data_6PFM
#
_model_server_result.job_id            eg93y2ixUIIjmt_krHmfYA 
_model_server_result.datetime_utc      '2024-11-29 15:01:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6pfm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":601}' 
#
_entry.id    6PFM 
#
_exptl.entry_id    6PFM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              461.525 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2S)-2-(4-{2-[3-(fluoromethyl)azetidin-1-yl]ethoxy}phenyl)-3-(3-hydroxyphenyl)-4-methyl-2H-1-benzopyran-6-ol 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6PFM 
_cell.length_a            144.106 
_cell.length_b            144.106 
_cell.length_c            171.064 
_cell.Z_PDB               36 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6PFM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C28 H28 F N O4' 
_chem_comp.formula_weight    461.525 
_chem_comp.id                OGJ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2S)-2-(4-{2-[3-(fluoromethyl)azetidin-1-yl]ethoxy}phenyl)-3-(3-hydroxyphenyl)-4-methyl-2H-1-benzopyran-6-ol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O35 C33 OGJ sing 237 n n 
C32 C33 OGJ doub 238 n y 
C32 C31 OGJ sing 239 n y 
C33 C34 OGJ sing 240 n y 
C31 C30 OGJ doub 241 n y 
C34 C29 OGJ doub 242 n y 
C30 C29 OGJ sing 243 n y 
C29 C3 OGJ sing 244 n n 
C1 C2 OGJ sing 245 n n 
C3 C2 OGJ doub 246 n n 
C3 C4 OGJ sing 247 n n 
C2 C8 OGJ sing 248 n n 
C4 C14 OGJ sing 249 n n 
C4 O6 OGJ sing 250 n n 
C14 C15 OGJ doub 251 n y 
C14 C19 OGJ sing 252 n y 
C8 C9 OGJ sing 253 n y 
C8 C7 OGJ doub 254 n y 
C15 C16 OGJ sing 255 n y 
C19 C18 OGJ doub 256 n y 
C9 C10 OGJ doub 257 n y 
C16 C17 OGJ doub 258 n y 
C18 C17 OGJ sing 259 n y 
O6 C7 OGJ sing 260 n n 
C17 O20 OGJ sing 261 n n 
C7 C12 OGJ sing 262 n y 
O20 C21 OGJ sing 263 n n 
C21 C22 OGJ sing 264 n n 
C10 O13 OGJ sing 265 n n 
C10 C11 OGJ sing 266 n y 
C26 N23 OGJ sing 267 n n 
C26 C25 OGJ sing 268 n n 
C22 N23 OGJ sing 269 n n 
C12 C11 OGJ doub 270 n y 
N23 C24 OGJ sing 271 n n 
C27 C25 OGJ sing 272 n n 
C27 F28 OGJ sing 273 n n 
C25 C24 OGJ sing 274 n n 
C4 H1 OGJ sing 275 n n 
C11 H2 OGJ sing 276 n n 
C9 H3 OGJ sing 277 n n 
C12 H4 OGJ sing 278 n n 
C1 H6 OGJ sing 279 n n 
C1 H7 OGJ sing 280 n n 
C1 H8 OGJ sing 281 n n 
O13 H10 OGJ sing 282 n n 
C15 H11 OGJ sing 283 n n 
C16 H12 OGJ sing 284 n n 
C18 H13 OGJ sing 285 n n 
C19 H14 OGJ sing 286 n n 
C21 H15 OGJ sing 287 n n 
C21 H16 OGJ sing 288 n n 
C22 H17 OGJ sing 289 n n 
C22 H18 OGJ sing 290 n n 
C24 H20 OGJ sing 291 n n 
C24 H21 OGJ sing 292 n n 
C25 H22 OGJ sing 293 n n 
C26 H23 OGJ sing 294 n n 
C26 H24 OGJ sing 295 n n 
C27 H25 OGJ sing 296 n n 
C27 H26 OGJ sing 297 n n 
C30 H27 OGJ sing 298 n n 
C31 H28 OGJ sing 299 n n 
C32 H29 OGJ sing 300 n n 
C34 H30 OGJ sing 301 n n 
O35 H31 OGJ sing 302 n n 
#
_atom_sites.entry_id                     6PFM 
_atom_sites.fract_transf_matrix[1][1]    0.006939 
_atom_sites.fract_transf_matrix[1][2]    0.004006 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008013 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005846 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 OGJ D 1 601 2 OGJ DRG . 
D 2 OGJ A 1 601 1 OGJ DRG . 
E 3 HOH D 1 701 6 HOH HOH . 
E 3 HOH D 2 702 17 HOH HOH . 
E 3 HOH D 3 703 4 HOH HOH . 
E 3 HOH D 4 704 2 HOH HOH . 
E 3 HOH D 5 705 12 HOH HOH . 
