data_6PDH
#
_model_server_result.job_id            jN8jsKiW8CKrebJV_ozCPw 
_model_server_result.datetime_utc      '2024-12-26 14:26:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6pdh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    6PDH 
#
_exptl.entry_id    6PDH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              388.462 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-[4-(4-cyano-3-methylphenoxy)phenyl]-N-ethyl-N-[2-(1H-pyrazol-1-yl)ethyl]acetamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          118.113 
_cell.angle_gamma         90 
_cell.entry_id            6PDH 
_cell.length_a            119.214 
_cell.length_b            50.295 
_cell.length_c            91.98 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6PDH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    'C 2y' 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E 1 1 
B,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 30 A CYS 30 1_555 A SG CYS 33 A CYS 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? 
disulf ? disulf2 B SG CYS 30 B CYS 30 1_555 B SG CYS 33 B CYS 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? 
#
_chem_comp.formula           'C23 H24 N4 O2' 
_chem_comp.formula_weight    388.462 
_chem_comp.id                OAV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-[4-(4-cyano-3-methylphenoxy)phenyl]-N-ethyl-N-[2-(1H-pyrazol-1-yl)ethyl]acetamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C27 C25 OAV sing 237 n n 
N29 C28 OAV trip 238 n n 
C25 C26 OAV doub 239 n y 
C25 C24 OAV sing 240 n y 
C28 C24 OAV sing 241 n n 
C26 C21 OAV sing 242 n y 
C24 C23 OAV doub 243 n y 
C21 O20 OAV sing 244 n n 
C21 C22 OAV doub 245 n y 
C23 C22 OAV sing 246 n y 
O20 C17 OAV sing 247 n n 
C17 C16 OAV doub 248 n y 
C17 C18 OAV sing 249 n y 
C16 C15 OAV sing 250 n y 
C18 C19 OAV doub 251 n y 
C15 C14 OAV doub 252 n y 
C19 C14 OAV sing 253 n y 
C14 C13 OAV sing 254 n n 
C13 C11 OAV sing 255 n n 
O12 C11 OAV doub 256 n n 
C11 N03 OAV sing 257 n n 
C01 C02 OAV sing 258 n n 
C08 C09 OAV sing 259 n y 
C08 C07 OAV doub 260 n y 
N03 C02 OAV sing 261 n n 
N03 C04 OAV sing 262 n n 
C09 N10 OAV doub 263 n y 
C07 N06 OAV sing 264 n y 
N10 N06 OAV sing 265 n y 
C04 C05 OAV sing 266 n n 
N06 C05 OAV sing 267 n n 
C13 H1 OAV sing 268 n n 
C13 H2 OAV sing 269 n n 
C18 H3 OAV sing 270 n n 
C19 H4 OAV sing 271 n n 
C22 H5 OAV sing 272 n n 
C23 H6 OAV sing 273 n n 
C01 H7 OAV sing 274 n n 
C01 H8 OAV sing 275 n n 
C01 H9 OAV sing 276 n n 
C02 H10 OAV sing 277 n n 
C02 H11 OAV sing 278 n n 
C04 H12 OAV sing 279 n n 
C04 H13 OAV sing 280 n n 
C05 H14 OAV sing 281 n n 
C05 H15 OAV sing 282 n n 
C07 H16 OAV sing 283 n n 
C08 H17 OAV sing 284 n n 
C09 H18 OAV sing 285 n n 
C15 H19 OAV sing 286 n n 
C16 H20 OAV sing 287 n n 
C26 H21 OAV sing 288 n n 
C27 H22 OAV sing 289 n n 
C27 H23 OAV sing 290 n n 
C27 H24 OAV sing 291 n n 
#
_atom_sites.entry_id                     6PDH 
_atom_sites.fract_transf_matrix[1][1]    0.008388 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004481 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019883 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012326 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 OAV A 1 201 201 OAV 690 . 
D 3 PGE A 1 202 301 PGE PGE . 
E 4 HOH A 1 301 88 HOH HOH . 
E 4 HOH A 2 302 64 HOH HOH . 
E 4 HOH A 3 303 56 HOH HOH . 
E 4 HOH A 4 304 5 HOH HOH . 
E 4 HOH A 5 305 94 HOH HOH . 
E 4 HOH A 6 306 126 HOH HOH . 
E 4 HOH A 7 307 7 HOH HOH . 
E 4 HOH A 8 308 129 HOH HOH . 
E 4 HOH A 9 309 14 HOH HOH . 
E 4 HOH A 10 310 128 HOH HOH . 
E 4 HOH A 11 311 44 HOH HOH . 
E 4 HOH A 12 312 42 HOH HOH . 
E 4 HOH A 13 313 61 HOH HOH . 
E 4 HOH A 14 314 9 HOH HOH . 
E 4 HOH A 15 315 32 HOH HOH . 
E 4 HOH A 16 316 49 HOH HOH . 
E 4 HOH A 17 317 136 HOH HOH . 
E 4 HOH A 18 318 58 HOH HOH . 
