data_6PET # _model_server_result.job_id eQ5yS0kF6JktRNcBhPkg3A _model_server_result.datetime_utc '2024-11-05 05:38:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6pet # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":601}' # _entry.id 6PET # _exptl.entry_id 6PET _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 461.525 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S)-2-(4-{2-[3-(fluoromethyl)azetidin-1-yl]ethoxy}phenyl)-3-(3-hydroxyphenyl)-4-methyl-2H-1-benzopyran-8-ol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 77.57 _cell.angle_beta 74.4 _cell.angle_gamma 63.09 _cell.entry_id 6PET _cell.length_a 53.173 _cell.length_b 58.746 _cell.length_c 92.934 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PET _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,K,L 1 1 C,D,H,I,J,M,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 I N N # _chem_comp.formula 'C28 H28 F N O4' _chem_comp.formula_weight 461.525 _chem_comp.id ODY _chem_comp.mon_nstd_flag . _chem_comp.name (2S)-2-(4-{2-[3-(fluoromethyl)azetidin-1-yl]ethoxy}phenyl)-3-(3-hydroxyphenyl)-4-methyl-2H-1-benzopyran-8-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C26 C25 ODY sing 292 n n C26 N23 ODY sing 293 n n C27 C25 ODY sing 294 n n C27 F28 ODY sing 295 n n C25 C24 ODY sing 296 n n N23 C22 ODY sing 297 n n N23 C24 ODY sing 298 n n C22 C21 ODY sing 299 n n O20 C21 ODY sing 300 n n O20 C17 ODY sing 301 n n C10 C11 ODY doub 302 n y C10 C9 ODY sing 303 n y C16 C17 ODY doub 304 n y C16 C15 ODY sing 305 n y C11 C12 ODY sing 306 n y C9 C8 ODY doub 307 n y C17 C18 ODY sing 308 n y C15 C14 ODY doub 309 n y C12 O13 ODY sing 310 n n C12 C7 ODY doub 311 n y C8 C7 ODY sing 312 n y C8 C2 ODY sing 313 n n C1 C2 ODY sing 314 n n C7 O6 ODY sing 315 n n C2 C3 ODY doub 316 n n C18 C19 ODY doub 317 n y C14 C19 ODY sing 318 n y C14 C4 ODY sing 319 n n C30 C31 ODY doub 320 n y C30 C29 ODY sing 321 n y C3 C4 ODY sing 322 n n C3 C29 ODY sing 323 n n O6 C4 ODY sing 324 n n C31 C32 ODY sing 325 n y C29 C34 ODY doub 326 n y C32 C33 ODY doub 327 n y C34 C33 ODY sing 328 n y C33 O35 ODY sing 329 n n C4 H5 ODY sing 330 n n C11 H41 ODY sing 331 n n C9 H39 ODY sing 332 n n C10 H40 ODY sing 333 n n C1 H38 ODY sing 334 n n C1 H37 ODY sing 335 n n C1 H36 ODY sing 336 n n O13 H42 ODY sing 337 n n C15 H43 ODY sing 338 n n C16 H44 ODY sing 339 n n C18 H45 ODY sing 340 n n C19 H46 ODY sing 341 n n C21 H48 ODY sing 342 n n C21 H47 ODY sing 343 n n C22 H50 ODY sing 344 n n C22 H49 ODY sing 345 n n C24 H51 ODY sing 346 n n C24 H52 ODY sing 347 n n C25 H53 ODY sing 348 n n C26 H55 ODY sing 349 n n C26 H54 ODY sing 350 n n C27 H57 ODY sing 351 n n C27 H56 ODY sing 352 n n C30 H58 ODY sing 353 n n C31 H59 ODY sing 354 n n C32 H60 ODY sing 