data_6PET # _model_server_result.job_id OOT3BU4ikdxjlCRFhzE8sQ _model_server_result.datetime_utc '2024-11-05 05:40:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6pet # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 6PET # _exptl.entry_id 6PET _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 461.525 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S)-2-(4-{2-[3-(fluoromethyl)azetidin-1-yl]ethoxy}phenyl)-3-(3-hydroxyphenyl)-4-methyl-2H-1-benzopyran-8-ol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 77.57 _cell.angle_beta 74.4 _cell.angle_gamma 63.09 _cell.entry_id 6PET _cell.length_a 53.173 _cell.length_b 58.746 _cell.length_c 92.934 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PET _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,K,L 1 1 C,D,H,I,J,M,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 I N N # _chem_comp.formula 'C28 H28 F N O4' _chem_comp.formula_weight 461.525 _chem_comp.id ODY _chem_comp.mon_nstd_flag . _chem_comp.name (2S)-2-(4-{2-[3-(fluoromethyl)azetidin-1-yl]ethoxy}phenyl)-3-(3-hydroxyphenyl)-4-methyl-2H-1-benzopyran-8-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C26 C25 ODY sing 292 n n C26 N23 ODY sing 293 n n C27 C25 ODY sing 294 n n C27 F28 ODY sing 295 n n C25 C24 ODY sing 296 n n N23 C22 ODY sing 297 n n N23 C24 ODY sing 298 n n C22 C21 ODY sing 299 n n O20 C21 ODY sing 300 n n O20 C17 ODY sing 301 n n C10 C11 ODY doub 302 n y C10 C9 ODY sing 303 n y C16 C17 ODY doub 304 n y C16 C15 ODY sing 305 n y C11 C12 ODY sing 306 n y C9 C8 ODY doub 307 n y C17 C18 ODY sing 308 n y C15 C14 ODY doub 309 n y C12 O13 ODY sing 310 n n C12 C7 ODY doub 311 n y C8 C7 ODY sing 312 n y C8 C2 ODY sing 313 n n C1 C2 ODY sing 314 n n C7 O6 ODY sing 315 n n C2 C3 ODY doub 316 n n C18 C19 ODY doub 317 n y C14 C19 ODY sing 318 n y C14 C4 ODY sing 319 n n C30 C31 ODY doub 320 n y C30 C29 ODY sing 321 n y C3 C4 ODY sing 322 n n C3 C29 ODY sing 323 n n O6 C4 ODY sing 324 n n C31 C32 ODY sing 325 n y C29 C34 ODY doub 326 n y C32 C33 ODY doub 327 n y C34 C33 ODY sing 328 n y C33 O35 ODY sing 329 n n C4 H5 ODY sing 330 n n C11 H41 ODY sing 331 n n C9 H39 ODY sing 332 n n C10 H40 ODY sing 333 n n C1 H38 ODY sing 334 n n C1 H37 ODY sing 335 n n C1 H36 ODY sing 336 n n O13 H42 ODY sing 337 n n C15 H43 ODY sing 338 n n C16 H44 ODY sing 339 n n C18 H45 ODY sing 340 n n C19 H46 ODY sing 341 n n C21 H48 ODY sing 342 n n C21 H47 ODY sing 343 n n C22 H50 ODY sing 344 n n C22 H49 ODY sing 345 n n C24 H51 ODY sing 346 n n C24 H52 ODY sing 347 n n C25 H53 ODY sing 348 n n C26 H55 ODY sing 349 n n C26 H54 ODY sing 350 n n C27 H57 ODY sing 351 n n C27 H56 ODY sing 352 n n C30 H58 ODY sing 353 n n C31 H59 ODY sing 354 n n C32 H60 ODY sing 355 n n C34 H61 ODY sing 356 