data_6PFM
#
_model_server_result.job_id            kgcbXTe8mqGsRtAmes7tfw 
_model_server_result.datetime_utc      '2024-11-26 02:28:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6pfm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":601}' 
#
_entry.id    6PFM 
#
_exptl.entry_id    6PFM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              461.525 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2S)-2-(4-{2-[3-(fluoromethyl)azetidin-1-yl]ethoxy}phenyl)-3-(3-hydroxyphenyl)-4-methyl-2H-1-benzopyran-6-ol 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6PFM 
_cell.length_a            144.106 
_cell.length_b            144.106 
_cell.length_c            171.064 
_cell.Z_PDB               36 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6PFM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C28 H28 F N O4' 
_chem_comp.formula_weight    461.525 
_chem_comp.id                OGJ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2S)-2-(4-{2-[3-(fluoromethyl)azetidin-1-yl]ethoxy}phenyl)-3-(3-hydroxyphenyl)-4-methyl-2H-1-benzopyran-6-ol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O35 C33 OGJ sing 237 n n 
C32 C33 OGJ doub 238 n y 
C32 C31 OGJ sing 239 n y 
C33 C34 OGJ sing 240 n y 
C31 C30 OGJ doub 241 n y 
C34 C29 OGJ doub 242 n y 
C30 C29 OGJ sing 243 n y 
C29 C3 OGJ sing 244 n n 
C1 C2 OGJ sing 245 n n 
C3 C2 OGJ doub 246 n n 
C3 C4 OGJ sing 247 n n 
C2 C8 OGJ sing 248 n n 
C4 C14 OGJ sing 249 n n 
C4 O6 OGJ sing 250 n n 
C14 C15 OGJ doub 251 n y 
C14 C19 OGJ sing 252 n y 
C8 C9 OGJ sing 253 n y 
C8 C7 OGJ doub 254 n y 
C15 C16 OGJ sing 255 n y 
C19 C18 OGJ doub 256 n y 
C9 C10 OGJ doub 257 n y 
C16 C17 OGJ doub 258 n y 
C18 C17 OGJ sing 259 n y 
O6 C7 OGJ sing 260 n n 
C17 O20 OGJ sing 261 n n 
C7 C12 OGJ sing 262 n y 
O20 C21 OGJ sing 263 n n 
C21 C22 OGJ sing 264 n n 
C10 O13 OGJ sing 265 n n 
C10 C11 OGJ sing 266 n y 
C26 N23 OGJ sing 267 n n 
C26 C25 OGJ sing 268 n n 
C22 N23 OGJ sing 269 n n 
C12 C11 OGJ doub 270 n y 
N23 C24 OGJ sing 271 n n 
C27 C25 OGJ sing 272 n n 
C27 F28 OGJ sing 273 n n 
C25 C24 OGJ sing 274 n n 
C4 H1 OGJ sing 275 n n 
C11 H2 OGJ sing 276 n n 
C9 H3 OGJ sing 277 n n 
C12 H4 OGJ sing 278 n n 
C1 H6 OGJ sing 279 n n 
C1 H7 OGJ sing 280 n n 
C1 H8 OGJ sing 281 n n 
O13 H10 OGJ sing 282 n n 
C15 H11 OGJ sing 283 n n 
C16 H12 OGJ sing 284 n n 
C18 H13 OGJ sing 285 n n 
C19 H14 OGJ sing 286 n n 
C21 H15 OGJ sing 287 n n 
C21 H16 OGJ sing 288 n n 
C22 H17 OGJ sing 289 n n 
C22 H18 OGJ sing 290 n n 
C24 H20 OGJ sing 291 n n 
C24 H21 OGJ sing 292 n n 
C25 H22 OGJ sing 293 n n 
C26 H23 OGJ sing 294 n n 
C26 H24 OGJ sing 295 n n 
C27 H25 OGJ sing 296 n n 
C27 H26 OGJ sing 297 n n 
C30 H27 OGJ sing 298 n n 
C31 H28 OGJ sing 299 n n 
C32 H29 OGJ sing 300 n n 
C34 H30 OGJ sing 301 n n 
O35 H31 OGJ sing 302 n n 
#
_atom_sites.entry_id                     6PFM 
_atom_sites.fract_transf_matrix[1][1]    0.006939 
_atom_sites.fract_transf_matrix[1][2]    0.004006 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008013 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005846 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 OGJ D 1 601 2 OGJ DRG . 
D 2 OGJ A 1 601 1 OGJ DRG . 
E 3 HOH D 1 701 6 HOH HOH . 
E 3 HOH D 2 702 17 HOH HOH . 
E 3 HOH D 3 703 4 HOH HOH . 
E 3 HOH D 4 704 2 HOH HOH . 
E 3 HOH D 5 705 12 HOH HOH . 
