data_6PER
#
_model_server_result.job_id            -OQkaJNtzgk3WGIIv9Ce6Q 
_model_server_result.datetime_utc      '2024-10-19 22:41:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6per 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1001}' 
#
_entry.id    6PER 
#
_exptl.entry_id    6PER 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6PER 
_cell.length_a            80.672 
_cell.length_b            99.255 
_cell.length_c            150.558 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6PER 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C LEU 275 A LEU 275 1_555 A N1 CRO 276 A CRO 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.356 ? 
covale ? covale2 A C3 CRO 276 A CRO 277 1_555 A N VAL 277 A VAL 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.381 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 124 n n 
C1 C2 EDO sing 125 n n 
C1 H11 EDO sing 126 n n 
C1 H12 EDO sing 127 n n 
O1 HO1 EDO sing 128 n n 
C2 O2 EDO sing 129 n n 
C2 H21 EDO sing 130 n n 
C2 H22 EDO sing 131 n n 
O2 HO2 EDO sing 132 n n 
#
_atom_sites.entry_id                     6PER 
_atom_sites.fract_transf_matrix[1][1]    0.012396 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010075 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006642 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 1001 1001 EDO EDO . 
C 2 EDO A 1 1002 1002 EDO EDO . 
D 2 EDO A 1 1003 1003 EDO EDO . 
E 2 EDO A 1 1004 1004 EDO EDO . 
F 2 EDO A 1 1005 1005 EDO EDO . 
G 3 HOH A 1 1101 182 HOH HOH . 
G 3 HOH A 2 1102 57 HOH HOH . 
G 3 HOH A 3 1103 187 HOH HOH . 
G 3 HOH A 4 1104 134 HOH HOH . 
G 3 HOH A 5 1105 1 HOH HOH . 
G 3 HOH A 6 1106 136 HOH HOH . 
G 3 HOH A 7 1107 200 HOH HOH . 
G 3 HOH A 8 1108 87 HOH HOH . 
G 3 HOH A 9 1109 135 HOH HOH . 
G 3 HOH A 10 1110 110 HOH HOH . 
G 3 HOH A 11 1111 165 HOH HOH . 
G 3 HOH A 12 1112 171 HOH HOH . 
G 3 HOH A 13 1113 104 HOH HOH . 
G 3 HOH A 14 1114 48 HOH HOH . 
G 3 HOH A 15 1115 8 HOH HOH . 
G 3 HOH A 16 1116 121 HOH HOH . 
G 3 HOH A 17 1117 100 HOH HOH . 
G 3 HOH A 18 1118 31 HOH HOH . 
G 3 HOH A 19 1119 64 HOH HOH . 
G 3 HOH A 20 1120 156 HOH HOH . 
G 3 HOH A 21 1121 199 HOH HOH . 
G 3 HOH A 22 1122 2 HOH HOH . 
G 3 HOH A 23 1123 212 HOH HOH . 
G 3 HOH A 24 1124 6 HOH HOH . 
G 3 HOH A 25 1125 39 HOH HOH . 
G 3 HOH A 26 1126 133 HOH HOH . 
G 3 HOH A 27 1127 27 HOH HOH . 
G 3 HOH A 28 1128 148 HOH HOH . 
G 3 HOH A 29 1129 11 HOH HOH . 
G 3 HOH A 30 1130 174 HOH HOH . 
G 3 HOH A 31 1131 14 HOH HOH . 
G 3 HOH A 32 1132 196 HOH HOH . 
G 3 HOH A 33 1133 29 HOH HOH . 
G 3 HOH A 34 1134 205 HOH HOH . 
G 3 HOH A 35 1135 5 HOH HOH . 
G 3 HOH A 36 1136 28 HOH HOH . 
G 3 HOH A 37 1137 24 HOH HOH . 
G 3 HOH A 38 1138 73 HOH HOH . 
G 3 HOH A 39 1139 68 HOH HOH . 
G 3 HOH A 40 1140 62 HOH HOH . 
G 3 HOH A 41 1141 33 HOH HOH . 
