data_6PF1 # _model_server_result.job_id kwm4b6KmUivwyjkEJDDC3g _model_server_result.datetime_utc '2024-11-23 03:17:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6pf1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1701}' # _entry.id 6PF1 # _exptl.entry_id 6PF1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6PF1 _cell.length_a 65.062 _cell.length_b 90.634 _cell.length_c 112.95 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PF1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 70 n y N1A C6A COA doub 71 n y C2A N3A COA doub 72 n y C2A H2A COA sing 73 n n N3A C4A COA sing 74 n y C4A C5A COA doub 75 n y C4A N9A COA sing 76 n y C5A C6A COA sing 77 n y C5A N7A COA sing 78 n y C6A N6A COA sing 79 n n N6A H61A COA sing 80 n n N6A H62A COA sing 81 n n N7A C8A COA doub 82 n y C8A N9A COA sing 83 n y C8A H8A COA sing 84 n n N9A C1B COA sing 85 n n C1B C2B COA sing 86 n n C1B O4B COA sing 87 n n C1B H1B COA sing 88 n n C2B O2B COA sing 89 n n C2B C3B COA sing 90 n n C2B H2B COA sing 91 n n O2B HO2A COA sing 92 n n C3B O3B COA sing 93 n n C3B C4B COA sing 94 n n C3B H3B COA sing 95 n n O3B P3B COA sing 96 n n P3B O7A COA doub 97 n n P3B O8A COA sing 98 n n P3B O9A COA sing 99 n n O8A HOA8 COA sing 100 n n O9A HOA9 COA sing 101 n n C4B O4B COA sing 102 n n C4B C5B COA sing 103 n n C4B H4B COA sing 104 n n C5B O5B COA sing 105 n n C5B H51A COA sing 106 n n C5B H52A COA sing 107 n n O5B P1A COA sing 108 n n P1A O1A COA doub 109 n n P1A O2A COA sing 110 n n P1A O3A COA sing 111 n n O2A HOA2 COA sing 112 n n O3A P2A COA sing 113 n n P2A O4A COA doub 114 n n P2A O5A COA sing 115 n n P2A O6A COA sing 116 n n O5A HOA5 COA sing 117 n n O6A CCP COA sing 118 n n CBP CCP COA sing 119 n n CBP CDP COA sing 120 n n CBP CEP COA sing 121 n n CBP CAP COA sing 122 n n CCP H121 COA sing 123 n n CCP H122 COA sing 124 n n CDP H131 COA sing 125 n n CDP H132 COA sing 126 n n CDP H133 COA sing 127 n n CEP H141 COA sing 128 n n CEP H142 COA sing 129 n n CEP H143 COA sing 130 n n CAP OAP COA sing 131 n n CAP C9P COA sing 132 n n CAP H10 COA sing 133 n n OAP HO1 COA sing 134 n n C9P O9P COA doub 135 n n C9P N8P COA sing 136 n n N8P C7P COA sing 137 n n N8P HN8 COA sing 138 n n C7P C6P COA sing 139 n n C7P H71 COA sing 140 n n C7P H72 COA sing 141 n n C6P C5P COA sing 142 n n C6P H61 COA sing 143 n n C6P H62 COA sing 144 n n C5P O5P COA