E 3 HOH D 6 706 16 HOH HOH . 
E 3 HOH D 7 707 14 HOH HOH . 
E 3 HOH D 8 708 10 HOH HOH . 
E 3 HOH D 9 709 9 HOH HOH . 
E 3 HOH D 10 710 23 HOH HOH . 
E 3 HOH D 11 711 7 HOH HOH . 
E 3 HOH D 12 712 13 HOH HOH . 
E 3 HOH D 13 713 11 HOH HOH . 
E 3 HOH D 14 714 1 HOH HOH . 
E 3 HOH D 15 715 8 HOH HOH . 
E 3 HOH D 16 716 21 HOH HOH . 
E 3 HOH D 17 717 20 HOH HOH . 
E 3 HOH D 18 718 18 HOH HOH . 
F 3 HOH A 1 701 3 HOH HOH . 
F 3 HOH A 2 702 22 HOH HOH . 
F 3 HOH A 3 703 5 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 OGJ . . . C 2 16.34 53.619 43.06 1 52.69 ? C4 OGJ 601 D 1 
HETATM 2 C C14 OGJ . . . C 2 17.767 53.38 42.687 1 50.03 ? C14 OGJ 601 D 1 
HETATM 3 C C11 OGJ . . . C 2 15.507 57.433 40.151 1 57.61 ? C11 OGJ 601 D 1 
HETATM 4 C C7 OGJ . . . C 2 15.582 55.617 41.746 1 55.59 ? C7 OGJ 601 D 1 
HETATM 5 C C8 OGJ . . . C 2 15.8 56.472 42.778 1 56.85 ? C8 OGJ 601 D 1 
HETATM 6 C C9 OGJ . . . C 2 15.879 57.872 42.484 1 56.77 ? C9 OGJ 601 D 1 
HETATM 7 C C10 OGJ . . . C 2 15.731 58.332 41.172 1 56.58 ? C10 OGJ 601 D 1 
HETATM 8 C C12 OGJ . . . C 2 15.43 56.082 40.423 1 56.59 ? C12 OGJ 601 D 1 
HETATM 9 C C3 OGJ . . . C 2 16.276 54.501 44.287 1 59.16 ? C3 OGJ 601 D 1 
HETATM 10 C C1 OGJ . . . C 2 16.003 56.808 45.384 1 58.35 ? C1 OGJ 601 D 1 
HETATM 11 C C2 OGJ . . . C 2 15.953 55.913 44.148 1 58.51 ? C2 OGJ 601 D 1 
HETATM 12 O O6 OGJ . . . C 2 15.486 54.16 41.943 1 54.56 ? O6 OGJ 601 D 1 
HETATM 13 O O13 OGJ . . . C 2 15.802 59.69 40.83 1 58.17 ? O13 OGJ 601 D 1 
HETATM 14 C C15 OGJ . . . C 2 18.779 54.317 42.893 1 49.72 ? C15 OGJ 601 D 1 
HETATM 15 C C16 OGJ . . . C 2 20.098 54.031 42.554 1 49.01 ? C16 OGJ 601 D 1 
HETATM 16 C C17 OGJ . . . C 2 20.441 52.804 42.004 1 51.16 ? C17 OGJ 601 D 1 
HETATM 17 C C18 OGJ . . . C 2 19.428 51.869 41.81 1 49.72 ? C18 OGJ 601 D 1 
HETATM 18 C C19 OGJ . . . C 2 18.11 52.156 42.151 1 48.77 ? C19 OGJ 601 D 1 
HETATM 19 O O20 OGJ . . . C 2 21.804 52.53 41.685 1 54.19 ? O20 OGJ 601 D 1 
HETATM 20 C C21 OGJ . . . C 2 22.107 51.788 40.528 1 60.97 ? C21 OGJ 601 D 1 
HETATM 21 C C22 OGJ . . . C 2 23.634 51.765 40.325 1 66.6 ? C22 OGJ 601 D 1 
HETATM 22 N N23 OGJ . . . C 2 24.001 52.612 39.704 1 72.98 ? N23 OGJ 601 D 1 
HETATM 23 C C24 OGJ . . . C 2 25.399 52.538 39.415 1 76.06 ? C24 OGJ 601 D 1 
HETATM 24 C C25 OGJ . . . C 2 25.591 53.827 39.969 1 77.85 ? C25 OGJ 601 D 1 
HETATM 25 C C26 OGJ . . . C 2 24.238 53.835 40.397 1 76.53 ? C26 OGJ 601 D 1 
HETATM 26 C C27 OGJ . . . C 2 26.575 53.859 41.129 1 83.65 ? C27 OGJ 601 D 1 
HETATM 27 F F28 OGJ . . . C 2 27.812 53.524 40.665 1 97.03 ? F28 OGJ 601 D 1 
HETATM 28 C C29 OGJ . . . C 2 16.619 53.769 45.592 1 68.91 ? C29 OGJ 601 D 1 