n n O35 H62 ODY sing 357 n n # _atom_sites.entry_id 6PET _atom_sites.fract_transf_matrix[1][1] 0.018807 _atom_sites.fract_transf_matrix[1][2] -0.009544 _atom_sites.fract_transf_matrix[1][3] -0.004235 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019089 _atom_sites.fract_transf_matrix[2][3] -0.002091 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011238 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 G9J D 1 601 1 G9J RRG . F 3 ODY A 1 601 2 ODY DRG . G 4 CL A 1 602 1 CL CL . H 2 G9J C 1 601 2 G9J RRG . I 3 ODY B 1 601 1 ODY DRG . J 5 DMS B 1 602 1 DMS DMS . K 6 HOH D 1 701 120 HOH HOH . K 6 HOH D 2 702 95 HOH HOH . K 6 HOH D 3 703 20 HOH HOH . K 6 HOH D 4 704 9 HOH HOH . K 6 HOH D 5 705 226 HOH HOH . K 6 HOH D 6 706 117 HOH HOH . K 6 HOH D 7 707 227 HOH HOH . K 6 HOH D 8 708 43 HOH HOH . K 6 HOH D 9 709 50 HOH HOH . K 6 HOH D 10 710 225 HOH HOH . K 6 HOH D 11 711 7 HOH HOH . K 6 HOH D 12 712 36 HOH HOH . K 6 HOH D 13 713 135 HOH HOH . K 6 HOH D 14 714 211 HOH HOH . K 6 HOH D 15 715 119 HOH HOH . K 6 HOH D 16 716 125 HOH HOH . K 6 HOH D 17 717 47 HOH HOH . K 6 HOH D 18 718 116 HOH HOH . K 6 HOH D 19 719 1 HOH HOH . K 6 HOH D 20 720 16 HOH HOH . K 6 HOH D 21 721 3 HOH HOH . K 6 HOH D 22 722 85 HOH HOH . K 6 HOH D 23 723 71 HOH HOH . L 6 HOH A 1 701 224 HOH HOH . L 6 HOH A 2 702 165 HOH HOH . L 6 HOH A 3 703 112 HOH HOH . L 6 HOH A 4 704 94 HOH HOH . L 6 HOH A 5 705 92 HOH HOH . L 6 HOH A 6 706 123 HOH HOH . L 6 HOH A 7 707 84 HOH HOH . L 6 HOH A 8 708 96 HOH HOH . L 6 HOH A 9 709 93 HOH HOH . L 6 HOH A 10 710 163 HOH HOH . L 6 HOH A 11 711 223 HOH HOH . L 6 HOH A 12 712 128 HOH HOH . L 6 HOH A 13 713 143 HOH HOH . L 6 HOH A 14 714 12 HOH HOH . L 6 HOH A 15 715 201 HOH HOH . L 6 HOH A 16 716 19 HOH HOH . L 6 HOH A 17 717 10 HOH HOH . L 6 HOH A 18 718 140 HOH HOH . L 6 HOH A 19 719 52 HOH HOH . L 6 HOH A 20 720 213 HOH HOH . L 6 HOH A 21 721 77 HOH HOH . L 6 HOH A 22 722 216 HOH HOH . L 6 HOH A 23 723 222 HOH HOH . M 6 HOH C 1 701 113 HOH HOH . M 6 HOH C 2 702 105 HOH HOH . M 6 HOH C 3 703 115 HOH HOH . M 6 HOH C 4 704 132 HOH HOH . M 6 HOH C 5 705 82 HOH HOH . M 6 HOH C 6 706 145 HOH HOH . M 6 HOH C 7 707 91 HOH HOH . M 6 HOH C 8 708 99 HOH HOH . M 6 HOH C 9 709 124 HOH HOH . M 6 HOH C 10 710 148 HOH HOH . M 6 HOH C 11 711 41 HOH HOH . M 6 HOH C 12 712 98 HOH HOH . M 6 HOH C 13 713 114 HOH HOH . M 6 HOH C 14 714 90 HOH HOH . M 6 HOH C 15 715 102 HOH HOH . M 6 HOH C 16 716 139 HOH HOH . M 6 HOH C 17 717 127 HOH HOH . M 6 HOH C 18 718 6 HOH HOH . M 6 HOH C 19 719 168 HOH HOH . M 6 HOH C 20 720 221 HOH HOH . M 6 HOH C 21 721 35 HOH HOH . M 6 HOH C 22 722 220 HOH HOH . M 6 HOH C 23 723 34 HOH HOH . N 6 HOH B 1 701 17 HOH HOH . N 6 HOH B 2 702 39 HOH HOH . N 6 HOH B 3 703 89 HOH HOH . N 6 