doub 145 n n C5P N4P COA sing 146 n n N4P C3P COA sing 147 n n N4P HN4 COA sing 148 n n C3P C2P COA sing 149 n n C3P H31 COA sing 150 n n C3P H32 COA sing 151 n n C2P S1P COA sing 152 n n C2P H21 COA sing 153 n n C2P H22 COA sing 154 n n S1P HS1 COA sing 155 n n # _atom_sites.entry_id 6PF1 _atom_sites.fract_transf_matrix[1][1] 0.01537 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011033 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008853 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 COA A 1 1701 2 COA COA . D 3 OJ7 A 1 1702 2 OJ7 DRG . E 2 COA B 1 1701 2 COA COA . F 3 OJ7 B 1 1702 1 OJ7 DRG . G 4 HOH A 1 1801 55 HOH HOH . G 4 HOH A 2 1802 58 HOH HOH . G 4 HOH A 3 1803 45 HOH HOH . G 4 HOH A 4 1804 41 HOH HOH . G 4 HOH A 5 1805 24 HOH HOH . G 4 HOH A 6 1806 33 HOH HOH . G 4 HOH A 7 1807 49 HOH HOH . G 4 HOH A 8 1808 9 HOH HOH . G 4 HOH A 9 1809 42 HOH HOH . G 4 HOH A 10 1810 29 HOH HOH . G 4 HOH A 11 1811 30 HOH HOH . G 4 HOH A 12 1812 16 HOH HOH . G 4 HOH A 13 1813 4 HOH HOH . G 4 HOH A 14 1814 38 HOH HOH . G 4 HOH A 15 1815 43 HOH HOH . G 4 HOH A 16 1816 77 HOH HOH . G 4 HOH A 17 1817 11 HOH HOH . G 4 HOH A 18 1818 19 HOH HOH . G 4 HOH A 19 1819 31 HOH HOH . G 4 HOH A 20 1820 6 HOH HOH . G 4 HOH A 21 1821 79 HOH HOH . G 4 HOH A 22 1822 20 HOH HOH . G 4 HOH A 23 1823 52 HOH HOH . G 4 HOH A 24 1824 51 HOH HOH . G 4 HOH A 25 1825 76 HOH HOH . G 4 HOH A 26 1826 82 HOH HOH . G 4 HOH A 27 1827 27 HOH HOH . G 4 HOH A 28 1828 48 HOH HOH . G 4 HOH A 29 1829 75 HOH HOH . G 4 HOH A 30 1830 53 HOH HOH . G 4 HOH A 31 1831 83 HOH HOH . G 4 HOH A 32 1832 54 HOH HOH . G 4 HOH A 33 1833 10 HOH HOH . G 4 HOH A 34 1834 35 HOH HOH . G 4 HOH A 35 1835 50 HOH HOH . G 4 HOH A 36 1836 22 HOH HOH . G 4 HOH A 37 1837 2 HOH HOH . G 4 HOH A 38 1838 81 HOH HOH . G 4 HOH A 39 1839 80 HOH HOH . G 4 HOH A 40 1840 25 HOH HOH . G 4 HOH A 41 1841 18 HOH HOH . G 4 HOH A 42 1842 56 HOH HOH . G 4 HOH A 43 1843 46 HOH HOH . G 4 HOH A 44 1844 74 HOH HOH . G 4 HOH A 45 1845 69 HOH HOH . G 4 HOH A 46 1846 1 HOH HOH . G 4 HOH A 47 1847 57 HOH HOH . G 4 HOH A 48 1848 47 HOH HOH . G 4 HOH A 49 1849 5 HOH HOH . G 4 HOH A 50 1850 14 HOH HOH . G 4 HOH A 51 1851 32 HOH HOH . G 4 HOH A 52 1852 85 HOH HOH . H 4 HOH B 1 1801 15 HOH HOH . H 4 HOH B 2 1802 86 HOH HOH . H 4 HOH B 3 1803 12 HOH HOH . H 4 HOH B 4 1804 44 HOH HOH . H 4 HOH B 5 1805 63 