E 3 HOH D 6 706 16 HOH HOH . 
E 3 HOH D 7 707 14 HOH HOH . 
E 3 HOH D 8 708 10 HOH HOH . 
E 3 HOH D 9 709 9 HOH HOH . 
E 3 HOH D 10 710 23 HOH HOH . 
E 3 HOH D 11 711 7 HOH HOH . 
E 3 HOH D 12 712 13 HOH HOH . 
E 3 HOH D 13 713 11 HOH HOH . 
E 3 HOH D 14 714 1 HOH HOH . 
E 3 HOH D 15 715 8 HOH HOH . 
E 3 HOH D 16 716 21 HOH HOH . 
E 3 HOH D 17 717 20 HOH HOH . 
E 3 HOH D 18 718 18 HOH HOH . 
F 3 HOH A 1 701 3 HOH HOH . 
F 3 HOH A 2 702 22 HOH HOH . 
F 3 HOH A 3 703 5 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 OGJ . . . D 2 34.157 54.673 70.154 1 77.64 ? C4 OGJ 601 A 1 
HETATM 2 C C14 OGJ . . . D 2 32.925 53.967 70.581 1 69.4 ? C14 OGJ 601 A 1 
HETATM 3 C C11 OGJ . . . D 2 33.786 58.289 73.458 1 92.91 ? C11 OGJ 601 A 1 
HETATM 4 C C7 OGJ . . . D 2 34.289 56.677 71.702 1 90.43 ? C7 OGJ 601 A 1 
HETATM 5 C C8 OGJ . . . D 2 33.883 57.539 70.728 1 91.72 ? C8 OGJ 601 A 1 
HETATM 6 C C9 OGJ . . . D 2 33.408 58.828 71.127 1 94.9 ? C9 OGJ 601 A 1 
HETATM 7 C C10 OGJ . . . D 2 33.371 59.185 72.483 1 94.5 ? C10 OGJ 601 A 1 
HETATM 8 C C12 OGJ . . . D 2 34.248 57.04 73.078 1 92.72 ? C12 OGJ 601 A 1 
HETATM 9 C C3 OGJ . . . D 2 33.838 55.658 69.057 1 84.64 ? C3 OGJ 601 A 1 
HETATM 10 C C1 OGJ . . . D 2 34.274 58.041 68.168 1 87.63 ? C1 OGJ 601 A 1 
HETATM 11 C C2 OGJ . . . D 2 33.94 57.089 69.314 1 88.58 ? C2 OGJ 601 A 1 
HETATM 12 O O6 OGJ . . . D 2 34.797 55.327 71.359 1 85.54 ? O6 OGJ 601 A 1 
HETATM 13 O O13 OGJ . . . D 2 32.902 60.443 72.892 1 98.17 ? O13 OGJ 601 A 1 
HETATM 14 C C15 OGJ . . . D 2 31.74 54.651 70.779 1 67.33 ? C15 OGJ 601 A 1 
HETATM 15 C C16 OGJ . . . D 2 30.606 53.964 71.18 1 65.67 ? C16 OGJ 601 A 1 
HETATM 16 C C17 OGJ . . . D 2 30.633 52.601 71.393 1 65.24 ? C17 OGJ 601 A 1 
HETATM 17 C C18 OGJ . . . D 2 31.821 51.91 71.191 1 64.59 ? C18 OGJ 601 A 1 
HETATM 18 C C19 OGJ . . . D 2 32.96 52.597 70.79 1 66.76 ? C19 OGJ 601 A 1 
HETATM 19 O O20 OGJ . . . D 2 29.422 52.013 71.815 1 70.56 ? O20 OGJ 601 A 1 
HETATM 20 C C21 OGJ . . . D 2 29.28 50.61 71.905 1 80.1 ? C21 OGJ 601 A 1 
HETATM 21 C C22 OGJ . . . D 2 28.233 50.306 72.99 1 89.48 ? C22 OGJ 601 A 1 
HETATM 22 N N23 OGJ . . . D 2 27.621 51.208 73.226 1 101.56 ? N23 OGJ 601 A 1 
HETATM 23 C C24 OGJ . . . D 2 26.833 51.12 74.416 1 107.31 ? C24 OGJ 601 A 1 
HETATM 24 C C25 OGJ . . . D 2 25.643 51.055 73.652 1 111.13 ? C25 OGJ 601 A 1 
HETATM 25 C C26 OGJ . . . D 2 26.408 51.35 72.486 1 109.65 ? C26 OGJ 601 A 1 
HETATM 26 C C27 OGJ . . . D 2 25.013 49.656 73.637 1 114.02 ? C27 OGJ 601 A 1 
HETATM 27 F F28 OGJ . . . D 2 24.217 49.461 74.729 1 111.35 ? F28 OGJ 601 A 1 
HETATM 28 C C29 OGJ . . . D 2 33.788 55.022 67.672 1 90.31 ? C29 OGJ 601 A 1 