HOH B 4 704 87 HOH HOH . N 6 HOH B 5 705 104 HOH HOH . N 6 HOH B 6 706 118 HOH HOH . N 6 HOH B 7 707 83 HOH HOH . N 6 HOH B 8 708 217 HOH HOH . N 6 HOH B 9 709 101 HOH HOH . N 6 HOH B 10 710 86 HOH HOH . N 6 HOH B 11 711 29 HOH HOH . N 6 HOH B 12 712 60 HOH HOH . N 6 HOH B 13 713 142 HOH HOH . N 6 HOH B 14 714 48 HOH HOH . N 6 HOH B 15 715 18 HOH HOH . N 6 HOH B 16 716 88 HOH HOH . N 6 HOH B 17 717 122 HOH HOH . N 6 HOH B 18 718 5 HOH HOH . N 6 HOH B 19 719 57 HOH HOH . N 6 HOH B 20 720 130 HOH HOH . N 6 HOH B 21 721 218 HOH HOH . N 6 HOH B 22 722 219 HOH HOH . N 6 HOH B 23 723 54 HOH HOH . N 6 HOH B 24 724 100 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 ODY . . . F 3 63.791 -14.426 66.158 1 54.21 ? C4 ODY 601 A 1 HETATM 2 C C14 ODY . . . F 3 64.911 -13.82 65.338 1 48.52 ? C14 ODY 601 A 1 HETATM 3 C C11 ODY . . . F 3 62.631 -18.1 63.325 1 66.34 ? C11 ODY 601 A 1 HETATM 4 C C7 ODY . . . F 3 62.983 -16.349 64.93 1 71.3 ? C7 ODY 601 A 1 HETATM 5 C C8 ODY . . . F 3 61.828 -15.694 64.506 1 71.84 ? C8 ODY 601 A 1 HETATM 6 C C9 ODY . . . F 3 61.067 -16.283 63.494 1 71.44 ? C9 ODY 601 A 1 HETATM 7 C C10 ODY . . . F 3 61.47 -17.471 62.91 1 64.7 ? C10 ODY 601 A 1 HETATM 8 C C12 ODY . . . F 3 63.396 -17.547 64.348 1 74.12 ? C12 ODY 601 A 1 HETATM 9 C C3 ODY . . . F 3 62.466 -13.772 65.839 1 65.69 ? C3 ODY 601 A 1 HETATM 10 C C1 ODY . . . F 3 60.199 -13.753 64.803 1 78.49 ? C1 ODY 601 A 1 HETATM 11 C C2 ODY . . . F 3 61.527 -14.394 65.095 1 73.94 ? C2 ODY 601 A 1 HETATM 12 O O6 ODY . . . F 3 63.765 -15.862 65.945 1 65.83 ? O6 ODY 601 A 1 HETATM 13 O O13 ODY . . . F 3 64.521 -18.176 64.783 1 80.62 ? O13 ODY 601 A 1 HETATM 14 C C15 ODY . . . F 3 64.694 -13.45 64.025 1 49.54 ? C15 ODY 601 A 1 HETATM 15 C C16 ODY . . . F 3 65.715 -12.94 63.241 1 48.25 ? C16 ODY 601 A 1 HETATM 16 C C17 ODY . . . F 3 66.982 -12.797 63.78 1 46.4 ? C17 ODY 601 A 1 HETATM 17 C C18 ODY . . . F 3 67.221 -13.148 65.096 1 45.8 ? C18 ODY 601 A 1 HETATM 18 C C19 ODY . . . F 3 66.183 -13.657 65.867 1 48.45 ? C19 ODY 601 A 1 HETATM 19 O O20 ODY . . . F 3 67.895 -12.336 62.86 1 49.73 ? O20 ODY 601 A 1 HETATM 20 C C21 ODY . . . F 3 69.238 -12.123 63.279 1 46.68 ? C21 ODY 601 A 1 HETATM 21 C C22 ODY . . . F 3 69.97 -11.656 62.062 1 57.06 ? C22 ODY 601 A 1 HETATM 22 N N23 ODY . . . F 3 70.902 -12.677 61.574 1 72.81 ? N23 ODY 601 A 1 HETATM 23 C C24 ODY . . . F 3 72.179 -12.738 62.343 1 79.76 ? C24 ODY 601 A 1 HETATM 24 C C25 ODY . . . F 3 72.987 -12.604 61.02 1 169.42 ? C25 ODY 601 A 1 HETATM 25 C C26 ODY . . . F 3 71.619 -12.38 60.3 1 77.06 ? C26 ODY 601 A 1 HETATM 26 C C27 ODY . . . F 3 73.951 -11.4 61.003 1 168.75 ? C27 ODY 601 A 1 HETATM 27 F F28 ODY . . . F 3 74.748 -11.381 62.153 1 167.86 ? F28 ODY 601 A 1 HETATM 28 C C29 ODY . . . F 