1 802 507 NA NA . 
D 4 GOL A 1 803 510 GOL GOL . 
E 4 GOL A 1 804 511 GOL GOL . 
F 5 SO4 A 1 805 512 SO4 SO4 . 
G 6 O9J A 1 806 506 O9J LIG . 
H 7 HOH A 1 901 22 HOH HOH . 
H 7 HOH A 2 902 86 HOH HOH . 
H 7 HOH A 3 903 26 HOH HOH . 
H 7 HOH A 4 904 60 HOH HOH . 
H 7 HOH A 5 905 36 HOH HOH . 
H 7 HOH A 6 906 7 HOH HOH . 
H 7 HOH A 7 907 11 HOH HOH . 
H 7 HOH A 8 908 1 HOH HOH . 
H 7 HOH A 9 909 3 HOH HOH . 
H 7 HOH A 10 910 79 HOH HOH . 
H 7 HOH A 11 911 25 HOH HOH . 
H 7 HOH A 12 912 24 HOH HOH . 
H 7 HOH A 13 913 69 HOH HOH . 
H 7 HOH A 14 914 78 HOH HOH . 
H 7 HOH A 15 915 6 HOH HOH . 
H 7 HOH A 16 916 4 HOH HOH . 
H 7 HOH A 17 917 23 HOH HOH . 
H 7 HOH A 18 918 17 HOH HOH . 
H 7 HOH A 19 919 45 HOH HOH . 
H 7 HOH A 20 920 74 HOH HOH . 
H 7 HOH A 21 921 35 HOH HOH . 
H 7 HOH A 22 922 9 HOH HOH . 
H 7 HOH A 23 923 83 HOH HOH . 
H 7 HOH A 24 924 56 HOH HOH . 
H 7 HOH A 25 925 30 HOH HOH . 
H 7 HOH A 26 926 14 HOH HOH . 
H 7 HOH A 27 927 20 HOH HOH . 
H 7 HOH A 28 928 44 HOH HOH . 
H 7 HOH A 29 929 59 HOH HOH . 
H 7 HOH A 30 930 28 HOH HOH . 
H 7 HOH A 31 931 2 HOH HOH . 
H 7 HOH A 32 932 68 HOH HOH . 
H 7 HOH A 33 933 5 HOH HOH . 
H 7 HOH A 34 934 18 HOH HOH . 
H 7 HOH A 35 935 55 HOH HOH . 
H 7 HOH A 36 936 12 HOH HOH . 
H 7 HOH A 37 937 37 HOH HOH . 
H 7 HOH A 38 938 19 HOH HOH . 
H 7 HOH A 39 939 8 HOH HOH . 
H 7 HOH A 40 940 70 HOH HOH . 
H 7 HOH A 41 941 16 HOH HOH . 
H 7 HOH A 42 942 76 HOH HOH . 
H 7 HOH A 43 943 80 HOH HOH . 
H 7 HOH A 44 944 77 HOH HOH . 
H 7 HOH A 45 945 27 HOH HOH . 
H 7 HOH A 46 946 71 HOH HOH . 
H 7 HOH A 47 947 48 HOH HOH . 
H 7 HOH A 48 948 47 HOH HOH . 
H 7 HOH A 49 949 61 HOH HOH . 
H 7 HOH A 50 950 31 HOH HOH . 
H 7 HOH A 51 951 75 HOH HOH . 
H 7 HOH A 52 952 81 HOH HOH . 
H 7 HOH A 53 953 72 HOH HOH . 
H 7 HOH A 54 954 38 HOH HOH . 
H 7 HOH A 55 955 53 HOH HOH . 
H 7 HOH A 56 956 10 HOH HOH . 
H 7 HOH A 57 957 21 HOH HOH . 
H 7 HOH A 58 958 66 HOH HOH . 
H 7 HOH A 59 959 41 HOH HOH . 
H 7 HOH A 60 960 67 HOH HOH . 
H 7 HOH A 61 961 33 HOH HOH . 
H 7 HOH A 62 962 32 HOH HOH . 
H 7 HOH A 63 963 40 HOH HOH . 
H 7 HOH A 64 964 82 HOH HOH . 
H 7 HOH A 65 965 65 HOH HOH . 
H 7 HOH A 66 966 13 HOH HOH . 
H 7 HOH A 67 967 63 HOH HOH . 
H 7 HOH A 68 968 52 HOH HOH . 
H 7 HOH A 69 969 62 HOH HOH . 
H 7 HOH A 70 970 29 HOH HOH . 
H 7 HOH A 71 971 57 HOH HOH . 