HETATM 29 C C30 OGJ . . . D 2 32.564 54.798 67.063 1 94.3 ? C30 OGJ 601 A 1 
HETATM 30 C C31 OGJ . . . D 2 32.522 54.194 65.816 1 95.96 ? C31 OGJ 601 A 1 
HETATM 31 C C32 OGJ . . . D 2 33.699 53.798 65.194 1 96.13 ? C32 OGJ 601 A 1 
HETATM 32 C C33 OGJ . . . D 2 34.921 54.011 65.817 1 96.45 ? C33 OGJ 601 A 1 
HETATM 33 C C34 OGJ . . . D 2 34.966 54.62 67.06 1 93.84 ? C34 OGJ 601 A 1 
HETATM 34 O O35 OGJ . . . D 2 36.108 53.615 65.183 1 99.38 ? O35 OGJ 601 A 1 
HETATM 35 H H1 OGJ . . . D 2 34.866 53.937 69.758 1 78.68 ? H1 OGJ 601 A 1 
HETATM 36 H H2 OGJ . . . D 2 33.761 58.568 74.506 1 93.13 ? H2 OGJ 601 A 1 
HETATM 37 H H3 OGJ . . . D 2 33.068 59.537 70.38 1 93.84 ? H3 OGJ 601 A 1 
HETATM 38 H H4 OGJ . . . D 2 34.584 56.336 73.832 1 92.24 ? H4 OGJ 601 A 1 
HETATM 39 H H6 OGJ . . . D 2 33.803 59.013 68.344 1 87.53 ? H6 OGJ 601 A 1 
HETATM 40 H H7 OGJ . . . D 2 33.9 57.636 67.222 1 87.79 ? H7 OGJ 601 A 1 
HETATM 41 H H8 OGJ . . . D 2 35.361 58.165 68.104 1 87.6 ? H8 OGJ 601 A 1 
HETATM 42 H H11 OGJ . . . D 2 31.686 55.723 70.626 1 67.54 ? H11 OGJ 601 A 1 
HETATM 43 H H12 OGJ . . . D 2 29.684 54.509 71.341 1 66.04 ? H12 OGJ 601 A 1 
HETATM 44 H H13 OGJ . . . D 2 31.885 50.84 71.349 1 65.6 ? H13 OGJ 601 A 1 
HETATM 45 H H14 OGJ . . . D 2 33.885 52.051 70.636 1 66.98 ? H14 OGJ 601 A 1 
HETATM 46 H H15 OGJ . . . D 2 30.22 50.133 72.197 1 79.44 ? H15 OGJ 601 A 1 
HETATM 47 H H16 OGJ . . . D 2 28.943 50.209 70.942 1 79.72 ? H16 OGJ 601 A 1 
HETATM 48 H H17 OGJ . . . D 2 28.782 49.995 73.886 1 89.46 ? H17 OGJ 601 A 1 
HETATM 49 H H18 OGJ . . . D 2 27.625 49.459 72.654 1 89.99 ? H18 OGJ 601 A 1 
HETATM 50 H H20 OGJ . . . D 2 27 50.206 74.997 1 106.22 ? H20 OGJ 601 A 1 
HETATM 51 H H21 OGJ . . . D 2 26.882 52.037 75.014 1 106.3 ? H21 OGJ 601 A 1 
HETATM 52 H H22 OGJ . . . D 2 24.939 51.856 73.905 1 110.65 ? H22 OGJ 601 A 1 
HETATM 53 H H23 OGJ . . . D 2 26.274 50.61 71.688 1 107.94 ? H23 OGJ 601 A 1 
HETATM 54 H H24 OGJ . . . D 2 26.256 52.381 72.147 1 108.01 ? H24 OGJ 601 A 1 
HETATM 55 H H25 OGJ . . . D 2 25.796 48.89 73.634 1 112.56 ? H25 OGJ 601 A 1 
HETATM 56 H H26 OGJ . . . D 2 24.411 49.546 72.731 1 112.67 ? H26 OGJ 601 A 1 
HETATM 57 H H27 OGJ . . . D 2 31.646 55.105 67.552 1 93.47 ? H27 OGJ 601 A 1 
HETATM 58 H H28 OGJ . . . D 2 31.569 54.03 65.328 1 94.77 ? H28 OGJ 601 A 1 
HETATM 59 H H29 OGJ . . . D 2 33.664 53.33 64.215 1 95.87 ? H29 OGJ 601 A 1 
HETATM 60 H H30 OGJ . . . D 2 35.919 54.783 67.553 1 93.65 ? H30 OGJ 601 A 1 
#
_model_server_stats.io_time_ms              53 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           292 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           60 
#