data_6PF1 # _model_server_result.job_id XQMqVHOtN5pKf_czdd22qg _model_server_result.datetime_utc '2024-10-19 04:35:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6pf1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1701}' # _entry.id 6PF1 # _exptl.entry_id 6PF1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6PF1 _cell.length_a 65.062 _cell.length_b 90.634 _cell.length_c 112.95 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PF1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 70 n y N1A C6A COA doub 71 n y C2A N3A COA doub 72 n y C2A H2A COA sing 73 n n N3A C4A COA sing 74 n y C4A C5A COA doub 75 n y C4A N9A COA sing 76 n y C5A C6A COA sing 77 n y C5A N7A COA sing 78 n y C6A N6A COA sing 79 n n N6A H61A COA sing 80 n n N6A H62A COA sing 81 n n N7A C8A COA doub 82 n y C8A N9A COA sing 83 n y C8A H8A COA sing 84 n n N9A C1B COA sing 85 n n C1B C2B COA sing 86 n n C1B O4B COA sing 87 n n C1B H1B COA sing 88 n n C2B O2B COA sing 89 n n C2B C3B COA sing 90 n n C2B H2B COA sing 91 n n O2B HO2A COA sing 92 n n C3B O3B COA sing 93 n n C3B C4B COA sing 94 n n C3B H3B COA sing 95 n n O3B P3B COA sing 96 n n P3B O7A COA doub 97 n n P3B O8A COA sing 98 n n P3B O9A COA sing 99 n n O8A HOA8 COA sing 100 n n O9A HOA9 COA sing 101 n n C4B O4B COA sing 102 n n C4B C5B COA sing 103 n n C4B H4B COA sing 104 n n C5B O5B COA sing 105 n n C5B H51A COA sing 106 n n C5B H52A COA sing 107 n n O5B P1A COA sing 108 n n P1A O1A COA doub 109 n n P1A O2A COA sing 110 n n P1A O3A COA sing 111 n n O2A HOA2 COA sing 112 n n O3A P2A COA sing 113 n n P2A O4A COA doub 114 n n P2A O5A COA sing 115 n n P2A O6A COA sing 116 n n O5A HOA5 COA sing 117 n n O6A CCP COA sing 118 n n CBP CCP COA sing 119 n n CBP CDP COA sing 120 n n CBP CEP COA sing 121 n n CBP CAP COA sing 122 n n CCP H121 COA sing 123 n n CCP H122 COA sing 124 n n CDP H131 COA sing 125 n n CDP H132 COA sing 126 n n CDP H133 COA sing 127 n n CEP H141 COA sing 128 n n CEP H142 COA sing 129 n n CEP H143 COA sing 130 n n CAP OAP COA sing 131 n n CAP C9P COA sing 132 n n CAP H10 COA sing 133 n n OAP HO1 COA sing 134 n n C9P O9P COA doub 135 n n C9P N8P COA sing 136 n n N8P C7P COA sing 137 n n N8P HN8 COA sing 138 n n C7P C6P COA sing 139 n n C7P H71 COA sing 140 n n C7P H72 COA sing 141 n n C6P C5P COA sing 142 n n C6P H61 COA sing 143 n n C6P H62 COA sing 144 n n C5P O5P COA doub 145 n n C5P N4P COA sing 146 n n N4P C3P COA sing 147 n n N4P HN4 COA sing 148 n n C3P C2P COA sing 149 n n C3P H31 COA sing 150 n n C3P H32 COA sing 151 n n C2P S1P COA sing 152 n n C2P H21 COA sing 153 n n C2P H22 COA sing 154 n n S1P HS1 COA sing 155 n n # _atom_sites.entry_id 6PF1 _atom_sites.fract_transf_matrix[1][1] 0.01537 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011033 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008853 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 COA A 1 1701 2 COA COA . D 3 OJ7 A 1 1702 2 OJ7 DRG . E 2 COA B 1 1701 2 COA COA . F 3 OJ7 B 1 1702 1 OJ7 DRG . G 4 HOH A 1 1801 55 HOH HOH . G 4 HOH A 2 1802 58 HOH HOH . G 4 HOH A 3 1803 45 HOH HOH . G 4 HOH A 4 1804 41 HOH HOH . G 4 HOH A 5 1805 24 HOH