data_6PET
#
_model_server_result.job_id            zzE13CFVi5_e0JQtqW_yEQ 
_model_server_result.datetime_utc      '2024-11-28 17:02:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6pet 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":602}' 
#
_entry.id    6PET 
#
_exptl.entry_id    6PET 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         77.57 
_cell.angle_beta          74.4 
_cell.angle_gamma         63.09 
_cell.entry_id            6PET 
_cell.length_a            53.173 
_cell.length_b            58.746 
_cell.length_c            92.934 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 6PET 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,K,L 1 1 
C,D,H,I,J,M,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             J 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     6PET 
_atom_sites.fract_transf_matrix[1][1]    0.018807 
_atom_sites.fract_transf_matrix[1][2]    -0.009544 
_atom_sites.fract_transf_matrix[1][3]    -0.004235 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019089 
_atom_sites.fract_transf_matrix[2][3]    -0.002091 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011238 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 G9J D 1 601 1 G9J RRG . 
F 3 ODY A 1 601 2 ODY DRG . 
G 4 CL A 1 602 1 CL CL . 
H 2 G9J C 1 601 2 G9J RRG . 
I 3 ODY B 1 601 1 ODY DRG . 
J 5 DMS B 1 602 1 DMS DMS . 
K 6 HOH D 1 701 120 HOH HOH . 
K 6 HOH D 2 702 95 HOH HOH . 
K 6 HOH D 3 703 20 HOH HOH . 
K 6 HOH D 4 704 9 HOH HOH . 
K 6 HOH D 5 705 226 HOH HOH . 
K 6 HOH D 6 706 117 HOH HOH . 
K 6 HOH D 7 707 227 HOH HOH . 
K 6 HOH D 8 708 43 HOH HOH . 
K 6 HOH D 9 709 50 HOH HOH . 
K 6 HOH D 10 710 225 HOH HOH . 
K 6 HOH D 11 711 7 HOH HOH . 
K 6 HOH D 12 712 36 HOH HOH . 
K 6 HOH D 13 713 135 HOH HOH . 
K 6 HOH D 14 714 211 HOH HOH . 
K 6 HOH D 15 715 119 HOH HOH . 
K 6 HOH D 16 716 125 HOH HOH . 
K 6 HOH D 17 717 47 HOH HOH . 
K 6 HOH D 18 718 116 HOH HOH . 
K 6 HOH D 19 719 1 HOH HOH . 
K 6 HOH D 20 720 16 HOH HOH . 
K 6 HOH D 21 721 3 HOH HOH . 
K 6 HOH D 22 722 85 HOH HOH . 
K 6 HOH D 23 723 71 HOH HOH . 
L 6 HOH A 1 701 224 HOH HOH . 
L 6 HOH A 2 702 165 HOH HOH . 
L 6 HOH A 3 703 112 HOH HOH . 
L 6 HOH A 4 704 94 HOH HOH . 
L 6 HOH A 5 705 92 HOH HOH . 
L 6 HOH A 6 706 123 HOH HOH . 
L 6 HOH A 7 707 84 HOH HOH . 
L 6 HOH A 8 708 96 HOH HOH . 
L 6 HOH A 9 709 93 HOH HOH . 
L 6 HOH A 10 710 163 HOH HOH . 
L 6 HOH A 11 711 223 HOH HOH . 
L 6 HOH A 12 712 128 HOH HOH . 
L 6 HOH A 13 713 143 HOH HOH . 
L 6 HOH A 14 714 12 HOH HOH . 
L 6 HOH A 15 715 201 HOH HOH . 
L 6 HOH A 16 716 19 HOH HOH . 
L 6 HOH A 17 717 10 HOH HOH . 
L 6 HOH A 18 718 140 HOH HOH . 
L 6 HOH A 19 719 52 HOH HOH . 
L 6 HOH A 20 720 213 HOH HOH . 
L 6 HOH A 21 721 77 HOH HOH . 
L 6 HOH A 22 722 216 HOH HOH . 
L 6 HOH A 23 723 222 HOH HOH . 
M 6 HOH C 1 701 113 HOH HOH . 
