data_6PEY
#
_model_server_result.job_id            oefoX72svL8Jcb_jqAjWNA 
_model_server_result.datetime_utc      '2025-01-18 13:05:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6pey 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":401}' 
#
_entry.id    6PEY 
#
_exptl.entry_id    6PEY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          120.9 
_cell.angle_gamma         90 
_cell.entry_id            6PEY 
_cell.length_a            102.747 
_cell.length_b            127.744 
_cell.length_c            95.456 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6PEY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
PISA dimeric 2 software_defined_assembly 4 
PISA dimeric 2 software_defined_assembly 5 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,G 1 1 
B,E,H 2 1 
C,F,I 3 1 
A,C,D,F,G,I 4 1 
B,E,H 5 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     6PEY 
_atom_sites.fract_transf_matrix[1][1]    0.009733 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005825 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007828 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012209 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 FAD A 1 401 300 FAD FAD . 
E 2 FAD B 1 401 300 FAD FAD . 
F 2 FAD C 1 401 300 FAD FAD . 
G 3 HOH A 1 501 1 HOH HOH . 
H 3 HOH B 1 501 2 HOH HOH . 
I 3 HOH C 1 501 3 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . D 2 -30.007 -13.744 -32.168 1 136.99 ? PA FAD 401 A 1 
HETATM 2 O O1A FAD . . . D 2 -30.534 -13.756 -33.572 1 126.37 ? O1A FAD 401 A 1 
HETATM 3 O O2A FAD . . . D 2 -29.378 -12.478 -31.687 1 132.58 ? O2A FAD 401 A 1 
HETATM 4 O O5B FAD . . . D 2 -28.972 -14.959 -31.968 1 135.43 ? O5B FAD 401 A 1 
HETATM 5 C C5B FAD . . . D 2 -29.443 -16.326 -31.784 1 141.66 ? C5B FAD 401 A 1 
HETATM 6 C C4B FAD . . . D 2 -28.401 -17.297 -32.288 1 145.14 ? C4B FAD 401 A 1 
HETATM 7 O O4B FAD . . . D 2 -28.371 -17.255 -33.739 1 156.66 ? O4B FAD 401 A 1 
HETATM 8 C C3B FAD . . . D 2 -26.956 -17.028 -31.845 1 153.97 ? C3B FAD 401 A 1 
HETATM 9 O O3B FAD . . . D 2 -26.247 -18.249 -31.667 1 163.41 ? O3B FAD 401 A 1 
HETATM 10 C C2B FAD . . . D 2 -26.396 -16.223 -33.02 1 155.37 ? C2B FAD 401 A 1 
HETATM 11 O O2B FAD . . . D 2 -24.983 -16.259 -33.052 1 130.53 ? O2B FAD 401 A 1 
HETATM 12 C C1B FAD . . . D 2 -27.066 -16.952 -34.185 1 160.22 ? C1B FAD 401 A 1 
HETATM 13 N N9A FAD . . . D 2 -27.167 -16.199 -35.453 1 158.62 ? N9A FAD 401 A 1 
HETATM 14 C C8A FAD . . . D 2 -27.312 -14.837 -35.623 1 160.47 ? C8A FAD 401 A 1 
HETATM 15 N N7A FAD . . . D 2 -27.358 -14.485 -36.888 1 158.48 ? N7A FAD 401 A 1 
HETATM 16 C C5A FAD . . . D 2 -27.238 -15.679 -37.589 1 158.94 ? C5A FAD 401 A 1 
HETATM 17 C C6A FAD . . . D 2 -27.218 -15.974 -38.968 1 173.28 ? C6A FAD 401 A 1 
HETATM 18 N N6A FAD . . . D 2 -27.319 -15.049 -39.921 1 119.96 ? N6A FAD 401 A 1 
HETATM 19 N N1A FAD . . . D 2 -27.085 -17.279 -39.323 1 173.19 ? N1A FAD 401 A 1 