355 n n C34 H61 ODY sing 356 n n O35 H62 ODY sing 357 n n # _atom_sites.entry_id 6PET _atom_sites.fract_transf_matrix[1][1] 0.018807 _atom_sites.fract_transf_matrix[1][2] -0.009544 _atom_sites.fract_transf_matrix[1][3] -0.004235 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019089 _atom_sites.fract_transf_matrix[2][3] -0.002091 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011238 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 G9J D 1 601 1 G9J RRG . F 3 ODY A 1 601 2 ODY DRG . G 4 CL A 1 602 1 CL CL . H 2 G9J C 1 601 2 G9J RRG . I 3 ODY B 1 601 1 ODY DRG . J 5 DMS B 1 602 1 DMS DMS . K 6 HOH D 1 701 120 HOH HOH . K 6 HOH D 2 702 95 HOH HOH . K 6 HOH D 3 703 20 HOH HOH . K 6 HOH D 4 704 9 HOH HOH . K 6 HOH D 5 705 226 HOH HOH . K 6 HOH D 6 706 117 HOH HOH . K 6 HOH D 7 707 227 HOH HOH . K 6 HOH D 8 708 43 HOH HOH . K 6 HOH D 9 709 50 HOH HOH . K 6 HOH D 10 710 225 HOH HOH . K 6 HOH D 11 711 7 HOH HOH . K 6 HOH D 12 712 36 HOH HOH . K 6 HOH D 13 713 135 HOH HOH . K 6 HOH D 14 714 211 HOH HOH . K 6 HOH D 15 715 119 HOH HOH . K 6 HOH D 16 716 125 HOH HOH . K 6 HOH D 17 717 47 HOH HOH . K 6 HOH D 18 718 116 HOH HOH . K 6 HOH D 19 719 1 HOH HOH . K 6 HOH D 20 720 16 HOH HOH . K 6 HOH D 21 721 3 HOH HOH . K 6 HOH D 22 722 85 HOH HOH . K 6 HOH D 23 723 71 HOH HOH . L 6 HOH A 1 701 224 HOH HOH . L 6 HOH A 2 702 165 HOH HOH . L 6 HOH A 3 703 112 HOH HOH . L 6 HOH A 4 704 94 HOH HOH . L 6 HOH A 5 705 92 HOH HOH . L 6 HOH A 6 706 123 HOH HOH . L 6 HOH A 7 707 84 HOH HOH . L 6 HOH A 8 708 96 HOH HOH . L 6 HOH A 9 709 93 HOH HOH . L 6 HOH A 10 710 163 HOH HOH . L 6 HOH A 11 711 223 HOH HOH . L 6 HOH A 12 712 128 HOH HOH . L 6 HOH A 13 713 143 HOH HOH . L 6 HOH A 14 714 12 HOH HOH . L 6 HOH A 15 715 201 HOH HOH . L 6 HOH A 16 716 19 HOH HOH . L 6 HOH A 17 717 10 HOH HOH . L 6 HOH A 18 718 140 HOH HOH . L 6 HOH A 19 719 52 HOH HOH . L 6 HOH A 20 720 213 HOH HOH . L 6 HOH A 21 721 77 HOH HOH . L 6 HOH A 22 722 216 HOH HOH . L 6 HOH A 23 723 222 HOH HOH . M 6 HOH C 1 701 113 HOH HOH . M 6 HOH C 2 702 105 HOH HOH . M 6 HOH C 3 703 115 HOH HOH . M 6 HOH C 4 704 132 HOH HOH . M 6 HOH C 5 705 82 HOH HOH . M 6 HOH C 6 706 145 HOH HOH . M 6 HOH C 7 707 91 HOH HOH . M 6 HOH C 8 708 99 HOH HOH . M 6 HOH C 9 709 124 HOH HOH . M 6 HOH C 10 710 148 HOH HOH . M 6 HOH C 11 711 41 HOH HOH . M 6 HOH C 12 712 98 HOH HOH . M 6 HOH C 13 713 114 HOH HOH . M 6 HOH C 14 714 90 HOH HOH . M 6 HOH C 15 715 102 HOH HOH . M 6 HOH C 16 716 139 HOH HOH . M 6 HOH C 17 717 127 HOH HOH . M 6 HOH C 18 718 6 HOH HOH . M 6 HOH C 19 719 168 HOH HOH . M 6 HOH C 20 720 221 HOH HOH . M 6 HOH C 21 721 35 HOH HOH . M 6 HOH C 22 722 220 HOH HOH . M 6 HOH C 23 723 34 HOH HOH . N 6 HOH B 1 701 17 HOH HOH . N 6 HOH B 2 702 39 