HOH . G 4 HOH A 6 1806 33 HOH HOH . G 4 HOH A 7 1807 49 HOH HOH . G 4 HOH A 8 1808 9 HOH HOH . G 4 HOH A 9 1809 42 HOH HOH . G 4 HOH A 10 1810 29 HOH HOH . G 4 HOH A 11 1811 30 HOH HOH . G 4 HOH A 12 1812 16 HOH HOH . G 4 HOH A 13 1813 4 HOH HOH . G 4 HOH A 14 1814 38 HOH HOH . G 4 HOH A 15 1815 43 HOH HOH . G 4 HOH A 16 1816 77 HOH HOH . G 4 HOH A 17 1817 11 HOH HOH . G 4 HOH A 18 1818 19 HOH HOH . G 4 HOH A 19 1819 31 HOH HOH . G 4 HOH A 20 1820 6 HOH HOH . G 4 HOH A 21 1821 79 HOH HOH . G 4 HOH A 22 1822 20 HOH HOH . G 4 HOH A 23 1823 52 HOH HOH . G 4 HOH A 24 1824 51 HOH HOH . G 4 HOH A 25 1825 76 HOH HOH . G 4 HOH A 26 1826 82 HOH HOH . G 4 HOH A 27 1827 27 HOH HOH . G 4 HOH A 28 1828 48 HOH HOH . G 4 HOH A 29 1829 75 HOH HOH . G 4 HOH A 30 1830 53 HOH HOH . G 4 HOH A 31 1831 83 HOH HOH . G 4 HOH A 32 1832 54 HOH HOH . G 4 HOH A 33 1833 10 HOH HOH . G 4 HOH A 34 1834 35 HOH HOH . G 4 HOH A 35 1835 50 HOH HOH . G 4 HOH A 36 1836 22 HOH HOH . G 4 HOH A 37 1837 2 HOH HOH . G 4 HOH A 38 1838 81 HOH HOH . G 4 HOH A 39 1839 80 HOH HOH . G 4 HOH A 40 1840 25 HOH HOH . G 4 HOH A 41 1841 18 HOH HOH . G 4 HOH A 42 1842 56 HOH HOH . G 4 HOH A 43 1843 46 HOH HOH . G 4 HOH A 44 1844 74 HOH HOH . G 4 HOH A 45 1845 69 HOH HOH . G 4 HOH A 46 1846 1 HOH HOH . G 4 HOH A 47 1847 57 HOH HOH . G 4 HOH A 48 1848 47 HOH HOH . G 4 HOH A 49 1849 5 HOH HOH . G 4 HOH A 50 1850 14 HOH HOH . G 4 HOH A 51 1851 32 HOH HOH . G 4 HOH A 52 1852 85 HOH HOH . H 4 HOH B 1 1801 15 HOH HOH . H 4 HOH B 2 1802 86 HOH HOH . H 4 HOH B 3 1803 12 HOH HOH . H 4 HOH B 4 1804 44 HOH HOH . H 4 HOH B 5 1805 63 HOH HOH . H 4 HOH B 6 1806 23 HOH HOH . H 4 HOH B 7 1807 67 HOH HOH . H 4 HOH B 8 1808 34 HOH HOH . H 4 HOH B 9 1809 7 HOH HOH . H 4 HOH B 10 1810 68 HOH HOH . H 4 HOH B 11 1811 26 HOH HOH . H 4 HOH B 12 1812 64 HOH HOH . H 4 HOH B 13 1813 65 HOH HOH . H 4 HOH B 14 1814 78 HOH HOH . H 4 HOH B 15 1815 62 HOH HOH . H 4 HOH B 16 1816 28 HOH HOH . H 4 HOH B 17 1817 71 HOH HOH . H 4 HOH B 18 1818 73 HOH HOH . H 4 HOH B 19 1819 3 HOH HOH . H 4 HOH B 20 1820 72 HOH HOH . H 4 HOH B 21 1821 60 HOH HOH . H 4 HOH B 22 1822 21 HOH HOH . H 4 HOH B 23 1823 36 HOH HOH . H 4 HOH B 24 1824 17 HOH HOH . H 4 HOH B 25 1825 13 HOH HOH . H 4 HOH B 26 1826 59 HOH HOH . H 4 HOH B 27 1827 37 HOH HOH . H 4 HOH B 28 1828 40 HOH HOH . H 4 HOH B 29 1829 66 HOH HOH . H 4 HOH B 30 1830 70 HOH HOH . H 4 HOH B 31 1831 61 HOH HOH . H 4 HOH B 32 1832 39 HOH HOH . H 4 HOH B 33 1833 8 HOH HOH . H 4 HOH B 34 1834 84 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . C 2 8.832 -1.639 16.075 1 34.07 ? N1A COA 1701 A 1 HETATM 2 C C2A COA . . . C 2 9.98 -2.322 15.903 1 33.32 ? C2A COA 1701 A 1 HETATM 3 N N3A COA . . . C 2 10.02 -3.662 15.898 1 33.1 ? N3A COA 1701 A 1 HETATM 4 C C4A COA . . . C 2 8.882 -4.389 16.068 1 31.86 ? C4A COA 1701 A 1 HETATM 5 C C5A COA . . . C 2 7.593 -3.721 16.276 1 32.59 ? C5A COA 1701 A 1 HETATM 6 C C6A COA . . . C 2 7.636 -2.245 16.29 1 33.12 ? C6A COA 1701 A 1 HETATM 7 N N6A COA . . . C 2 6.498 -1.559 16.495 1 29.87 ? N6A COA 1701 A 1 HETATM 8 N N7A COA . . . C 2 6.645 -4.654 16.43 1 29.55 ? N7A COA 1701 A 1 HETATM 9 C C8A