data_6PEE
#
_model_server_result.job_id            yUIWersMtwyQjIAp7KCjtA 
_model_server_result.datetime_utc      '2025-09-12 09:02:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6pee 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"DB","auth_seq_id":1002}' 
#
_entry.id    6PEE 
#
_exptl.entry_id    6PEE 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              229.402 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'LAURYL DIMETHYLAMINE-N-OXIDE' 
_entity.pdbx_number_of_molecules    45 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6PEE 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6PEE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
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_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentadecameric 
_pdbx_struct_assembly.oligomeric_count      15 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 P N N 
? 2 Q N N 
? 2 R N N 
? 2 S N N 
? 2 T N N 
? 2 U N N 
? 2 V N N 
? 2 W N N 
? 2 X N N 
? 2 Y N N 
? 2 Z N N 
? 2 AA N N 
? 2 BA N N 
? 2 CA N N 
? 2 DA N N 
? 2 EA N N 
? 2 FA N N 
? 2 GA N N 
? 2 HA N N 
? 2 IA N N 
? 2 JA N N 
? 2 KA N N 
? 2 LA N N 
? 2 MA N N 
? 2 NA N N 
? 2 OA N N 
? 2 PA N N 
? 2 QA N N 
? 2 RA N N 
? 2 SA N N 
? 2 TA N N 
? 2 UA N N 
? 2 VA N N 
? 2 WA N N 
? 2 XA N N 
? 2 YA N N 
? 2 ZA N N 
? 2 AB N N 
? 2 BB N N 
? 2 CB N N 
? 2 DB N N 
? 2 EB N N 
? 2 FB N N 
? 2 GB N N 
? 2 HB N N 
#
_chem_comp.formula           'C14 H31 N O' 
_chem_comp.formula_weight    229.402 
_chem_comp.id                LDA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'LAURYL DIMETHYLAMINE-N-OXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 O1 LDA sing 171 n n 
N1 CM1 LDA sing 172 n n 
N1 CM2 LDA sing 173 n n 
N1 C1 LDA sing 174 n n 
CM1 HM11 LDA sing 175 n n 
CM1 HM12 LDA sing 176 n n 
CM1 HM13 LDA sing 177 n n 
CM2 HM21 LDA sing 178 n n 
CM2 HM22 LDA sing 179 n n 
CM2 HM23 LDA sing 180 n n 
C1 C2 LDA sing 181 n n 
C1 H11 LDA sing 182 n n 
C1 H12 LDA sing 183 n n 
C2 C3 LDA sing 184 n n 
C2 H21 LDA sing 185 n n 
C2 H22 LDA sing 186 n n 
C3 C4 LDA sing 187 n n 
C3 H31 LDA sing 188 n n 
C3 H32 LDA sing 189 n n 
C4 C5 LDA sing 190 n n 
C4 H41 LDA sing 191 n n 
C4 H42 LDA sing 192 n n 
C5 C6 LDA sing 193 n n 
C5 H51 LDA sing 194 n n 
C5 H52 LDA sing 195 n n 
C6 C7 LDA sing 196 n n 
C6 H61 LDA sing 197 n n 
C6 H62 LDA sing 198 n n 
C7 C8 LDA sing 199 n n 
C7 H71 LDA sing 200 n n 
C7 H72 LDA sing 201 n n 
C8 C9 LDA sing 202 n n 
C8 H81 LDA sing 203 n n 
C8 H82 LDA sing 204 n n 
C9 C10 LDA sing 205 n n 
C9 H91 LDA sing 206 n n 
C9 H92 LDA sing 207 n n 
C10 C11 LDA sing 208 n n 
C10 H101 LDA sing 209 n n 
C10 H102 LDA sing 210 n n 
C11 C12 LDA sing 211 n n 
C11 H111 LDA sing 212 n n 
C11 H112 LDA sing 213 n n 
C12 H121 LDA sing 214 n n 
C12 H122 LDA sing 215 n n 
C12 H123 LDA sing 216 n n 
#
_atom_sites.entry_id                     6PEE 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
P 2 LDA A 1 1001 1001 LDA LDA . 
Q 2 LDA A 1 1002 1003 LDA LDA . 
R 2 LDA A 1 1003 1002 LDA LDA . 
S 2 LDA B 1 1001 1001 LDA LDA . 
T 2 LDA B 1 1002 1003 LDA LDA . 
U 2 LDA B 1 1003 1002 LDA LDA . 
V 2 LDA C 1 1001 1001 LDA LDA . 
