data_6PET # _model_server_result.job_id xpg4xNI1znWfxtfozjnuNQ _model_server_result.datetime_utc '2024-11-05 05:45:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6pet # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 6PET # _exptl.entry_id 6PET _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.273 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S)-3-(3-hydroxyphenyl)-2-(4-iodophenyl)-4-methyl-2H-1-benzopyran-6-ol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 77.57 _cell.angle_beta 74.4 _cell.angle_gamma 63.09 _cell.entry_id 6PET _cell.length_a 53.173 _cell.length_b 58.746 _cell.length_c 92.934 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PET _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,K,L 1 1 C,D,H,I,J,M,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N # _chem_comp.formula 'C22 H17 I O3' _chem_comp.formula_weight 456.273 _chem_comp.id G9J _chem_comp.mon_nstd_flag . _chem_comp.name (2S)-3-(3-hydroxyphenyl)-2-(4-iodophenyl)-4-methyl-2H-1-benzopyran-6-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag I19 C16 G9J sing 92 n n C16 C15 G9J doub 93 n y C16 C17 G9J sing 94 n y C15 C14 G9J sing 95 n y C17 C18 G9J doub 96 n y C14 C13 G9J doub 97 n y C18 C13 G9J sing 98 n y C13 C4 G9J sing 99 n n C22 C21 G9J doub 100 n y C22 C23 G9J sing 101 n y C21 C20 G9J sing 102 n y C4 O5 G9J sing 103 n n C4 C3 G9J sing 104 n n C23 C24 G9J doub 105 n y O5 C6 G9J sing 106 n n C20 C3 G9J sing 107 n n C20 C25 G9J doub 108 n y C3 C2 G9J doub 109 n n C6 C11 G9J doub 110 n y C6 C7 G9J sing 111 n y C11 C10 G9J sing 112 n y C2 C7 G9J sing 113 n n C2 C1 G9J sing 114 n n C7 C8 G9J doub 115 n y C10 C9 G9J doub 116 n y C24 C25 G9J sing 117 n y C24 O26 G9J sing 118 n n C8 C9 G9J sing 119 n y C9 O12 G9J sing 120 n n C1 H1 G9J sing 121 n n C1 H2 G9J sing 122 n n C1 H3 G9J sing 123 n n C4 H4 G9J sing 124 n n C8 H5 G9J sing 125 n n C10 H6 G9J sing 126 n n C11 H7 G9J sing 127 n n O12 H8 G9J sing 128 n n C14 H9 G9J sing 129 n n C15 H10 G9J sing 130 n n C17 H11 G9J sing 131 n n C18 H12 G9J sing 132 n n C21 H13 G9J sing 133 n n C22 H14 G9J sing 134 n n C23 H15 G9J sing 135 n n C25 H16 G9J sing 136 n n O26 H17 G9J sing 137 n n # _atom_sites.entry_id 6PET _atom_sites.fract_transf_matrix[1][1] 0.018807 _atom_sites.fract_transf_matrix[1][2] -0.009544 _atom_sites.fract_transf_matrix[1][3] -0.004235 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019089 _atom_sites.fract_transf_matrix[2][3] -0.002091 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011238 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 