data_6PDX # _model_server_result.job_id 6hK5uA-5n5xvYV0I6V11ww _model_server_result.datetime_utc '2024-11-26 13:02:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6pdx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"BA","auth_seq_id":601}' # _entry.id 6PDX # _exptl.entry_id 6PDX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.208 _entity.id 6 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6PDX _cell.length_a 287.265 _cell.length_b 287.265 _cell.length_c 182.933 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PDX _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details nonameric _pdbx_struct_assembly.oligomeric_count 9 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id BA _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 4 oligosaccharide 5 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 4 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 4 3 2 BMA NAG C1 O1 . O4 HO4 . sing 3 ? 5 2 1 NAG NAG C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 4 n J NAG 1 D 1 NAG A 1024 NAG 4 n J NAG 2 D 2 NAG A 1025 NAG 4 n J BMA 3 D 3 BMA A 1026 BMA 4 n K NAG 1 E 1 NAG A 1027 NAG 4 n K NAG 2 E 2 NAG A 1028 NAG 4 n K BMA 3 E 3 BMA A 1029 BMA 5 n L NAG 1 F 1 NAG A 1030 NAG 5 n L NAG 2 F 2 NAG A 1031 NAG 4 n M NAG 1 G 1 NAG A 1032 NAG 4 n M NAG 2 G 2 NAG A 1033 NAG 4 n M BMA 3 G 3 BMA A 1034 BMA 4 n N NAG 1 I 1 NAG A 1035 NAG 4 n N NAG 2 I 2 NAG A 1036 NAG 4 n N BMA 3 I 3 BMA A 1037 BMA 4 n O NAG 1 J 1 NAG A 1038 NAG 4 n O NAG 2 J 2 NAG A 1039 NAG 4 n O BMA 3 J 3 BMA A 1040 BMA 4 n P NAG 1 K 1 NAG A 1041 NAG 4 n P NAG 2 K 2 NAG A 1042 NAG 4 n P BMA 3 K 3 BMA A 1043 BMA 4 n Q NAG 1 Q 1 NAG B 1015 NAG 4 n Q NAG 2 Q 2 NAG B 1016 NAG 4 n Q BMA 3 Q 3 BMA B 1017 BMA 4 n R NAG 1 R 1 NAG B 1018 NAG 4 n R NAG 2 R 2 NAG B 1019 NAG 4 n R BMA 3 R 3 BMA B 1020 BMA 5 n S NAG 1 S 1 NAG B 1021 NAG 5 n S NAG 2 S 2 NAG B 1022 NAG 5 n T NAG 1 T 1 NAG B 1023 NAG 5 n T NAG 2 T 2 NAG B 1024 NAG 4 n U NAG 1 U 1 NAG B 1025 NAG 4 n U NAG 2 U 2 NAG B 1026 NAG 4 n U BMA 3 U 3 BMA B 1027 BMA 5 n V NAG 1 V 1 NAG B 1028 NAG 5 n V NAG 2 V 2 NAG B 1029 NAG 4 n W NAG 1 W 1 NAG C 1008 NAG 4 n W NAG 2 W 2 NAG C 1009 NAG 4 n W BMA 3 W 3 BMA C 1010 BMA 4 n X NAG 1 X 1 NAG C 1011 NAG 4 n X NAG 2 X 2 NAG C 1012 NAG 4 n X BMA 3 X 3 BMA C 1013 BMA 4 n Y NAG 1 Y 1 NAG C 1014 NAG 4 n Y NAG 2 Y 2 NAG C 1015 NAG 4 n Y BMA 3 Y 3 BMA C 1016 BMA 4 n Z NAG 1 Z 1 NAG C 1017 NAG 4 n Z NAG 2 Z 2 NAG C 1018 NAG 4 n Z BMA 3 Z 3 BMA C 1019 BMA 5 n AA NAG 1 a 1 NAG C 1020 NAG 5 n AA NAG 2 a 2 NAG C 1021 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 14 A CYS 14 1_555 A SG CYS 466 A CYS 466 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 A SG CYS 52 A CYS 52 1_555 A SG CYS 277 A CYS 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 76 A CYS 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf4 A SG CYS 97 A CYS 97 1_555 A SG CYS 139 A CYS 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 A SG CYS 281 A CYS 281 1_555 A SG CYS 305 A CYS 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf6 A SG CYS 473 A CYS 473 1_555 A SG CYS 477 A CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf7 B SG CYS 22 H CYS 22 1_555 B SG CYS 95 H CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf8 B SG CYS 156 H CYS 156 1_555 B SG CYS 212 H CYS 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf9 C SG CYS 22 L CYS 22 1_555 C SG CYS 89 L CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf10 C SG CYS 137 L CYS 137 1_555 C SG CYS 196 L CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf11 D SG CYS 14 B CYS 14 1_555 D SG CYS 466 B CYS 466 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf12 D SG CYS 52 B CYS 52 1_555 D SG CYS 277 B CYS 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf13 D SG CYS 64 B CYS 64 1_555 D SG CYS 76 B CYS 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf14 D SG CYS 97 B CYS 97 1_555 D SG CYS 139 B CYS 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf15 D SG CYS 281 B CYS 281 1_555 D SG CYS 305 B CYS 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf16 D SG CYS 473 B CYS 473 1_555 D SG CYS 477 B CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf17 E SG CYS 22 M CYS 22 1_555 E SG CYS 95 M CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf18 E SG CYS 156 M CYS 156 1_555 E SG CYS 212 M CYS 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf19 F SG CYS 22 N CYS 22 1_555 F SG CYS 89 N CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf20 