HETATM 29 C C30 OGJ . . . C 2 17.904 53.827 46.13 1 74.76 ? C30 OGJ 601 D 1 
HETATM 30 C C31 OGJ . . . C 2 18.215 53.118 47.286 1 73.56 ? C31 OGJ 601 D 1 
HETATM 31 C C32 OGJ . . . C 2 17.254 52.336 47.9 1 71.82 ? C32 OGJ 601 D 1 
HETATM 32 C C33 OGJ . . . C 2 15.983 52.272 47.356 1 73.33 ? C33 OGJ 601 D 1 
HETATM 33 C C34 OGJ . . . C 2 15.662 52.974 46.205 1 71.15 ? C34 OGJ 601 D 1 
HETATM 34 O O35 OGJ . . . C 2 15.012 51.492 47.985 1 81.14 ? O35 OGJ 601 D 1 
HETATM 35 H H1 OGJ . . . C 2 15.908 52.652 43.344 1 53.72 ? H1 OGJ 601 D 1 
HETATM 36 H H2 OGJ . . . C 2 15.392 57.787 39.133 1 56.96 ? H2 OGJ 601 D 1 
HETATM 37 H H3 OGJ . . . C 2 16.057 58.588 43.278 1 56.76 ? H3 OGJ 601 D 1 
HETATM 38 H H4 OGJ . . . C 2 15.255 55.377 39.618 1 56.61 ? H4 OGJ 601 D 1 
HETATM 39 H H6 OGJ . . . C 2 15.343 57.671 45.243 1 58.27 ? H6 OGJ 601 D 1 
HETATM 40 H H7 OGJ . . . C 2 17.03 57.157 45.54 1 58.37 ? H7 OGJ 601 D 1 
HETATM 41 H H8 OGJ . . . C 2 15.67 56.247 46.264 1 58.39 ? H8 OGJ 601 D 1 
HETATM 42 H H11 OGJ . . . C 2 18.553 55.287 43.32 1 49.74 ? H11 OGJ 601 D 1 
HETATM 43 H H12 OGJ . . . C 2 20.866 54.775 42.722 1 49.63 ? H12 OGJ 601 D 1 
HETATM 44 H H13 OGJ . . . C 2 19.659 50.896 41.389 1 49.93 ? H13 OGJ 601 D 1 
HETATM 45 H H14 OGJ . . . C 2 17.342 51.41 41.988 1 49.39 ? H14 OGJ 601 D 1 
HETATM 46 H H15 OGJ . . . C 2 21.615 52.245 39.662 1 60.49 ? H15 OGJ 601 D 1 
HETATM 47 H H16 OGJ . . . C 2 21.754 50.758 40.646 1 60.48 ? H16 OGJ 601 D 1 
HETATM 48 H H17 OGJ . . . C 2 23.87 50.826 39.808 1 66.71 ? H17 OGJ 601 D 1 
HETATM 49 H H18 OGJ . . . C 2 24.119 51.742 41.31 1 66.76 ? H18 OGJ 601 D 1 
HETATM 50 H H20 OGJ . . . C 2 25.934 51.757 39.972 1 75.72 ? H20 OGJ 601 D 1 
HETATM 51 H H21 OGJ . . . C 2 25.598 52.518 38.337 1 75.73 ? H21 OGJ 601 D 1 
HETATM 52 H H22 OGJ . . . C 2 25.814 54.562 39.192 1 77.87 ? H22 OGJ 601 D 1 
HETATM 53 H H23 OGJ . . . C 2 24.138 53.753 41.484 1 75.52 ? H23 OGJ 601 D 1 
HETATM 54 H H24 OGJ . . . C 2 23.665 54.666 39.973 1 75.53 ? H24 OGJ 601 D 1 
HETATM 55 H H25 OGJ . . . C 2 26.27 53.141 41.9 1 85.07 ? H25 OGJ 601 D 1 
HETATM 56 H H26 OGJ . . . C 2 26.61 54.868 41.554 1 84.88 ? H26 OGJ 601 D 1 
HETATM 57 H H27 OGJ . . . C 2 18.667 54.43 45.649 1 72.87 ? H27 OGJ 601 D 1 
HETATM 58 H H28 OGJ . . . C 2 19.211 53.184 47.709 1 72.92 ? H28 OGJ 601 D 1 
HETATM 59 H H29 OGJ . . . C 2 17.488 51.798 48.812 1 72.33 ? H29 OGJ 601 D 1 
HETATM 60 H H30 OGJ . . . C 2 14.665 52.908 45.783 1 71.07 ? H30 OGJ 601 D 1 
#
_model_server_stats.io_time_ms              23 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           330 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           60 
#