G 3 HOH A 42 1142 105 HOH HOH . 
G 3 HOH A 43 1143 55 HOH HOH . 
G 3 HOH A 44 1144 34 HOH HOH . 
G 3 HOH A 45 1145 157 HOH HOH . 
G 3 HOH A 46 1146 75 HOH HOH . 
G 3 HOH A 47 1147 92 HOH HOH . 
G 3 HOH A 48 1148 179 HOH HOH . 
G 3 HOH A 49 1149 118 HOH HOH . 
G 3 HOH A 50 1150 197 HOH HOH . 
G 3 HOH A 51 1151 107 HOH HOH . 
G 3 HOH A 52 1152 20 HOH HOH . 
G 3 HOH A 53 1153 101 HOH HOH . 
G 3 HOH A 54 1154 58 HOH HOH . 
G 3 HOH A 55 1155 111 HOH HOH . 
G 3 HOH A 56 1156 41 HOH HOH . 
G 3 HOH A 57 1157 25 HOH HOH . 
G 3 HOH A 58 1158 10 HOH HOH . 
G 3 HOH A 59 1159 160 HOH HOH . 
G 3 HOH A 60 1160 219 HOH HOH . 
G 3 HOH A 61 1161 103 HOH HOH . 
G 3 HOH A 62 1162 13 HOH HOH . 
G 3 HOH A 63 1163 12 HOH HOH . 
G 3 HOH A 64 1164 129 HOH HOH . 
G 3 HOH A 65 1165 23 HOH HOH . 
G 3 HOH A 66 1166 53 HOH HOH . 
G 3 HOH A 67 1167 9 HOH HOH . 
G 3 HOH A 68 1168 72 HOH HOH . 
G 3 HOH A 69 1169 37 HOH HOH . 
G 3 HOH A 70 1170 70 HOH HOH . 
G 3 HOH A 71 1171 144 HOH HOH . 
G 3 HOH A 72 1172 191 HOH HOH . 
G 3 HOH A 73 1173 207 HOH HOH . 
G 3 HOH A 74 1174 91 HOH HOH . 
G 3 HOH A 75 1175 102 HOH HOH . 
G 3 HOH A 76 1176 71 HOH HOH . 
G 3 HOH A 77 1177 93 HOH HOH . 
G 3 HOH A 78 1178 35 HOH HOH . 
G 3 HOH A 79 1179 213 HOH HOH . 
G 3 HOH A 80 1180 21 HOH HOH . 
G 3 HOH A 81 1181 97 HOH HOH . 
G 3 HOH A 82 1182 74 HOH HOH . 
G 3 HOH A 83 1183 204 HOH HOH . 
G 3 HOH A 84 1184 202 HOH HOH . 
G 3 HOH A 85 1185 51 HOH HOH . 
G 3 HOH A 86 1186 137 HOH HOH . 
G 3 HOH A 87 1187 18 HOH HOH . 
G 3 HOH A 88 1188 153 HOH HOH . 
G 3 HOH A 89 1189 198 HOH HOH . 
G 3 HOH A 90 1190 66 HOH HOH . 
G 3 HOH A 91 1191 30 HOH HOH . 
G 3 HOH A 92 1192 172 HOH HOH . 
G 3 HOH A 93 1193 59 HOH HOH . 
G 3 HOH A 94 1194 50 HOH HOH . 
G 3 HOH A 95 1195 78 HOH HOH . 
G 3 HOH A 96 1196 203 HOH HOH . 
G 3 HOH A 97 1197 195 HOH HOH . 
G 3 HOH A 98 1198 43 HOH HOH . 
G 3 HOH A 99 1199 151 HOH HOH . 
G 3 HOH A 100 1200 201 HOH HOH . 
G 3 HOH A 101 1201 145 HOH HOH . 
G 3 HOH A 102 1202 38 HOH HOH . 
G 3 HOH A 103 1203 109 HOH HOH . 
G 3 HOH A 104 1204 4 HOH HOH . 
G 3 HOH A 105 1205 7 HOH HOH . 
