data_6PF6
#
_model_server_result.job_id            wmQJYksAMUyNzlzk40Jqtg 
_model_server_result.datetime_utc      '2024-12-01 07:04:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6pf6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":601}' 
#
_entry.id    6PF6 
#
_exptl.entry_id    6PF6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              447.4 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-({4-[(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl]benzene-1-carbonyl}amino)benzene-1,4-dicarboxylic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6PF6 
_cell.length_a            152.215 
_cell.length_b            152.215 
_cell.length_c            107.07 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6PF6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,K,L 1 1 
C,H,I,M 2 1 
D,J,N 2 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 6_555 x+1/2,-y+1/2,-z+3/4 1 0 0 0 -1 0 0 0 -1 76.1075 76.1075 80.3025 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 I N N 
#
_chem_comp.formula           'C22 H17 N5 O6' 
_chem_comp.formula_weight    447.4 
_chem_comp.id                OEJ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-({4-[(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl]benzene-1-carbonyl}amino)benzene-1,4-dicarboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N4 C4 OEJ sing 237 n n 
N1 C4 OEJ doub 238 n n 
N1 C1 OEJ sing 239 n n 
C4 N2 OEJ sing 240 n n 
N3 C1 OEJ sing 241 n y 
N3 C6 OEJ sing 242 n y 
C1 C2 OEJ doub 243 n y 
O2 C14 OEJ doub 244 n n 
N2 C3 OEJ sing 245 n n 
C6 C5 OEJ doub 246 n y 
C12 C13 OEJ doub 247 n y 
C12 C11 OEJ sing 248 n y 
C2 C3 OEJ sing 249 n n 
C2 C5 OEJ sing 250 n y 
C13 C8 OEJ sing 251 n y 
O4 C21 OEJ doub 252 n n 
C3 O1 OEJ doub 253 n n 
C14 C11 OEJ sing 254 n n 
C14 N5 OEJ sing 255 n n 
C5 C7 OEJ sing 256 n n 
C11 C10 OEJ doub 257 n y 
C21 O3 OEJ sing 258 n n 
C21 C20 OEJ sing 259 n n 
C8 C7 OEJ sing 260 n n 
C8 C9 OEJ doub 261 n y 
C20 C19 OEJ doub 262 n y 
C20 C15 OEJ sing 263 n y 
N5 C15 OEJ sing 264 n n 
C19 C18 OEJ sing 265 n y 
C15 C16 OEJ doub 266 n y 
C10 C9 OEJ sing 267 n y 
C18 C17 OEJ doub 268 n y 
C16 C17 OEJ sing 269 n y 
C17 C22 OEJ sing 270 n n 
O5 C22 OEJ doub 271 n n 
C22 O6 OEJ sing 272 n n 
C13 H1 OEJ sing 273 n n 
C6 H2 OEJ sing 274 n n 
C7 H3 OEJ sing 275 n n 
C7 H4 OEJ sing 276 n n 
C10 H5 OEJ sing 277 n n 
C12 H6 OEJ sing 278 n n 
C16 H7 OEJ sing 279 n n 
C18 H8 OEJ sing 280 n n 
C19 H9 OEJ sing 281 n n 
C9 H10 OEJ sing 282 n n 
N2 H11 OEJ sing 283 n n 
N3 H12 OEJ sing 284 n n 
N4 H13 OEJ sing 285 n n 
N4 H14 OEJ sing 286 n n 
N5 H15 OEJ sing 287 n n 
O3 H16 OEJ sing 288 n n 
O6 H17 OEJ sing 289 n n 
#
_atom_sites.entry_id                     6PF6 
_atom_sites.fract_transf_matrix[1][1]    0.00657 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00657 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00934 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 UMP B 1 600 600 UMP UMP . 
F 3 OEJ B 1 601 601 OEJ T11 . 
G 2 UMP A 1 600 600 UMP UMP . 
H 2 UMP C 1 600 600 UMP UMP . 
I 3 OEJ C 1 601 601 OEJ T11 . 
J 2 UMP D 1 600 600 UMP UMP . 
K 4 HOH B 1 701 28 HOH HOH . 
K 4 HOH B 2 702 1 HOH HOH . 
K 4 HOH B 3 703 6 HOH HOH . 
K 4 HOH B 4 704 11 HOH HOH . 
K 4 HOH B 5 705 4 HOH HOH . 
K 4 HOH B 6 706 18 HOH HOH . 
L 4 HOH A 1 701 9 HOH HOH . 
L 4 HOH A 2 702 10 HOH HOH . 
L 4 HOH A 3 703 8 HOH HOH . 
L 4 HOH A 4 704 7 HOH HOH . 
L 4 HOH A 5 705 26 HOH HOH . 
M 4 HOH C 1 701 15 HOH HOH . 
M 4 HOH C 2 702 25 HOH HOH . 
M 4 HOH C 3 703 3 HOH HOH . 
M 4 HOH C 4 704 20 HOH HOH . 
M 4 HOH C 5 705 16 HOH HOH . 
M 4 HOH C 6 706 30 HOH HOH . 