M 6 HOH C 2 702 105 HOH HOH . 
M 6 HOH C 3 703 115 HOH HOH . 
M 6 HOH C 4 704 132 HOH HOH . 
M 6 HOH C 5 705 82 HOH HOH . 
M 6 HOH C 6 706 145 HOH HOH . 
M 6 HOH C 7 707 91 HOH HOH . 
M 6 HOH C 8 708 99 HOH HOH . 
M 6 HOH C 9 709 124 HOH HOH . 
M 6 HOH C 10 710 148 HOH HOH . 
M 6 HOH C 11 711 41 HOH HOH . 
M 6 HOH C 12 712 98 HOH HOH . 
M 6 HOH C 13 713 114 HOH HOH . 
M 6 HOH C 14 714 90 HOH HOH . 
M 6 HOH C 15 715 102 HOH HOH . 
M 6 HOH C 16 716 139 HOH HOH . 
M 6 HOH C 17 717 127 HOH HOH . 
M 6 HOH C 18 718 6 HOH HOH . 
M 6 HOH C 19 719 168 HOH HOH . 
M 6 HOH C 20 720 221 HOH HOH . 
M 6 HOH C 21 721 35 HOH HOH . 
M 6 HOH C 22 722 220 HOH HOH . 
M 6 HOH C 23 723 34 HOH HOH . 
N 6 HOH B 1 701 17 HOH HOH . 
N 6 HOH B 2 702 39 HOH HOH . 
N 6 HOH B 3 703 89 HOH HOH . 
N 6 HOH B 4 704 87 HOH HOH . 
N 6 HOH B 5 705 104 HOH HOH . 
N 6 HOH B 6 706 118 HOH HOH . 
N 6 HOH B 7 707 83 HOH HOH . 
N 6 HOH B 8 708 217 HOH HOH . 
N 6 HOH B 9 709 101 HOH HOH . 
N 6 HOH B 10 710 86 HOH HOH . 
N 6 HOH B 11 711 29 HOH HOH . 
N 6 HOH B 12 712 60 HOH HOH . 
N 6 HOH B 13 713 142 HOH HOH . 
N 6 HOH B 14 714 48 HOH HOH . 
N 6 HOH B 15 715 18 HOH HOH . 
N 6 HOH B 16 716 88 HOH HOH . 
N 6 HOH B 17 717 122 HOH HOH . 
N 6 HOH B 18 718 5 HOH HOH . 
N 6 HOH B 19 719 57 HOH HOH . 
N 6 HOH B 20 720 130 HOH HOH . 
N 6 HOH B 21 721 218 HOH HOH . 
N 6 HOH B 22 722 219 HOH HOH . 
N 6 HOH B 23 723 54 HOH HOH . 
N 6 HOH B 24 724 100 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . J 5 53.564 39.1 100.947 1 82.61 ? S DMS 602 B 1 
HETATM 2 O O DMS . . . J 5 54.221 38.016 100.134 1 83.3 ? O DMS 602 B 1 
HETATM 3 C C1 DMS . . . J 5 52.133 39.973 100.219 1 75.57 ? C1 DMS 602 B 1 
HETATM 4 C C2 DMS . . . J 5 52.618 38.005 101.963 1 98.14 ? C2 DMS 602 B 1 
HETATM 5 H H11 DMS . . . J 5 51.396 39.268 99.935 1 90.68 ? H11 DMS 602 B 1 
HETATM 6 H H12 DMS . . . J 5 52.448 40.518 99.367 1 90.68 ? H12 DMS 602 B 1 
HETATM 7 H H13 DMS . . . J 5 51.726 40.641 100.934 1 90.68 ? H13 DMS 602 B 1 
HETATM 8 H H21 DMS . . . J 5 53.272 37.422 102.558 1 117.77 ? H21 DMS 602 B 1 
HETATM 9 H H22 DMS . . . J 5 52.037 37.367 101.349 1 117.77 ? H22 DMS 602 B 1 
HETATM 10 H H23 DMS . . . J 5 51.979 38.569 102.591 1 117.77 ? H23 DMS 602 B 1 
#
_model_server_stats.io_time_ms              47 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           10 
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