G 3 HOH A 106 1206 126 HOH HOH . 
G 3 HOH A 107 1207 22 HOH HOH . 
G 3 HOH A 108 1208 52 HOH HOH . 
G 3 HOH A 109 1209 47 HOH HOH . 
G 3 HOH A 110 1210 15 HOH HOH . 
G 3 HOH A 111 1211 61 HOH HOH . 
G 3 HOH A 112 1212 77 HOH HOH . 
G 3 HOH A 113 1213 80 HOH HOH . 
G 3 HOH A 114 1214 32 HOH HOH . 
G 3 HOH A 115 1215 56 HOH HOH . 
G 3 HOH A 116 1216 26 HOH HOH . 
G 3 HOH A 117 1217 84 HOH HOH . 
G 3 HOH A 118 1218 88 HOH HOH . 
G 3 HOH A 119 1219 94 HOH HOH . 
G 3 HOH A 120 1220 16 HOH HOH . 
G 3 HOH A 121 1221 220 HOH HOH . 
G 3 HOH A 122 1222 69 HOH HOH . 
G 3 HOH A 123 1223 155 HOH HOH . 
G 3 HOH A 124 1224 184 HOH HOH . 
G 3 HOH A 125 1225 19 HOH HOH . 
G 3 HOH A 126 1226 183 HOH HOH . 
G 3 HOH A 127 1227 98 HOH HOH . 
G 3 HOH A 128 1228 130 HOH HOH . 
G 3 HOH A 129 1229 83 HOH HOH . 
G 3 HOH A 130 1230 79 HOH HOH . 
G 3 HOH A 131 1231 181 HOH HOH . 
G 3 HOH A 132 1232 226 HOH HOH . 
G 3 HOH A 133 1233 193 HOH HOH . 
G 3 HOH A 134 1234 117 HOH HOH . 
G 3 HOH A 135 1235 146 HOH HOH . 
G 3 HOH A 136 1236 108 HOH HOH . 
G 3 HOH A 137 1237 49 HOH HOH . 
G 3 HOH A 138 1238 152 HOH HOH . 
G 3 HOH A 139 1239 177 HOH HOH . 
G 3 HOH A 140 1240 221 HOH HOH . 
G 3 HOH A 141 1241 150 HOH HOH . 
G 3 HOH A 142 1242 218 HOH HOH . 
G 3 HOH A 143 1243 106 HOH HOH . 
G 3 HOH A 144 1244 113 HOH HOH . 
G 3 HOH A 145 1245 17 HOH HOH . 
G 3 HOH A 146 1246 192 HOH HOH . 
G 3 HOH A 147 1247 125 HOH HOH . 
G 3 HOH A 148 1248 138 HOH HOH . 
G 3 HOH A 149 1249 60 HOH HOH . 
G 3 HOH A 150 1250 82 HOH HOH . 
G 3 HOH A 151 1251 95 HOH HOH . 
G 3 HOH A 152 1252 76 HOH HOH . 
G 3 HOH A 153 1253 45 HOH HOH . 
G 3 HOH A 154 1254 211 HOH HOH . 
G 3 HOH A 155 1255 162 HOH HOH . 
G 3 HOH A 156 1256 86 HOH HOH . 
G 3 HOH A 157 1257 194 HOH HOH . 
G 3 HOH A 158 1258 185 HOH HOH . 
G 3 HOH A 159 1259 46 HOH HOH . 
G 3 HOH A 160 1260 90 HOH HOH . 
G 3 HOH A 161 1261 132 HOH HOH . 
G 3 HOH A 162 1262 42 HOH HOH . 
G 3 HOH A 163 1263 36 HOH HOH . 
G 3 HOH A 164 1264 223 HOH HOH . 
G 3 HOH A 165 1265 112 HOH HOH . 
G 3 HOH A 166 1266 96 HOH HOH . 
G 3 HOH A 167 1267 63 HOH HOH . 
G 3 HOH A 168 1268 128 HOH HOH . 
G 3 HOH A 169 1269 159 HOH HOH . 