G9J D 1 601 1 G9J RRG . F 3 ODY A 1 601 2 ODY DRG . G 4 CL A 1 602 1 CL CL . H 2 G9J C 1 601 2 G9J RRG . I 3 ODY B 1 601 1 ODY DRG . J 5 DMS B 1 602 1 DMS DMS . K 6 HOH D 1 701 120 HOH HOH . K 6 HOH D 2 702 95 HOH HOH . K 6 HOH D 3 703 20 HOH HOH . K 6 HOH D 4 704 9 HOH HOH . K 6 HOH D 5 705 226 HOH HOH . K 6 HOH D 6 706 117 HOH HOH . K 6 HOH D 7 707 227 HOH HOH . K 6 HOH D 8 708 43 HOH HOH . K 6 HOH D 9 709 50 HOH HOH . K 6 HOH D 10 710 225 HOH HOH . K 6 HOH D 11 711 7 HOH HOH . K 6 HOH D 12 712 36 HOH HOH . K 6 HOH D 13 713 135 HOH HOH . K 6 HOH D 14 714 211 HOH HOH . K 6 HOH D 15 715 119 HOH HOH . K 6 HOH D 16 716 125 HOH HOH . K 6 HOH D 17 717 47 HOH HOH . K 6 HOH D 18 718 116 HOH HOH . K 6 HOH D 19 719 1 HOH HOH . K 6 HOH D 20 720 16 HOH HOH . K 6 HOH D 21 721 3 HOH HOH . K 6 HOH D 22 722 85 HOH HOH . K 6 HOH D 23 723 71 HOH HOH . L 6 HOH A 1 701 224 HOH HOH . L 6 HOH A 2 702 165 HOH HOH . L 6 HOH A 3 703 112 HOH HOH . L 6 HOH A 4 704 94 HOH HOH . L 6 HOH A 5 705 92 HOH HOH . L 6 HOH A 6 706 123 HOH HOH . L 6 HOH A 7 707 84 HOH HOH . L 6 HOH A 8 708 96 HOH HOH . L 6 HOH A 9 709 93 HOH HOH . L 6 HOH A 10 710 163 HOH HOH . L 6 HOH A 11 711 223 HOH HOH . L 6 HOH A 12 712 128 HOH HOH . L 6 HOH A 13 713 143 HOH HOH . L 6 HOH A 14 714 12 HOH HOH . L 6 HOH A 15 715 201 HOH HOH . L 6 HOH A 16 716 19 HOH HOH . L 6 HOH A 17 717 10 HOH HOH . L 6 HOH A 18 718 140 HOH HOH . L 6 HOH A 19 719 52 HOH HOH . L 6 HOH A 20 720 213 HOH HOH . L 6 HOH A 21 721 77 HOH HOH . L 6 HOH A 22 722 216 HOH HOH . L 6 HOH A 23 723 222 HOH HOH . M 6 HOH C 1 701 113 HOH HOH . M 6 HOH C 2 702 105 HOH HOH . M 6 HOH C 3 703 115 HOH HOH . M 6 HOH C 4 704 132 HOH HOH . M 6 HOH C 5 705 82 HOH HOH . M 6 HOH C 6 706 145 HOH HOH . M 6 HOH C 7 707 91 HOH HOH . M 6 HOH C 8 708 99 HOH HOH . M 6 HOH C 9 709 124 HOH HOH . M 6 HOH C 10 710 148 HOH HOH . M 6 HOH C 11 711 41 HOH HOH . M 6 HOH C 12 712 98 HOH HOH . M 6 HOH C 13 713 114 HOH HOH . M 6 HOH C 14 714 90 HOH HOH . M 6 HOH C 15 715 102 HOH HOH . M 6 HOH C 16 716 139 HOH HOH . M 6 HOH C 17 717 127 HOH HOH . M 6 HOH C 18 718 6 HOH HOH . M 6 HOH C 19 719 168 HOH HOH . M 6 HOH C 20 720 221 HOH HOH . M 6 HOH C 21 721 35 HOH HOH . M 6 HOH C 22 722 220 HOH HOH . M 6 HOH C 23 723 34 HOH HOH . N 6 HOH B 1 701 17 HOH HOH . N 6 HOH B 2 702 39 HOH HOH . N 6 HOH B 3 703 89 HOH HOH . N 6 HOH B 4 704 87 HOH HOH . N 6 HOH B 5 705 104 HOH HOH . N 6 HOH B 6 706 118 HOH HOH . N 6 HOH B 7 707 83 HOH HOH . N 6 HOH B 8 708 217 HOH HOH . N 6 HOH B 9 709 101 HOH HOH . N 6 HOH B 10 710 86 HOH HOH . N 6 HOH B 11 711 29 HOH HOH . N 6 