HETATM 20 C C2A FAD . . . D 2 -26.984 -18.203 -38.355 1 164.24 ? C2A FAD 401 A 1 
HETATM 21 N N3A FAD . . . D 2 -26.989 -18.04 -37.032 1 153.27 ? N3A FAD 401 A 1 
HETATM 22 C C4A FAD . . . D 2 -27.121 -16.74 -36.712 1 155.82 ? C4A FAD 401 A 1 
HETATM 23 N N1 FAD . . . D 2 -36.172 -16.361 -24.473 1 140.03 ? N1 FAD 401 A 1 
HETATM 24 C C2 FAD . . . D 2 -37.534 -16.41 -24.614 1 135.56 ? C2 FAD 401 A 1 
HETATM 25 O O2 FAD . . . D 2 -38.088 -17.382 -25.135 1 115.56 ? O2 FAD 401 A 1 
HETATM 26 N N3 FAD . . . D 2 -38.343 -15.402 -24.172 1 136.41 ? N3 FAD 401 A 1 
HETATM 27 C C4 FAD . . . D 2 -37.83 -14.276 -23.573 1 133.38 ? C4 FAD 401 A 1 
HETATM 28 O O4 FAD . . . D 2 -38.589 -13.397 -23.196 1 123.57 ? O4 FAD 401 A 1 
HETATM 29 C C4X FAD . . . D 2 -36.416 -14.166 -23.452 1 141.34 ? C4X FAD 401 A 1 
HETATM 30 N N5 FAD . . . D 2 -35.915 -13.077 -22.919 1 133.99 ? N5 FAD 401 A 1 
HETATM 31 C C5X FAD . . . D 2 -34.548 -12.967 -22.85 1 129.47 ? C5X FAD 401 A 1 
HETATM 32 C C6 FAD . . . D 2 -34.015 -11.776 -22.317 1 113.14 ? C6 FAD 401 A 1 
HETATM 33 C C7 FAD . . . D 2 -32.663 -11.557 -22.233 1 94.79 ? C7 FAD 401 A 1 
HETATM 34 C C7M FAD . . . D 2 -32.16 -10.248 -21.684 1 87.92 ? C7M FAD 401 A 1 
HETATM 35 C C8 FAD . . . D 2 -31.774 -12.583 -22.645 1 97.86 ? C8 FAD 401 A 1 
HETATM 36 C C8M FAD . . . D 2 -30.285 -12.39 -22.529 1 90.89 ? C8M FAD 401 A 1 
HETATM 37 C C9 FAD . . . D 2 -32.282 -13.78 -23.153 1 106.77 ? C9 FAD 401 A 1 
HETATM 38 C C9A FAD . . . D 2 -33.671 -13.996 -23.279 1 128.36 ? C9A FAD 401 A 1 
HETATM 39 N N10 FAD . . . D 2 -34.242 -15.168 -23.81 1 140.25 ? N10 FAD 401 A 1 
HETATM 40 C C10 FAD . . . D 2 -35.633 -15.28 -23.936 1 145.38 ? C10 FAD 401 A 1 
HETATM 41 C C1' FAD . . . D 2 -33.39 -16.273 -24.31 1 139.11 ? C1' FAD 401 A 1 
HETATM 42 C C2' FAD . . . D 2 -33.042 -16.149 -25.804 1 139.89 ? C2' FAD 401 A 1 
HETATM 43 O O2' FAD . . . D 2 -34.123 -15.574 -26.537 1 147.23 ? O2' FAD 401 A 1 
HETATM 44 C C3' FAD . . . D 2 -32.689 -17.49 -26.468 1 138.14 ? C3' FAD 401 A 1 
HETATM 45 O O3' FAD . . . D 2 -31.513 -18.061 -25.884 1 127.09 ? O3' FAD 401 A 1 
HETATM 46 C C4' FAD . . . D 2 -32.493 -17.418 -27.989 1 142.44 ? C4' FAD 401 A 1 
HETATM 47 O O4' FAD . . . D 2 -31.982 -18.677 -28.433 1 144.64 ? O4' FAD 401 A 1 
HETATM 48 C C5' FAD . . . D 2 -31.548 -16.326 -28.454 1 140.02 ? C5' FAD 401 A 1 
HETATM 49 O O5' FAD . . . D 2 -32.236 -15.183 -29.075 1 128.69 ? O5' FAD 401 A 1 
HETATM 50 P P FAD . . . D 2 -31.38 -13.904 -29.557 1 115.45 ? P FAD 401 A 1 
HETATM 51 O O1P FAD . . . D 2 -32.158 -12.638 -29.366 1 101.22 ? O1P FAD 401 A 1 
HETATM 52 O O2P FAD . . . D 2 -30.044 -14.044 -28.915 1 116.32 ? O2P FAD 401 A 1 
HETATM 53 O O3P FAD . . . D 2 -31.171 -14.151 -31.13 1 126.34 ? O3P FAD 401 A 1 
#
_model_server_stats.io_time_ms              96 
_model_server_stats.parse_time_ms           143 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           219 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           53 
#