G 3 HOH A 170 1270 119 HOH HOH . 
G 3 HOH A 171 1271 116 HOH HOH . 
G 3 HOH A 172 1272 224 HOH HOH . 
G 3 HOH A 173 1273 206 HOH HOH . 
G 3 HOH A 174 1274 40 HOH HOH . 
G 3 HOH A 175 1275 44 HOH HOH . 
G 3 HOH A 176 1276 3 HOH HOH . 
G 3 HOH A 177 1277 67 HOH HOH . 
G 3 HOH A 178 1278 225 HOH HOH . 
G 3 HOH A 179 1279 120 HOH HOH . 
G 3 HOH A 180 1280 65 HOH HOH . 
G 3 HOH A 181 1281 189 HOH HOH . 
G 3 HOH A 182 1282 54 HOH HOH . 
G 3 HOH A 183 1283 114 HOH HOH . 
G 3 HOH A 184 1284 166 HOH HOH . 
G 3 HOH A 185 1285 163 HOH HOH . 
G 3 HOH A 186 1286 217 HOH HOH . 
G 3 HOH A 187 1287 222 HOH HOH . 
G 3 HOH A 188 1288 140 HOH HOH . 
G 3 HOH A 189 1289 190 HOH HOH . 
G 3 HOH A 190 1290 186 HOH HOH . 
G 3 HOH A 191 1291 124 HOH HOH . 
G 3 HOH A 192 1292 170 HOH HOH . 
G 3 HOH A 193 1293 122 HOH HOH . 
G 3 HOH A 194 1294 180 HOH HOH . 
G 3 HOH A 195 1295 188 HOH HOH . 
G 3 HOH A 196 1296 161 HOH HOH . 
G 3 HOH A 197 1297 168 HOH HOH . 
G 3 HOH A 198 1298 131 HOH HOH . 
G 3 HOH A 199 1299 158 HOH HOH . 
G 3 HOH A 200 1300 178 HOH HOH . 
G 3 HOH A 201 1301 127 HOH HOH . 
G 3 HOH A 202 1302 123 HOH HOH . 
G 3 HOH A 203 1303 215 HOH HOH . 
G 3 HOH A 204 1304 176 HOH HOH . 
G 3 HOH A 205 1305 210 HOH HOH . 
G 3 HOH A 206 1306 214 HOH HOH . 
G 3 HOH A 207 1307 216 HOH HOH . 
G 3 HOH A 208 1308 85 HOH HOH . 
G 3 HOH A 209 1309 149 HOH HOH . 
G 3 HOH A 210 1310 81 HOH HOH . 
G 3 HOH A 211 1311 147 HOH HOH . 
G 3 HOH A 212 1312 164 HOH HOH . 
G 3 HOH A 213 1313 139 HOH HOH . 
G 3 HOH A 214 1314 99 HOH HOH . 
G 3 HOH A 215 1315 143 HOH HOH . 
G 3 HOH A 216 1316 141 HOH HOH . 
G 3 HOH A 217 1317 142 HOH HOH . 
G 3 HOH A 218 1318 115 HOH HOH . 
G 3 HOH A 219 1319 169 HOH HOH . 
G 3 HOH A 220 1320 167 HOH HOH . 
G 3 HOH A 221 1321 208 HOH HOH . 
G 3 HOH A 222 1322 175 HOH HOH . 
G 3 HOH A 223 1323 154 HOH HOH . 
G 3 HOH A 224 1324 209 HOH HOH . 
G 3 HOH A 225 1325 173 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . B 2 30.072 6.194 54.53 1 43.49 ? C1 EDO 1001 A 1 
HETATM 2 O O1 EDO . . . B 2 29.513 7.436 55.019 1 44.78 ? O1 EDO 1001 A 1 
HETATM 3 C C2 EDO . . . B 2 29.049 5.476 53.657 1 37.73 ? C2 EDO 1001 A 1 
HETATM 4 O O2 EDO . . . B 2 28.708 6.308 52.541 1 41.49 ? O2 EDO 1001 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           285 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#