N 4 HOH D 1 701 13 HOH HOH . 
N 4 HOH D 2 702 24 HOH HOH . 
N 4 HOH D 3 703 29 HOH HOH . 
N 4 HOH D 4 704 22 HOH HOH . 
N 4 HOH D 5 705 23 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C14 OEJ . . . F 3 48.995 22.64 12.17 1 70.18 ? C14 OEJ 601 B 1 
HETATM 2 C C13 OEJ . . . F 3 47.14 19.485 13.222 1 69.05 ? C13 OEJ 601 B 1 
HETATM 3 C C1 OEJ . . . F 3 41.731 20.679 15.041 1 70.4 ? C1 OEJ 601 B 1 
HETATM 4 C C6 OEJ . . . F 3 43.451 20.035 16.334 1 67.63 ? C6 OEJ 601 B 1 
HETATM 5 C C5 OEJ . . . F 3 43.781 19.715 15.037 1 71.82 ? C5 OEJ 601 B 1 
HETATM 6 C C4 OEJ . . . F 3 40.282 21.145 13.36 1 71.52 ? C4 OEJ 601 B 1 
HETATM 7 C C3 OEJ . . . F 3 42.37 20.082 12.776 1 71.1 ? C3 OEJ 601 B 1 
HETATM 8 C C2 OEJ . . . F 3 42.678 20.127 14.22 1 68.89 ? C2 OEJ 601 B 1 
HETATM 9 C C7 OEJ . . . F 3 45.057 19.048 14.585 1 70.26 ? C7 OEJ 601 B 1 
HETATM 10 C C10 OEJ . . . F 3 46.881 22.271 13.551 1 69.95 ? C10 OEJ 601 B 1 
HETATM 11 C C11 OEJ . . . F 3 47.961 21.754 12.799 1 67.86 ? C11 OEJ 601 B 1 
HETATM 12 C C12 OEJ . . . F 3 48.08 20.358 12.646 1 66.87 ? C12 OEJ 601 B 1 
HETATM 13 C C15 OEJ . . . F 3 50.022 24.932 12.48 1 73.95 ? C15 OEJ 601 B 1 
HETATM 14 C C16 OEJ . . . F 3 50.851 24.943 11.33 1 73.84 ? C16 OEJ 601 B 1 
HETATM 15 C C17 OEJ . . . F 3 51.726 26.015 11.061 1 74.94 ? C17 OEJ 601 B 1 
HETATM 16 C C18 OEJ . . . F 3 51.777 27.093 11.964 1 79.31 ? C18 OEJ 601 B 1 
HETATM 17 C C19 OEJ . . . F 3 50.968 27.097 13.113 1 74.54 ? C19 OEJ 601 B 1 
HETATM 18 C C20 OEJ . . . F 3 50.086 26.028 13.392 1 76.15 ? C20 OEJ 601 B 1 
HETATM 19 C C21 OEJ . . . F 3 49.246 26.095 14.648 1 81.07 ? C21 OEJ 601 B 1 
HETATM 20 C C22 OEJ . . . F 3 52.602 26.028 9.84 1 75.99 ? C22 OEJ 601 B 1 
HETATM 21 C C8 OEJ . . . F 3 46.064 20 13.968 1 68.98 ? C8 OEJ 601 B 1 
HETATM 22 C C9 OEJ . . . F 3 45.938 21.395 14.13 1 70.48 ? C9 OEJ 601 B 1 
HETATM 23 N N1 OEJ . . . F 3 40.511 21.204 14.645 1 70.51 ? N1 OEJ 601 B 1 
HETATM 24 N N2 OEJ . . . F 3 41.176 20.6 12.423 1 73.05 ? N2 OEJ 601 B 1 
HETATM 25 N N3 OEJ . . . F 3 42.203 20.625 16.33 1 71.86 ? N3 OEJ 601 B 1 
HETATM 26 N N4 OEJ . . . F 3 39.133 21.606 12.748 1 67.59 ? N4 OEJ 601 B 1 
HETATM 27 N N5 OEJ . . . F 3 49.143 23.842 12.762 1 75.94 ? N5 OEJ 601 B 1 
HETATM 28 O O1 OEJ . . . F 3 43.146 19.608 11.949 1 72.97 ? O1 OEJ 601 B 1 
HETATM 29 O O2 OEJ . . . F 3 49.628 22.235 11.195 1 72.73 ? O2 OEJ 601 B 1 
HETATM 30 O O3 OEJ . . . F 3 49.824 26.792 15.67 1 82.95 -1 O3 OEJ 601 B 1 
HETATM 31 O O4 OEJ . . . F 3 48.14 25.565 14.75 1 82.34 ? O4 OEJ 601 B 1 
HETATM 32 O O5 OEJ . . . F 3 53.463 26.891 9.678 1 81.05 ? O5 OEJ 601 B 1 
HETATM 33 O O6 OEJ . . . F 3 52.374 25.02 8.947 1 79.4 -1 O6 OEJ 601 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           293 
_model_server_stats.encode_time_ms          17 
_model_server_stats.element_count           33 
#