W 2 LDA C 1 1002 1003 LDA LDA . 
X 2 LDA C 1 1003 1002 LDA LDA . 
Y 2 LDA D 1 1001 1001 LDA LDA . 
Z 2 LDA D 1 1002 1003 LDA LDA . 
AA 2 LDA D 1 1003 1002 LDA LDA . 
BA 2 LDA F 1 1001 1001 LDA LDA . 
CA 2 LDA F 1 1002 1003 LDA LDA . 
DA 2 LDA F 1 1003 1002 LDA LDA . 
EA 2 LDA G 1 1001 1001 LDA LDA . 
FA 2 LDA G 1 1002 1003 LDA LDA . 
GA 2 LDA G 1 1003 1002 LDA LDA . 
HA 2 LDA H 1 1001 1001 LDA LDA . 
IA 2 LDA H 1 1002 1003 LDA LDA . 
JA 2 LDA H 1 1003 1002 LDA LDA . 
KA 2 LDA I 1 1001 1001 LDA LDA . 
LA 2 LDA I 1 1002 1003 LDA LDA . 
MA 2 LDA I 1 1003 1002 LDA LDA . 
NA 2 LDA J 1 1001 1001 LDA LDA . 
OA 2 LDA J 1 1002 1003 LDA LDA . 
PA 2 LDA J 1 1003 1002 LDA LDA . 
QA 2 LDA K 1 1001 1001 LDA LDA . 
RA 2 LDA K 1 1002 1003 LDA LDA . 
SA 2 LDA K 1 1003 1002 LDA LDA . 
TA 2 LDA L 1 1001 1001 LDA LDA . 
UA 2 LDA L 1 1002 1003 LDA LDA . 
VA 2 LDA L 1 1003 1002 LDA LDA . 
WA 2 LDA M 1 1001 1001 LDA LDA . 
XA 2 LDA M 1 1002 1003 LDA LDA . 
YA 2 LDA M 1 1003 1002 LDA LDA . 
ZA 2 LDA N 1 1001 1001 LDA LDA . 
AB 2 LDA N 1 1002 1003 LDA LDA . 
BB 2 LDA N 1 1003 1002 LDA LDA . 
CB 2 LDA O 1 1001 1001 LDA LDA . 
DB 2 LDA O 1 1002 1003 LDA LDA . 
EB 2 LDA O 1 1003 1002 LDA LDA . 
FB 2 LDA P 1 601 1002 LDA LDA . 
GB 2 LDA P 1 602 1001 LDA LDA . 
HB 2 LDA P 1 603 1003 LDA LDA . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 LDA . . . DB 2 145.188 145.918 63.497 1 105.52 ? N1 LDA 1002 O 1 
HETATM 2 O O1 LDA . . . DB 2 144.624 145.236 64.379 1 105.52 ? O1 LDA 1002 O 1 
HETATM 3 C CM1 LDA . . . DB 2 144.914 147.337 63.765 1 105.52 ? CM1 LDA 1002 O 1 
HETATM 4 C CM2 LDA . . . DB 2 144.649 145.581 62.167 1 105.52 ? CM2 LDA 1002 O 1 
HETATM 5 C C1 LDA . . . DB 2 146.626 145.706 63.562 1 105.52 ? C1 LDA 1002 O 1 
HETATM 6 C C2 LDA . . . DB 2 146.879 144.208 63.409 1 105.52 ? C2 LDA 1002 O 1 
HETATM 7 C C3 LDA . . . DB 2 148.275 143.849 63.902 1 105.52 ? C3 LDA 1002 O 1 
HETATM 8 C C4 LDA . . . DB 2 148.668 142.432 63.504 1 105.52 ? C4 LDA 1002 O 1 
HETATM 9 C C5 LDA . . . DB 2 149.896 141.993 64.288 1 105.52 ? C5 LDA 1002 O 1 
HETATM 10 C C6 LDA . . . DB 2 150.409 140.631 63.836 1 105.52 ? C6 LDA 1002 O 1 
HETATM 11 C C7 LDA . . . DB 2 151.904 140.512 64.11 1 105.52 ? C7 LDA 1002 O 1 
HETATM 12 C C8 LDA . . . DB 2 152.509 139.324 63.375 1 105.52 ? C8 LDA 1002 O 1 
HETATM 13 C C9 LDA . . . DB 2 153.984 139.165 63.726 1 105.52 ? C9 LDA 1002 O 1 
#
_model_server_stats.io_time_ms              23 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    41 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           13 
#