3 62.353 -12.39 66.358 1 71.17 ? C29 ODY 601 A 1 HETATM 29 C C30 ODY . . . F 3 62.834 -11.315 65.619 1 78.53 ? C30 ODY 601 A 1 HETATM 30 C C31 ODY . . . F 3 62.806 -10.035 66.143 1 79.94 ? C31 ODY 601 A 1 HETATM 31 C C32 ODY . . . F 3 62.299 -9.811 67.411 1 75.38 ? C32 ODY 601 A 1 HETATM 32 C C33 ODY . . . F 3 61.813 -10.878 68.151 1 76.06 ? C33 ODY 601 A 1 HETATM 33 C C34 ODY . . . F 3 61.824 -12.165 67.627 1 72.85 ? C34 ODY 601 A 1 HETATM 34 O O35 ODY . . . F 3 61.361 -10.664 69.418 1 82.41 ? O35 ODY 601 A 1 HETATM 35 H H5 ODY . . . F 3 63.997 -14.389 67.226 1 65.05 ? H5 ODY 601 A 1 HETATM 36 H H41 ODY . . . F 3 62.958 -19.028 62.86 1 79.61 ? H41 ODY 601 A 1 HETATM 37 H H39 ODY . . . F 3 60.15 -15.795 63.168 1 85.72 ? H39 ODY 601 A 1 HETATM 38 H H40 ODY . . . F 3 60.875 -17.921 62.117 1 77.64 ? H40 ODY 601 A 1 HETATM 39 H H38 ODY . . . F 3 59.676 -14.247 63.985 1 94.19 ? H38 ODY 601 A 1 HETATM 40 H H37 ODY . . . F 3 60.339 -12.711 64.518 1 94.19 ? H37 ODY 601 A 1 HETATM 41 H H36 ODY . . . F 3 59.525 -13.757 65.659 1 94.19 ? H36 ODY 601 A 1 HETATM 42 H H42 ODY . . . F 3 64.935 -17.655 65.52 1 96.74 ? H42 ODY 601 A 1 HETATM 43 H H43 ODY . . . F 3 63.707 -13.551 63.575 1 59.45 ? H43 ODY 601 A 1 HETATM 44 H H44 ODY . . . F 3 65.52 -12.654 62.209 1 57.9 ? H44 ODY 601 A 1 HETATM 45 H H45 ODY . . . F 3 68.192 -13.051 65.578 1 54.96 ? H45 ODY 601 A 1 HETATM 46 H H46 ODY . . . F 3 66.381 -13.929 66.902 1 58.15 ? H46 ODY 601 A 1 HETATM 47 H H48 ODY . . . F 3 69.278 -11.356 64.051 1 56.02 ? H48 ODY 601 A 1 HETATM 48 H H47 ODY . . . F 3 69.675 -13.035 63.683 1 56.02 ? H47 ODY 601 A 1 HETATM 49 H H50 ODY . . . F 3 69.256 -11.314 61.315 1 68.47 ? H50 ODY 601 A 1 HETATM 50 H H49 ODY . . . F 3 70.567 -10.786 62.333 1 68.47 ? H49 ODY 601 A 1 HETATM 51 H H51 ODY . . . F 3 72.395 -11.964 63.078 1 95.71 ? H51 ODY 601 A 1 HETATM 52 H H52 ODY . . . F 3 72.277 -13.693 62.858 1 95.71 ? H52 ODY 601 A 1 HETATM 53 H H53 ODY . . . F 3 73.507 -13.508 60.708 1 203.31 ? H53 ODY 601 A 1 HETATM 54 H H55 ODY . . . F 3 71.439 -13.019 59.436 1 92.48 ? H55 ODY 601 A 1 HETATM 55 H H54 ODY . . . F 3 71.431 -11.361 59.963 1 92.48 ? H54 ODY 601 A 1 HETATM 56 H H57 ODY . . . F 3 73.393 -10.466 60.956 1 202.5 ? H57 ODY 601 A 1 HETATM 57 H H56 ODY . . . F 3 74.607 -11.417 60.135 1 202.5 ? H56 ODY 601 A 1 HETATM 58 H H58 ODY . . . F 3 63.233 -11.488 64.621 1 94.24 ? H58 ODY 601 A 1 HETATM 59 H H59 ODY . . . F 3 63.185 -9.197 65.558 1 95.93 ? H59 ODY 601 A 1 HETATM 60 H H60 ODY . . . F 3 62.278 -8.808 67.834 1 90.46 ? H60 ODY 601 A 1 HETATM 61 H H61 ODY . . . F 3 61.421 -12.996 68.204 1 87.42 ? H61 ODY 601 A 1 HETATM 62 H H62 ODY . . . F 3 61.325 -9.679 69.539 1 98.89 ? H62 ODY 601 A 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 62 #