HOH HOH . N 6 HOH B 3 703 89 HOH HOH . N 6 HOH B 4 704 87 HOH HOH . N 6 HOH B 5 705 104 HOH HOH . N 6 HOH B 6 706 118 HOH HOH . N 6 HOH B 7 707 83 HOH HOH . N 6 HOH B 8 708 217 HOH HOH . N 6 HOH B 9 709 101 HOH HOH . N 6 HOH B 10 710 86 HOH HOH . N 6 HOH B 11 711 29 HOH HOH . N 6 HOH B 12 712 60 HOH HOH . N 6 HOH B 13 713 142 HOH HOH . N 6 HOH B 14 714 48 HOH HOH . N 6 HOH B 15 715 18 HOH HOH . N 6 HOH B 16 716 88 HOH HOH . N 6 HOH B 17 717 122 HOH HOH . N 6 HOH B 18 718 5 HOH HOH . N 6 HOH B 19 719 57 HOH HOH . N 6 HOH B 20 720 130 HOH HOH . N 6 HOH B 21 721 218 HOH HOH . N 6 HOH B 22 722 219 HOH HOH . N 6 HOH B 23 723 54 HOH HOH . N 6 HOH B 24 724 100 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 ODY . . . I 3 64.967 26.957 88.211 1 47.93 ? C4 ODY 601 B 1 HETATM 2 C C14 ODY . . . I 3 66.095 26.375 89.031 1 42.26 ? C14 ODY 601 B 1 HETATM 3 C C11 ODY . . . I 3 63.66 30.663 90.946 1 61.2 ? C11 ODY 601 B 1 HETATM 4 C C7 ODY . . . I 3 64.097 28.89 89.388 1 64.31 ? C7 ODY 601 B 1 HETATM 5 C C8 ODY . . . I 3 62.929 28.234 89.775 1 67.84 ? C8 ODY 601 B 1 HETATM 6 C C9 ODY . . . I 3 62.123 28.828 90.745 1 63.7 ? C9 ODY 601 B 1 HETATM 7 C C10 ODY . . . I 3 62.489 30.03 91.324 1 56.1 ? C10 ODY 601 B 1 HETATM 8 C C12 ODY . . . I 3 64.476 30.097 89.974 1 65.3 ? C12 ODY 601 B 1 HETATM 9 C C3 ODY . . . I 3 63.633 26.302 88.498 1 58.57 ? C3 ODY 601 B 1 HETATM 10 C C1 ODY . . . I 3 61.317 26.302 89.452 1 70.84 ? C1 ODY 601 B 1 HETATM 11 C C2 ODY . . . I 3 62.661 26.929 89.192 1 67.03 ? C2 ODY 601 B 1 HETATM 12 O O6 ODY . . . I 3 64.916 28.395 88.412 1 57.01 ? O6 ODY 601 B 1 HETATM 13 O O13 ODY . . . I 3 65.637 30.702 89.621 1 71.45 ? O13 ODY 601 B 1 HETATM 14 C C15 ODY . . . I 3 65.902 26.053 90.363 1 41.2 ? C15 ODY 601 B 1 HETATM 15 C C16 ODY . . . I 3 66.944 25.608 91.152 1 37.34 ? C16 ODY 601 B 1 HETATM 16 C C17 ODY . . . I 3 68.207 25.448 90.605 1 35.02 ? C17 ODY 601 B 1 HETATM 17 C C18 ODY . . . I 3 68.415 25.734 89.269 1 38.45 ? C18 ODY 601 B 1 HETATM 18 C C19 ODY . . . I 3 67.364 26.198 88.492 1 41.85 ? C19 ODY 601 B 1 HETATM 19 O O20 ODY . . . I 3 69.089 24.987 91.558 1 31.29 ? O20 ODY 601 B 1 HETATM 20 C C21 ODY . . . I 3 70.428 24.727 91.199 1 24.47 ? C21 ODY 601 B 1 HETATM 21 C C22 ODY . . . I 3 71.061 24.239 92.451 1 37.4 ? C22 ODY 601 B 1 HETATM 22 N N23 ODY . . . I 3 72.003 25.21 93.006 1 66.96 ? N23 ODY 601 B 1 HETATM 23 C C24 ODY . . . I 3 73.298 25.297 92.272 1 79.61 ? C24 ODY 601 B 1 HETATM 24 C C25 ODY . . . I 3 74.061 25.091 93.611 1 178.2 ? C25 ODY 601 B 1 HETATM 25 C C26 ODY . . . I 3 72.679 24.814 94.275 1 71.93 ? C26 ODY 601 B 1 HETATM 26 C C27 ODY . . . I 3 75.016 23.887 93.603 1 176.56 ? C27 ODY 601 B 1 HETATM 27 F F28 ODY . . . I 3 75.74 23.838 92.412 1 175.84 ? F28 ODY 