F SG CYS 137 N CYS 137 1_555 F SG CYS 196 N CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf21 G SG CYS 14 C CYS 14 1_555 G SG CYS 466 C CYS 466 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf22 G SG CYS 52 C CYS 52 1_555 G SG CYS 277 C CYS 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf23 G SG CYS 64 C CYS 64 1_555 G SG CYS 76 C CYS 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf24 G SG CYS 97 C CYS 97 1_555 G SG CYS 139 C CYS 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf25 G SG CYS 281 C CYS 281 1_555 G SG CYS 305 C CYS 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf26 G SG CYS 473 C CYS 473 1_555 G SG CYS 477 C CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf27 H SG CYS 22 O CYS 22 1_555 H SG CYS 95 O CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf28 H SG CYS 156 O CYS 156 1_555 H SG CYS 212 O CYS 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf29 I SG CYS 22 P CYS 22 1_555 I SG CYS 89 P CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf30 I SG CYS 137 P CYS 137 1_555 I SG CYS 196 P CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? covale ? covale1 A ND2 ASN 38 A ASN 38 1_555 M C1 NAG . G NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale2 A ND2 ASN 63 A ASN 63 1_555 N C1 NAG . I NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.411 ? covale ? covale3 A ND2 ASN 133 A ASN 133 1_555 J C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.372 ? covale ? covale4 A ND2 ASN 165 A ASN 165 1_555 K C1 NAG . E NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale5 A ND2 ASN 246 A ASN 246 1_555 O C1 NAG . J NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? covale ? covale6 A ND2 ASN 285 A ASN 285 1_555 L C1 NAG . F NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.409 ? covale ? covale7 A ND2 ASN 483 A ASN 483 1_555 P C1 NAG . K NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? covale ? covale8 D ND2 ASN 38 B ASN 38 1_555 T C1 NAG . T NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.412 ? covale ? covale9 D ND2 ASN 63 B ASN 63 1_555 V C1 NAG . V NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale10 D ND2 ASN 133 B ASN 133 1_555 U C1 NAG . U NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? covale ? covale11 D ND2 ASN 165 B ASN 165 1_555 R C1 NAG . R NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.455 ? covale ? covale12 D ND2 ASN 246 B ASN 246 1_555 Q C1 NAG . Q NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale13 D ND2 ASN 285 B ASN 285 1_555 S C1 NAG . S NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale14 D ND2 ASN 483 B ASN 483 1_555 BA C1 NAG . B NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale15 G ND2 ASN 38 C ASN 38 1_555 AA C1 NAG . a NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale16 G ND2 ASN 133 C ASN 133 1_555 W C1 NAG . W NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale17 G ND2 ASN 165 C ASN 165 1_555 X C1 NAG . X NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale18 G ND2 ASN 246 C ASN 246 1_555 Y C1 NAG . Y NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale19 G ND2 ASN 285 C ASN 285 1_555 Z C1 NAG . Z NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale20 J O4 NAG . D NAG 1 1_555 J C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.405 ? covale ? covale21 J O4 NAG . D NAG 2 1_555 J C1 BMA . D BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale22 K O4 NAG . E NAG 1 1_555 K C1 NAG . E NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale23 K O4 NAG . E NAG 2 1_555 K C1 BMA . E BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale24 L O4 NAG . F NAG 1 1_555 L C1 NAG . F NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale25 M O4 NAG . G NAG 1 1_555 M C1 NAG . G NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale26 M O4 NAG . G NAG 2 1_555 M C1 BMA . G BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale27 N O4 NAG . I NAG 1 1_555 N C1 NAG . I NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? covale ? covale28 N O4 NAG . I NAG 2 1_555 N C1 BMA . I BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale29 O O4 NAG . J NAG 1 1_555 O C1 NAG . J NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? covale ? covale30 O O4 NAG . J NAG 2 1_555 O C1 BMA . J BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.466 ? covale ? covale31 P O4 NAG . K NAG 1 1_555 P C1 NAG . K NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? covale ? covale32 P O4 NAG . K NAG 2 1_555 P C1 BMA . K BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? covale ? covale33 Q O4 NAG . Q NAG 1 1_555 Q C1 NAG . Q NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale34 Q O4 NAG . Q NAG 2 1_555 Q C1 BMA . Q BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale35 R O4 NAG . R NAG 1 1_555 R C1 NAG . R NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale36 R O4 NAG . R NAG 2 1_555 R C1 BMA . R BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale37 S O4 NAG . S NAG 1 1_555 S C1 NAG . S NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale38 T O4 NAG . T NAG 1 1_555 T C1 NAG . T NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.47 ? covale ? covale39 U O4 NAG . U NAG 1 1_555 U C1 NAG . U NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? covale ? covale40 U O4 NAG . U NAG 2 1_555 U C1 BMA . U BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.47 ? covale ? covale41 V O4 NAG . V NAG 1 1_555 V C1 NAG . V NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale42 W O4 NAG . W NAG 1 1_555 W C1 NAG . W NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale43 W O4 NAG . W NAG 2 1_555 W C1 BMA . W BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale44 X O4 NAG . X NAG 1 1_555 X C1 NAG . X NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale45 X O4 NAG . X NAG 2 1_555 X C1 BMA . X BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale46 Y O4 NAG . Y NAG 1 1_555 Y C1 NAG . Y NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale47 Y O4 NAG . Y NAG 2 1_555 Y C1 BMA . Y BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale48 Z O4 NAG . Z NAG 1 1_555 Z C1 NAG . Z NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale49 Z O4 NAG . Z NAG 2 1_555 Z C1 BMA . Z BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale50 AA O4 NAG . a NAG 1 1_555 AA C1 NAG . a NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NAG sing 259 n n C1 O1 NAG sing 260 n n C1 O5 NAG sing 261 n n C1 H1 NAG sing 262 n n C2 C3 NAG sing 263 n n C2 N2 NAG sing 264 n n C2 H2 NAG sing 265 n n C3 C4 NAG sing 266 n n C3 O3 NAG sing 267 n n C3 H3 NAG sing 268 n n C4 C5 NAG sing 269 n n C4 O4 NAG sing 270 n n C4 H4 NAG sing 271 n n C5 C6 NAG sing 272 n n C5 O5 NAG sing 273 n n C5 H5 NAG sing 274 n n C6 O6 NAG sing 275 n n C6 H61 NAG sing 276 n n C6 H62 NAG sing 277 n n C7 C8 NAG sing 278 n n C7 N2 NAG sing 279 n n C7 O7 NAG doub 280 n n C8 H81 NAG sing 281 n n C8 H82 NAG sing 282 n n C8 H83 NAG sing 283 n n N2 HN2 NAG sing 284 n n O1 HO1 NAG sing 285 n n O3 HO3 NAG sing 286 n n O4 HO4 NAG sing 287 n n O6 HO6 NAG sing 288 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 6PDX _atom_sites.fract_transf_matrix[1][1] 0.003481 _atom_sites.fract_transf_matrix[1][2] 0.00201 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00402 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005466 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id BA _pdbx_nonpoly_scheme.entity_id 6 _pdbx_nonpoly_scheme.mon_id NAG _pdbx_nonpoly_scheme.pdb_strand_id B _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 601 _pdbx_nonpoly_scheme.auth_seq_num 503 _pdbx_nonpoly_scheme.pdb_mon_id NAG _pdbx_nonpoly_scheme.auth_mon_id NAG _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . BA 6 -71.293 25.82 8.286 1 183.22 ? C1 NAG 601 B 1 HETATM 2 C C2 NAG . . . BA 6 -70.661 25.068 9.473 1 209.23 ? C2 NAG 601 B 1 HETATM 3 C C3 NAG . . . BA 6 -70.879 23.557 9.336 1 188.19 ? C3 NAG 601 B 1 HETATM 4 C C4 NAG . . . BA 6 -72.34 23.233 9.055 1 173.68 ? C4 NAG 601 B 1 HETATM 5 C C5 NAG . . . BA 6 -72.826 24.039 7.859 1 190.5 ? C5 NAG 601 B 1 HETATM 6 C C6 NAG . . . BA 6 -74.283 23.813 7.534 1 199.78 ? C6 NAG 601 B 1 HETATM 7 C C7 NAG . . . BA 6 -68.693 26.112 10.531 1 209.14 ? C7 NAG 601 B 1 HETATM 8 C C8 NAG . . . BA 6 -69.64 26.658 11.558 1 188.07 ? C8 NAG 601 B 1 HETATM 9 N N2 NAG . . . BA 6 -69.239 25.364 9.565 1 226.06 ? N2 NAG 601 B 1 HETATM 10 O O3 NAG . . . BA 6 -70.467 22.906 10.532 1 170.75 ? O3 NAG 601 B 1 HETATM 11 O O4 NAG . . . BA 6 -72.483 21.844 8.777 1 149.12 ? O4 NAG 601 B 1 HETATM 12 O O5 NAG . . . BA 6 -72.669 25.435 8.142 1 180.11 ? O5 NAG 601 B 1 HETATM 13 O O6 NAG . . . BA 6 -74.673 24.549 6.383 1 199.68 ? O6 NAG 601 B 1 HETATM 14 O O7 NAG . . . BA 6 -67.487 26.338 10.573 1 195.84 ? O7 NAG 601 B 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 18 _model_server_stats.element_count 14 #