HOH HOH . H 4 HOH B 6 1806 23 HOH HOH . H 4 HOH B 7 1807 67 HOH HOH . H 4 HOH B 8 1808 34 HOH HOH . H 4 HOH B 9 1809 7 HOH HOH . H 4 HOH B 10 1810 68 HOH HOH . H 4 HOH B 11 1811 26 HOH HOH . H 4 HOH B 12 1812 64 HOH HOH . H 4 HOH B 13 1813 65 HOH HOH . H 4 HOH B 14 1814 78 HOH HOH . H 4 HOH B 15 1815 62 HOH HOH . H 4 HOH B 16 1816 28 HOH HOH . H 4 HOH B 17 1817 71 HOH HOH . H 4 HOH B 18 1818 73 HOH HOH . H 4 HOH B 19 1819 3 HOH HOH . H 4 HOH B 20 1820 72 HOH HOH . H 4 HOH B 21 1821 60 HOH HOH . H 4 HOH B 22 1822 21 HOH HOH . H 4 HOH B 23 1823 36 HOH HOH . H 4 HOH B 24 1824 17 HOH HOH . H 4 HOH B 25 1825 13 HOH HOH . H 4 HOH B 26 1826 59 HOH HOH . H 4 HOH B 27 1827 37 HOH HOH . H 4 HOH B 28 1828 40 HOH HOH . H 4 HOH B 29 1829 66 HOH HOH . H 4 HOH B 30 1830 70 HOH HOH . H 4 HOH B 31 1831 61 HOH HOH . H 4 HOH B 32 1832 39 HOH HOH . H 4 HOH B 33 1833 8 HOH HOH . H 4 HOH B 34 1834 84 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . E 2 -7.451 27.438 -20.899 1 37.3 ? N1A COA 1701 B 1 HETATM 2 C C2A COA . . . E 2 -6.667 28.523 -21.101 1 39.86 ? C2A COA 1701 B 1 HETATM 3 N N3A COA . . . E 2 -5.366 28.554 -20.724 1 44.07 ? N3A COA 1701 B 1 HETATM 4 C C4A COA . . . E 2 -4.778 27.474 -20.128 1 39.76 ? C4A COA 1701 B 1 HETATM 5 C C5A COA . . . E 2 -5.582 26.265 -19.876 1 37.97 ? C5A COA 1701 B 1 HETATM 6 C C6A COA . . . E 2 -7.013 26.307 -20.293 1 36.89 ? C6A COA 1701 B 1 HETATM 7 N N6A COA . . . E 2 -7.815 25.234 -20.086 1 34.32 ? N6A COA 1701 B 1 HETATM 8 N N7A COA . . . E 2 -4.786 25.368 -19.278 1 35.22 ? N7A COA 1701 B 1 HETATM 9 C C8A COA . . . E 2 -3.565 25.939 -19.158 1 40.34 ? C8A COA 1701 B 1 HETATM 10 N N9A COA . . . E 2 -3.561 27.189 -19.671 1 41.24 ? N9A COA 1701 B 1 HETATM 11 C C1B COA . . . E 2 -2.406 28.118 -19.691 1 37.91 ? C1B COA 1701 B 1 HETATM 12 C C2B COA . . . E 2 -1.929 28.425 -18.277 1 36.51 ? C2B COA 1701 B 1 HETATM 13 O O2B COA . . . E 2 -2.68 29.473 -17.669 1 38.31 ? O2B COA 1701 B 1 HETATM 14 C C3B COA . . . E 2 -0.514 28.832 -18.538 1 36.09 ? C3B COA 1701 B 1 HETATM 15 O O3B COA . . . E 2 -0.466 30.204 -18.87 1 39.19 ? O3B COA 1701 B 1 HETATM 16 P P3B COA . . . E 2 0.788 31.092 -18.392 1 49.31 ? P3B COA 1701 B 1 HETATM 17 O O7A COA . . . E 2 1.95 30.303 -18.938 1 46.15 ? O7A COA 1701 B 1 HETATM 18 O O8A COA . . . E 2 0.62 32.426 -19.08 1 45.12 ? O8A COA 1701 B 1 HETATM 19 O O9A COA . . . E 2 0.669 