E 4 HOH A 19 319 65 HOH HOH . 
E 4 HOH A 20 320 12 HOH HOH . 
E 4 HOH A 21 321 1 HOH HOH . 
E 4 HOH A 22 322 10 HOH HOH . 
E 4 HOH A 23 323 98 HOH HOH . 
E 4 HOH A 24 324 15 HOH HOH . 
E 4 HOH A 25 325 81 HOH HOH . 
E 4 HOH A 26 326 83 HOH HOH . 
E 4 HOH A 27 327 25 HOH HOH . 
E 4 HOH A 28 328 68 HOH HOH . 
E 4 HOH A 29 329 78 HOH HOH . 
E 4 HOH A 30 330 48 HOH HOH . 
E 4 HOH A 31 331 51 HOH HOH . 
E 4 HOH A 32 332 100 HOH HOH . 
E 4 HOH A 33 333 31 HOH HOH . 
E 4 HOH A 34 334 43 HOH HOH . 
E 4 HOH A 35 335 123 HOH HOH . 
E 4 HOH A 36 336 35 HOH HOH . 
E 4 HOH A 37 337 18 HOH HOH . 
E 4 HOH A 38 338 113 HOH HOH . 
E 4 HOH A 39 339 52 HOH HOH . 
E 4 HOH A 40 340 95 HOH HOH . 
E 4 HOH A 41 341 112 HOH HOH . 
E 4 HOH A 42 342 23 HOH HOH . 
E 4 HOH A 43 343 97 HOH HOH . 
E 4 HOH A 44 344 117 HOH HOH . 
E 4 HOH A 45 345 134 HOH HOH . 
E 4 HOH A 46 346 135 HOH HOH . 
E 4 HOH A 47 347 33 HOH HOH . 
E 4 HOH A 48 348 21 HOH HOH . 
E 4 HOH A 49 349 114 HOH HOH . 
E 4 HOH A 50 350 85 HOH HOH . 
E 4 HOH A 51 351 53 HOH HOH . 
E 4 HOH A 52 352 102 HOH HOH . 
E 4 HOH A 53 353 84 HOH HOH . 
E 4 HOH A 54 354 77 HOH HOH . 
E 4 HOH A 55 355 57 HOH HOH . 
E 4 HOH A 56 356 66 HOH HOH . 
E 4 HOH A 57 357 50 HOH HOH . 
E 4 HOH A 58 358 55 HOH HOH . 
E 4 HOH A 59 359 63 HOH HOH . 
F 4 HOH B 1 201 119 HOH HOH . 
F 4 HOH B 2 202 69 HOH HOH . 
F 4 HOH B 3 203 19 HOH HOH . 
F 4 HOH B 4 204 17 HOH HOH . 
F 4 HOH B 5 205 4 HOH HOH . 
F 4 HOH B 6 206 2 HOH HOH . 
F 4 HOH B 7 207 121 HOH HOH . 
F 4 HOH B 8 208 6 HOH HOH . 
F 4 HOH B 9 209 59 HOH HOH . 
F 4 HOH B 10 210 104 HOH HOH . 
F 4 HOH B 11 211 29 HOH HOH . 
F 4 HOH B 12 212 89 HOH HOH . 
F 4 HOH B 13 213 38 HOH HOH . 
F 4 HOH B 14 214 41 HOH HOH . 
F 4 HOH B 15 215 131 HOH HOH . 
F 4 HOH B 16 216 116 HOH HOH . 
F 4 HOH B 17 217 72 HOH HOH . 
F 4 HOH B 18 218 30 HOH HOH . 
F 4 HOH B 19 219 13 HOH HOH . 
F 4 HOH B 20 220 34 HOH HOH . 
F 4 HOH B 21 221 70 HOH HOH . 
F 4 HOH B 22 222 101 HOH HOH . 
F 4 HOH B 23 223 75 HOH HOH . 
F 4 HOH B 24 224 37 HOH HOH . 
F 4 HOH B 25 225 22 HOH HOH . 
F 4 HOH B 26 226 93 HOH HOH . 
F 4 HOH B 27 227 87 HOH HOH . 
F 4 HOH B 28 228 133 HOH HOH . 
F 4 HOH B 29 229 27 HOH HOH . 
F 4 HOH B 30 230 20 HOH HOH . 
F 4 HOH B 31 231 26 HOH HOH . 
F 4 HOH B 32 232 16 HOH HOH . 
F 4 HOH B 33 233 39 HOH HOH . 
F 4 HOH B 34 234 92 HOH HOH . 
F 4 HOH B 35 235 91 HOH HOH . 
F 4 HOH B 36 236 76 HOH HOH . 
F 4 HOH B 37 237 24 HOH HOH . 
F 4 HOH B 38 238 124 HOH HOH . 
F 4 HOH B 39 239 96 HOH HOH . 
F 4 HOH B 40 240 71 HOH HOH . 
F 4 HOH B 41 241 82 HOH HOH . 