H 7 HOH A 72 972 34 HOH HOH . 
H 7 HOH A 73 973 85 HOH HOH . 
H 7 HOH A 74 974 58 HOH HOH . 
H 7 HOH A 75 975 43 HOH HOH . 
H 7 HOH A 76 976 39 HOH HOH . 
H 7 HOH A 77 977 64 HOH HOH . 
H 7 HOH A 78 978 49 HOH HOH . 
H 7 HOH A 79 979 15 HOH HOH . 
H 7 HOH A 80 980 42 HOH HOH . 
H 7 HOH A 81 981 73 HOH HOH . 
H 7 HOH A 82 982 46 HOH HOH . 
H 7 HOH A 83 983 54 HOH HOH . 
H 7 HOH A 84 984 84 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C13 O9J . . . G 6 8.138 -17.018 -15.501 1 26.5 ? C13 O9J 806 A 1 
HETATM 2 C C15 O9J . . . G 6 5.435 -10.658 -17.836 1 30.11 ? C15 O9J 806 A 1 
HETATM 3 C C22 O9J . . . G 6 2.65 -8.345 -20.987 1 33.52 ? C22 O9J 806 A 1 
HETATM 4 C C24 O9J . . . G 6 2.69 -9.531 -23.086 1 30.96 ? C24 O9J 806 A 1 
HETATM 5 C C26 O9J . . . G 6 0.9 -7.97 -22.611 1 30.73 ? C26 O9J 806 A 1 
HETATM 6 C C01 O9J . . . G 6 7.351 -13.651 -21.448 1 25.58 ? C01 O9J 806 A 1 
HETATM 7 C C02 O9J . . . G 6 7.137 -13.396 -19.961 1 25.84 ? C02 O9J 806 A 1 
HETATM 8 C C03 O9J . . . G 6 6.45 -12.229 -19.579 1 25.51 ? C03 O9J 806 A 1 
HETATM 9 C C05 O9J . . . G 6 6.242 -11.928 -18.231 1 24.6 ? C05 O9J 806 A 1 
HETATM 10 C C06 O9J . . . G 6 6.7 -12.808 -17.253 1 25.22 ? C06 O9J 806 A 1 
HETATM 11 C C07 O9J . . . G 6 7.388 -13.98 -17.633 1 23.9 ? C07 O9J 806 A 1 
HETATM 12 C C08 O9J . . . G 6 7.622 -14.279 -18.982 1 22.65 ? C08 O9J 806 A 1 
HETATM 13 C C09 O9J . . . G 6 7.878 -14.883 -16.511 1 24.75 ? C09 O9J 806 A 1 
HETATM 14 C C11 O9J . . . G 6 8.945 -14.972 -14.466 1 24.35 ? C11 O9J 806 A 1 
HETATM 15 C C12 O9J . . . G 6 8.775 -16.353 -14.439 1 24.27 ? C12 O9J 806 A 1 
HETATM 16 C C14 O9J . . . G 6 7.667 -16.254 -16.583 1 24.39 ? C14 O9J 806 A 1 
HETATM 17 C C23 O9J . . . G 6 3.267 -9.262 -21.839 1 28.27 ? C23 O9J 806 A 1 
HETATM 18 C C25 O9J . . . G 6 1.512 -8.888 -23.466 1 33.27 ? C25 O9J 806 A 1 
HETATM 19 C C27 O9J . . . G 6 1.477 -7.703 -21.369 1 33.98 ? C27 O9J 806 A 1 
HETATM 20 F F04 O9J . . . G 6 6.024 -11.402 -20.532 1 28.19 ? F04 O9J 806 A 1 
HETATM 21 N N10 O9J . . . G 6 8.486 -14.296 -15.499 1 24.41 ? N10 O9J 806 A 1 
HETATM 22 N N17 O9J . . . G 6 4.243 -10.409 -18.62 1 29.58 ? N17 O9J 806 A 1 
HETATM 23 N N18 O9J . . . G 6 3.382 -9.313 -18.388 1 33.08 ? N18 O9J 806 A 1 
HETATM 24 O O16 O9J . . . G 6 5.763 -9.947 -16.897 1 29.37 ? O16 O9J 806 A 1 
HETATM 25 O O20 O9J . . . G 6 2.82 -6.813 -18.781 1 31.85 ? O20 O9J 806 A 1 
HETATM 26 O O21 O9J . . . G 6 4.773 -7.554 -19.611 1 31.43 ? O21 O9J 806 A 1 
HETATM 27 S S19 O9J . . . G 6 3.412 -7.98 -19.381 1 35.33 ? S19 O9J 806 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           238 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           27 
#