31.081 -16.867 1 45.42 ? O9A COA 1701 B 1 HETATM 20 C C4B COA . . . E 2 -0.087 28.025 -19.757 1 32.92 ? C4B COA 1701 B 1 HETATM 21 O O4B COA . . . E 2 -1.294 27.548 -20.362 1 34.88 ? O4B COA 1701 B 1 HETATM 22 C C5B COA . . . E 2 0.811 26.851 -19.421 1 29.07 ? C5B COA 1701 B 1 HETATM 23 O O5B COA . . . E 2 0.137 26.012 -18.486 1 29.8 ? O5B COA 1701 B 1 HETATM 24 P P1A COA . . . E 2 0.063 24.408 -18.674 1 31.14 ? P1A COA 1701 B 1 HETATM 25 O O1A COA . . . E 2 -0.64 23.87 -17.468 1 31.16 ? O1A COA 1701 B 1 HETATM 26 O O2A COA . . . E 2 -0.302 24.042 -20.112 1 28.97 ? O2A COA 1701 B 1 HETATM 27 O O3A COA . . . E 2 1.646 24.023 -18.573 1 29.27 ? O3A COA 1701 B 1 HETATM 28 P P2A COA . . . E 2 2.551 24.023 -17.235 1 24 ? P2A COA 1701 B 1 HETATM 29 O O4A COA . . . E 2 3.967 23.771 -17.729 1 24.34 ? O4A COA 1701 B 1 HETATM 30 O O5A COA . . . E 2 2.156 25.138 -16.346 1 24.16 ? O5A COA 1701 B 1 HETATM 31 O O6A COA . . . E 2 2.071 22.71 -16.487 1 25.3 ? O6A COA 1701 B 1 HETATM 32 C CBP COA . . . E 2 1.247 20.488 -16.144 1 26.03 ? CBP COA 1701 B 1 HETATM 33 C CCP COA . . . E 2 1.785 21.48 -17.16 1 25.09 ? CCP COA 1701 B 1 HETATM 34 C CDP COA . . . E 2 0.839 19.255 -16.899 1 27.96 ? CDP COA 1701 B 1 HETATM 35 C CEP COA . . . E 2 2.385 20.116 -15.22 1 26.5 ? CEP COA 1701 B 1 HETATM 36 C CAP COA . . . E 2 0.075 21.097 -15.326 1 26.34 ? CAP COA 1701 B 1 HETATM 37 O OAP COA . . . E 2 -0.833 21.736 -16.237 1 27.06 ? OAP COA 1701 B 1 HETATM 38 C C9P COA . . . E 2 -0.674 20.138 -14.402 1 26.84 ? C9P COA 1701 B 1 HETATM 39 O O9P COA . . . E 2 -0.279 19.991 -13.254 1 27.45 ? O9P COA 1701 B 1 HETATM 40 N N8P COA . . . E 2 -1.757 19.489 -14.859 1 27.02 ? N8P COA 1701 B 1 HETATM 41 C C7P COA . . . E 2 -2.524 18.563 -14.041 1 28.37 ? C7P COA 1701 B 1 HETATM 42 C C6P COA . . . E 2 -2.019 17.109 -14.111 1 29.82 ? C6P COA 1701 B 1 HETATM 43 C C5P COA . . . E 2 -2.043 16.61 -15.533 1 31.42 ? C5P COA 1701 B 1 HETATM 44 O O5P COA . . . E 2 -2.704 17.235 -16.346 1 31.48 ? O5P COA 1701 B 1 HETATM 45 N N4P COA . . . E 2 -1.34 15.518 -15.843 1 33.16 ? N4P COA 1701 B 1 HETATM 46 C C3P COA . . . E 2 -1.36 15.009 -17.197 1 36.16 ? C3P COA 1701 B 1 HETATM 47 C C2P COA . . . E 2 -0.237 14.058 -17.56 1 38.78 ? C2P COA 1701 B 1 HETATM 48 S S1P COA . . . E 2 -0.697 12.342 -17.269 1 53.98 ? S1P COA 1701 B 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 48 #