HOH B 12 712 60 HOH HOH . N 6 HOH B 13 713 142 HOH HOH . N 6 HOH B 14 714 48 HOH HOH . N 6 HOH B 15 715 18 HOH HOH . N 6 HOH B 16 716 88 HOH HOH . N 6 HOH B 17 717 122 HOH HOH . N 6 HOH B 18 718 5 HOH HOH . N 6 HOH B 19 719 57 HOH HOH . N 6 HOH B 20 720 130 HOH HOH . N 6 HOH B 21 721 218 HOH HOH . N 6 HOH B 22 722 219 HOH HOH . N 6 HOH B 23 723 54 HOH HOH . N 6 HOH B 24 724 100 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 G9J . . . E 2 53.812 12.764 56.281 1 42.46 ? C1 G9J 601 D 1 HETATM 2 C C2 G9J . . . E 2 53.843 13.987 57.164 1 52.96 ? C2 G9J 601 D 1 HETATM 3 C C3 G9J . . . E 2 54.914 14.295 57.931 1 56.94 ? C3 G9J 601 D 1 HETATM 4 C C4 G9J . . . E 2 54.922 15.55 58.761 1 54.38 ? C4 G9J 601 D 1 HETATM 5 O O5 G9J . . . E 2 54.022 16.54 58.255 1 56.32 ? O5 G9J 601 D 1 HETATM 6 C C6 G9J . . . E 2 52.822 16.179 57.739 1 52.88 ? C6 G9J 601 D 1 HETATM 7 C C7 G9J . . . E 2 52.677 14.896 57.185 1 49.97 ? C7 G9J 601 D 1 HETATM 8 C C8 G9J . . . E 2 51.459 14.536 56.619 1 49.44 ? C8 G9J 601 D 1 HETATM 9 C C9 G9J . . . E 2 50.398 15.442 56.639 1 50.7 ? C9 G9J 601 D 1 HETATM 10 C C10 G9J . . . E 2 50.547 16.704 57.196 1 46.52 ? C10 G9J 601 D 1 HETATM 11 C C11 G9J . . . E 2 51.762 17.074 57.744 1 46.6 ? C11 G9J 601 D 1 HETATM 12 O O12 G9J . . . E 2 49.197 15.089 56.106 1 58.6 ? O12 G9J 601 D 1 HETATM 13 C C13 G9J . . . E 2 54.528 15.386 60.199 1 45.9 ? C13 G9J 601 D 1 HETATM 14 C C14 G9J . . . E 2 55.127 16.227 61.126 1 44.19 ? C14 G9J 601 D 1 HETATM 15 C C15 G9J . . . E 2 54.779 16.139 62.455 1 47.86 ? C15 G9J 601 D 1 HETATM 16 C C16 G9J . . . E 2 53.821 15.211 62.862 1 56.06 ? C16 G9J 601 D 1 HETATM 17 C C17 G9J . . . E 2 53.212 14.379 61.923 1 50.84 ? C17 G9J 601 D 1 HETATM 18 C C18 G9J . . . E 2 53.569 14.471 60.584 1 49.66 ? C18 G9J 601 D 1 HETATM 19 I I19 G9J . . . E 2 53.299 15.095 64.9 1 73.22 ? I19 G9J 601 D 1 HETATM 20 C C20 G9J . . . E 2 56.178 13.542 57.963 1 60.5 ? C20 G9J 601 D 1 HETATM 21 C C21 G9J . . . E 2 56.811 13.2 56.759 1 63.77 ? C21 G9J 601 D 1 HETATM 22 C C22 G9J . . . E 2 58.02 12.538 56.77 1 65.27 ? C22 G9J 601 D 1 HETATM 23 C C23 G9J . . . E 2 58.624 12.241 57.982 1 63.46 ? C23 G9J 601 D 1 HETATM 24 C C24 G9J . . . E 2 58.015 12.603 59.174 1 53.98 ? C24 G9J 601 D 1 HETATM 25 C C25 G9J . . . E 2 56.799 13.26 59.18 1 55.02 ? C25 G9J 601 D 1 HETATM 26 O O26 G9J . . . E 2 58.627 12.303 60.344 1 54.22 ? O26 G9J 601 D 1 # _model_server_stats.io_time_ms 34 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 61 _model_server_stats.query_time_ms 361 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 26 #