601 B 1 HETATM 28 C C29 ODY . . . I 3 63.565 24.916 87.996 1 67.02 ? C29 ODY 601 B 1 HETATM 29 C C30 ODY . . . I 3 64.177 23.879 88.689 1 71.42 ? C30 ODY 601 B 1 HETATM 30 C C31 ODY . . . I 3 64.183 22.599 88.169 1 73.75 ? C31 ODY 601 B 1 HETATM 31 C C32 ODY . . . I 3 63.576 22.337 86.955 1 70 ? C32 ODY 601 B 1 HETATM 32 C C33 ODY . . . I 3 62.951 23.364 86.266 1 70.66 ? C33 ODY 601 B 1 HETATM 33 C C34 ODY . . . I 3 62.933 24.652 86.784 1 71.17 ? C34 ODY 601 B 1 HETATM 34 O O35 ODY . . . I 3 62.363 23.114 85.063 1 78.57 ? O35 ODY 601 B 1 HETATM 35 H H5 ODY . . . I 3 65.185 26.924 87.144 1 57.52 ? H5 ODY 601 B 1 HETATM 36 H H41 ODY . . . I 3 63.955 31.607 91.402 1 73.44 ? H41 ODY 601 B 1 HETATM 37 H H39 ODY . . . I 3 61.199 28.334 91.043 1 76.44 ? H39 ODY 601 B 1 HETATM 38 H H40 ODY . . . I 3 61.858 30.488 92.084 1 67.32 ? H40 ODY 601 B 1 HETATM 39 H H38 ODY . . . I 3 61.304 25.243 89.201 1 85 ? H38 ODY 601 B 1 HETATM 40 H H37 ODY . . . I 3 60.552 26.789 88.849 1 85 ? H37 ODY 601 B 1 HETATM 41 H H36 ODY . . . I 3 61 26.386 90.491 1 85 ? H36 ODY 601 B 1 HETATM 42 H H42 ODY . . . I 3 65.748 31.545 90.133 1 85.74 ? H42 ODY 601 B 1 HETATM 43 H H43 ODY . . . I 3 64.918 26.146 90.821 1 49.43 ? H43 ODY 601 B 1 HETATM 44 H H44 ODY . . . I 3 66.771 25.383 92.204 1 44.81 ? H44 ODY 601 B 1 HETATM 45 H H45 ODY . . . I 3 69.377 25.615 88.773 1 46.15 ? H45 ODY 601 B 1 HETATM 46 H H46 ODY . . . I 3 67.546 26.425 87.443 1 50.22 ? H46 ODY 601 B 1 HETATM 47 H H48 ODY . . . I 3 70.475 23.955 90.432 1 29.37 ? H48 ODY 601 B 1 HETATM 48 H H47 ODY . . . I 3 70.92 25.621 90.819 1 29.37 ? H47 ODY 601 B 1 HETATM 49 H H50 ODY . . . I 3 70.286 23.928 93.15 1 44.88 ? H50 ODY 601 B 1 HETATM 50 H H49 ODY . . . I 3 71.634 23.343 92.217 1 44.88 ? H49 ODY 601 B 1 HETATM 51 H H51 ODY . . . I 3 73.552 26.217 91.749 1 95.53 ? H51 ODY 601 B 1 HETATM 52 H H52 ODY . . . I 3 73.391 24.488 91.549 1 95.53 ? H52 ODY 601 B 1 HETATM 53 H H53 ODY . . . I 3 74.568 25.976 93.992 1 213.84 ? H53 ODY 601 B 1 HETATM 54 H H55 ODY . . . I 3 72.476 25.386 95.179 1 86.31 ? H55 ODY 601 B 1 HETATM 55 H H54 ODY . . . I 3 72.483 23.773 94.526 1 86.31 ? H54 ODY 601 B 1 HETATM 56 H H57 ODY . . . I 3 74.458 22.958 93.706 1 211.87 ? H57 ODY 601 B 1 HETATM 57 H H56 ODY . . . I 3 75.723 23.922 94.431 1 211.87 ? H56 ODY 601 B 1 HETATM 58 H H58 ODY . . . I 3 64.653 24.083 89.646 1 85.71 ? H58 ODY 601 B 1 HETATM 59 H H59 ODY . . . I 3 64.666 21.79 88.716 1 88.5 ? H59 ODY 601 B 1 HETATM 60 H H60 ODY . . . I 3 63.584 21.333 86.534 1 84 ? H60 ODY 601 B 1 HETATM 61 H H61 ODY . . . I 3 62.428 25.453 86.247 1 85.4 ? H61 ODY 601 B 1 HETATM 62 H H62 ODY . . . I 3 61.582 23.724 85.002 1 94.29 ? H62 ODY 601 B 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 62 #