COA . . . C 2 7.288 -5.837 16.334 1 30.82 ? C8A COA 1701 A 1 HETATM 10 N N9A COA . . . C 2 8.61 -5.675 16.104 1 31.78 ? N9A COA 1701 A 1 HETATM 11 C C1B COA . . . C 2 9.654 -6.718 15.948 1 31.03 ? C1B COA 1701 A 1 HETATM 12 C C2B COA . . . C 2 9.636 -7.655 17.133 1 31.72 ? C2B COA 1701 A 1 HETATM 13 O O2B COA . . . C 2 10.288 -7.094 18.265 1 30.36 ? O2B COA 1701 A 1 HETATM 14 C C3B COA . . . C 2 10.316 -8.858 16.545 1 34.69 ? C3B COA 1701 A 1 HETATM 15 O O3B COA . . . C 2 11.738 -8.773 16.537 1 37.01 ? O3B COA 1701 A 1 HETATM 16 P P3B COA . . . C 2 12.553 -10.132 16.701 1 41.22 ? P3B COA 1701 A 1 HETATM 17 O O7A COA . . . C 2 12.072 -11.037 15.595 1 40 ? O7A COA 1701 A 1 HETATM 18 O O8A COA . . . C 2 14.002 -9.703 16.599 1 48.91 ? O8A COA 1701 A 1 HETATM 19 O O9A COA . . . C 2 12.216 -10.563 18.105 1 48.98 ? O9A COA 1701 A 1 HETATM 20 C C4B COA . . . C 2 9.853 -8.854 15.094 1 32.03 ? C4B COA 1701 A 1 HETATM 21 O O4B COA . . . C 2 9.457 -7.531 14.804 1 29.6 ? O4B COA 1701 A 1 HETATM 22 C C5B COA . . . C 2 8.699 -9.829 14.889 1 32.83 ? C5B COA 1701 A 1 HETATM 23 O O5B COA . . . C 2 7.582 -9.523 15.75 1 32.56 ? O5B COA 1701 A 1 HETATM 24 P P1A COA . . . C 2 6.043 -9.525 15.262 1 32.12 ? P1A COA 1701 A 1 HETATM 25 O O1A COA . . . C 2 5.224 -9.175 16.481 1 28.63 ? O1A COA 1701 A 1 HETATM 26 O O2A COA . . . C 2 5.793 -8.696 14.039 1 29.33 ? O2A COA 1701 A 1 HETATM 27 O O3A COA . . . C 2 5.911 -11.055 14.731 1 28.04 ? O3A COA 1701 A 1 HETATM 28 P P2A COA . . . C 2 5.622 -12.34 15.662 1 26.06 ? P2A COA 1701 A 1 HETATM 29 O O4A COA . . . C 2 5.636 -13.466 14.671 1 26.03 ? O4A COA 1701 A 1 HETATM 30 O O5A COA . . . C 2 6.516 -12.36 16.841 1 23.51 ? O5A COA 1701 A 1 HETATM 31 O O6A COA . . . C 2 4.158 -12.021 16.29 1 26.32 ? O6A COA 1701 A 1 HETATM 32 C CBP COA . . . C 2 1.817 -11.518 16.338 1 25.92 ? CBP COA 1701 A 1 HETATM 33 C CCP COA . . . C 2 3.092 -11.492 15.512 1 25.03 ? CCP COA 1701 A 1 HETATM 34 C CDP COA . . . C 2 0.664 -10.998 15.463 1 24.8 ? CDP COA 1701 A 1 HETATM 35 C CEP COA . . . C 2 1.522 -12.964 16.77 1 24.42 ? CEP COA 1701 A 1 HETATM 36 C CAP COA . . . C 2 2.105 -10.661 17.585 1 26.88 ? CAP COA 1701 A 1 HETATM 37 O OAP COA . . . C 2 2.734 -9.414 17.283 1 27.49 ? OAP COA 1701 A 1 HETATM 38 C C9P COA . . . C 2 0.881 -10.367 18.382 1 27.24 ? C9P COA 1701 A 1 HETATM 39 O O9P COA . . . C 2 0.55 -11.229 19.159 1 31.23 ? O9P COA 1701 A 1 HETATM 40 N N8P COA . . . C 2 0.241 -9.209 18.229 1 28.82 ? N8P COA 1701 A 1 HETATM 41 C C7P COA . . . C 2 -1.026 -8.929 18.911 1 30.17 ? C7P COA 1701 A 1 HETATM 42 C C6P COA . . . C 2 -2.237 -9.646 18.259 1 30.73 ? C6P COA 1701 A 1 HETATM 43 C C5P COA . . . C 2 -2.566 -9.145 16.867 1 31.93 ? C5P COA 1701 A 1 HETATM 44 O O5P COA . . . C 2 -1.92 -8.198 16.5 1 29.59 ? O5P COA 1701 A 1 HETATM 45 N N4P COA . . . C 2 -3.566 -9.704 16.13 1 34.76 ? N4P COA 1701 A 1 HETATM 46 C C3P COA . . . C 2 -4.021 -9.09 14.888 1 38.1 ? C3P COA 1701 A 1 HETATM 47 C C2P COA . . . C 2 -4.975 -9.852 13.962 1 41.45 ? C2P COA 1701 A 1 HETATM 48 S S1P COA . . . C 2 -6.536 -10.31 14.747 1 58.32 ? S1P COA 1701 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 48 #