F 4 HOH B 42 242 36 HOH HOH . 
F 4 HOH B 43 243 74 HOH HOH . 
F 4 HOH B 44 244 80 HOH HOH . 
F 4 HOH B 45 245 86 HOH HOH . 
F 4 HOH B 46 246 54 HOH HOH . 
F 4 HOH B 47 247 45 HOH HOH . 
F 4 HOH B 48 248 40 HOH HOH . 
F 4 HOH B 49 249 73 HOH HOH . 
F 4 HOH B 50 250 130 HOH HOH . 
F 4 HOH B 51 251 103 HOH HOH . 
F 4 HOH B 52 252 47 HOH HOH . 
F 4 HOH B 53 253 105 HOH HOH . 
F 4 HOH B 54 254 67 HOH HOH . 
F 4 HOH B 55 255 90 HOH HOH . 
F 4 HOH B 56 256 28 HOH HOH . 
F 4 HOH B 57 257 125 HOH HOH . 
F 4 HOH B 58 258 109 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C25 OAV . . . C 2 40.927 6.382 11.732 1 47.72 ? C25 OAV 201 A 1 
HETATM 2 C C28 OAV . . . C 2 41.034 8.786 11.85 1 50.36 ? C28 OAV 201 A 1 
HETATM 3 C C13 OAV . . . C 2 35.757 3.348 18.506 1 49.3 ? C13 OAV 201 A 1 
HETATM 4 C C14 OAV . . . C 2 36.787 3.456 17.377 1 50.08 ? C14 OAV 201 A 1 
HETATM 5 C C18 OAV . . . C 2 38.933 3.152 16.21 1 60.36 ? C18 OAV 201 A 1 
HETATM 6 C C19 OAV . . . C 2 38.104 2.973 17.331 1 53.57 ? C19 OAV 201 A 1 
HETATM 7 C C21 OAV . . . C 2 39.758 5.161 13.482 1 50.43 ? C21 OAV 201 A 1 
HETATM 8 C C22 OAV . . . C 2 39.461 6.372 14.132 1 42.76 ? C22 OAV 201 A 1 
HETATM 9 C C23 OAV . . . C 2 39.884 7.567 13.584 1 41.51 ? C23 OAV 201 A 1 
HETATM 10 C C01 OAV . . . C 2 33.181 2.757 20.826 1 56.18 ? C01 OAV 201 A 1 
HETATM 11 C C02 OAV . . . C 2 34.679 2.722 21.211 1 60.83 ? C02 OAV 201 A 1 
HETATM 12 C C04 OAV . . . C 2 35.609 4.967 22.084 1 50.74 ? C04 OAV 201 A 1 
HETATM 13 C C05 OAV . . . C 2 36.821 4.728 23.012 1 57.92 ? C05 OAV 201 A 1 
HETATM 14 C C07 OAV . . . C 2 38.436 3.319 21.498 1 57.31 ? C07 OAV 201 A 1 
HETATM 15 C C08 OAV . . . C 2 39.637 3.63 20.855 1 60.43 ? C08 OAV 201 A 1 
HETATM 16 C C09 OAV . . . C 2 39.906 4.999 21.177 1 60.26 ? C09 OAV 201 A 1 
HETATM 17 C C11 OAV . . . C 2 35.915 4.296 19.684 1 46.89 ? C11 OAV 201 A 1 
HETATM 18 C C15 OAV . . . C 2 36.386 4.121 16.227 1 43.42 ? C15 OAV 201 A 1 
HETATM 19 C C16 OAV . . . C 2 37.184 4.31 15.097 1 52.57 ? C16 OAV 201 A 1 
HETATM 20 C C17 OAV . . . C 2 38.494 3.826 15.063 1 59.92 ? C17 OAV 201 A 1 
HETATM 21 C C24 OAV . . . C 2 40.621 7.565 12.386 1 38.8 ? C24 OAV 201 A 1 
HETATM 22 C C26 OAV . . . C 2 40.489 5.201 12.302 1 48.92 ? C26 OAV 201 A 1 
HETATM 23 C C27 OAV . . . C 2 41.723 6.438 10.44 1 48.48 ? C27 OAV 201 A 1 
HETATM 24 N N03 OAV . . . C 2 35.401 3.997 20.984 1 52.42 ? N03 OAV 201 A 1 
HETATM 25 N N06 OAV . . . C 2 38.034 4.486 22.177 1 60.72 ? N06 OAV 201 A 1 
HETATM 26 N N10 OAV . . . C 2 38.917 5.513 21.979 1 64.19 ? N10 OAV 201 A 1 
HETATM 27 N N29 OAV . . . C 2 41.401 9.792 11.374 1 63.92 ? N29 OAV 201 A 1 
HETATM 28 O O12 OAV . . . C 2 36.504 5.352 19.535 1 48.03 ? O12 OAV 201 A 1 
HETATM 29 O O20 OAV . . . C 2 39.37 3.952 13.993 1 62.8 ? O20 OAV 201 A 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           26 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           349 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           29 
#