data_6PGA
#
_model_server_result.job_id            4r8WpJ4ez8sUs4OpMjfhww 
_model_server_result.datetime_utc      '2024-11-22 05:27:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6pga 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
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_entry.id    6PGA 
#
_exptl.entry_id    6PGA 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              227.26 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'methyl {4-[5-(hydroxymethyl)-1H-imidazol-2-yl]butyl}carbamate' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6PGA 
_cell.length_a            46.782 
_cell.length_b            64.991 
_cell.length_c            97.386 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 6PGA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C10 H17 N3 O3' 
_chem_comp.formula_weight    227.26 
_chem_comp.id                OGM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'methyl {4-[5-(hydroxymethyl)-1H-imidazol-2-yl]butyl}carbamate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N15 C14 OGM sing 218 n y 
N15 C09 OGM doub 219 n y 
C07 C06 OGM sing 220 n n 
C07 C08 OGM sing 221 n n 
C14 C11 OGM doub 222 n y 
C06 C05 OGM sing 223 n n 
C09 C08 OGM sing 224 n n 
C09 N10 OGM sing 225 n y 
N04 C05 OGM sing 226 n n 
N04 C03 OGM sing 227 n n 
O13 C12 OGM sing 228 n n 
C11 N10 OGM sing 229 n y 
C11 C12 OGM sing 230 n n 
O02 C03 OGM sing 231 n n 
O02 C01 OGM sing 232 n n 
C03 O16 OGM doub 233 n n 
C01 H1 OGM sing 234 n n 
C01 H2 OGM sing 235 n n 
C01 H3 OGM sing 236 n n 
N04 H4 OGM sing 237 n n 
C05 H5 OGM sing 238 n n 
C05 H6 OGM sing 239 n n 
C06 H7 OGM sing 240 n n 
C06 H8 OGM sing 241 n n 
C07 H9 OGM sing 242 n n 
C07 H10 OGM sing 243 n n 
C08 H11 OGM sing 244 n n 
C08 H12 OGM sing 245 n n 
N10 H13 OGM sing 246 n n 
C12 H14 OGM sing 247 n n 
C12 H15 OGM sing 248 n n 
O13 H16 OGM sing 249 n n 
C14 H17 OGM sing 250 n n 
#
_atom_sites.entry_id                     6PGA 
_atom_sites.fract_transf_matrix[1][1]    0.021376 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015387 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010268 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 OGM A 1 401 1 OGM LIG . 
C 3 SO4 A 1 402 1 SO4 SO4 . 
D 4 HOH A 1 501 28 HOH HOH . 
D 4 HOH A 2 502 47 HOH HOH . 
D 4 HOH A 3 503 40 HOH HOH . 
D 4 HOH A 4 504 36 HOH HOH . 
D 4 HOH A 5 505 1 HOH HOH . 
D 4 HOH A 6 506 58 HOH HOH . 
D 4 HOH A 7 507 16 HOH HOH . 
D 4 HOH A 8 508 10 HOH HOH . 
D 4 HOH A 9 509 48 HOH HOH . 
D 4 HOH A 10 510 37 HOH HOH . 
D 4 HOH A 11 511 41 HOH HOH . 
D 4 HOH A 12 512 13 HOH HOH . 
D 4 HOH A 13 513 57 HOH HOH . 
D 4 HOH A 14 514 2 HOH HOH . 
D 4 HOH A 15 515 15 HOH HOH . 
D 4 HOH A 16 516 29 HOH HOH . 
D 4 HOH A 17 517 33 HOH HOH . 
D 4 HOH A 18 518 32 HOH HOH . 
D 4 HOH A 19 519 61 HOH HOH . 
D 4 HOH A 20 520 73 HOH HOH . 
D 4 HOH A 21 521 27 HOH HOH . 
D 4 HOH A 22 522 6 HOH HOH . 
D 4 HOH A 23 523 14 HOH HOH . 
D 4 HOH A 24 524 70 HOH HOH . 
D 4 HOH A 25 525 20 HOH HOH . 
D 4 HOH A 26 526 18 HOH HOH . 
D 4 HOH A 27 527 65 HOH HOH . 
D 4 HOH A 28 528 7 HOH HOH . 
D 4 HOH A 29 529 35 HOH HOH . 
D 4 HOH A 30 530 64 HOH HOH . 
D 4 HOH A 31 531 46 HOH HOH . 
D 4 HOH A 32 532 68 HOH HOH . 
D 4 HOH A 33 533 8 HOH HOH . 
D 4 HOH A 34 534 3 HOH HOH . 
D 4 HOH A 35 535 9 HOH HOH . 
D 4 HOH A 36 536 23 HOH HOH . 
D 4 HOH A 37 537 39 HOH HOH . 
D 4 HOH A 38 538 72 HOH HOH . 
D 4 HOH A 39 539 26 HOH HOH . 
D 4 HOH A 40 540 42 HOH HOH . 
D 4 HOH A 41 541 11 HOH HOH . 
D 4 HOH A 42 542 49 HOH HOH . 
D 4 HOH A 43 543 54 HOH HOH . 
D 4 HOH A 44 544 12 HOH HOH . 
D 4 HOH A 45 545 38 HOH HOH . 
D 4 HOH A 46 546 24 HOH HOH . 
D 4 HOH A 47 547 34 HOH HOH . 
D 4 HOH A 48 548 71 HOH HOH . 
D 4 HOH A 49 549 5 HOH HOH . 
D 4 HOH A 50 550 60 HOH HOH . 
D 4 HOH A 51 551 43 HOH HOH . 
D 4 HOH A 52 552 45 HOH HOH . 
D 4 HOH A 53 553 4 HOH HOH . 
D 4 HOH A 54 554 30 HOH HOH . 
D 4 HOH A 55 555 31 HOH HOH . 
D 4 HOH A 56 556 22 HOH HOH . 
D 4 HOH A 57 557 17 HOH HOH . 
D 4 HOH A 58 558 19 HOH HOH . 
D 4 HOH A 59 559 25 HOH HOH . 
D 4 HOH A 60 560 53 HOH HOH . 
D 4 HOH A 61 561 74 HOH HOH . 
D 4 HOH A 62 562 56 HOH HOH . 
D 4 HOH A 63 563 55 HOH HOH . 
D 4 HOH A 64 564 52 HOH HOH . 
D 4 HOH A 65 565 44 HOH HOH . 
D 4 HOH A 66 566 67 HOH HOH . 
D 4 HOH A 67 567 66 HOH HOH . 
D 4 HOH A 68 568 50 HOH HOH . 
D 4 HOH A 69 569 69 HOH HOH . 
D 4 HOH A 70 570 63 HOH HOH . 
D 4 HOH A 71 571 51 HOH HOH . 
D 4 HOH A 72 572 21 HOH HOH . 
D 4 HOH A 73 573 59 HOH HOH . 
D 4 HOH A 74 574 62 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C01 OGM . . . B 2 3.289 76.582 6.58 1 25.32 ? C01 OGM 401 A 1 
HETATM 2 O O02 OGM . . . B 2 4.013 76.096 5.484 1 25.6 ? O02 OGM 401 A 1 
HETATM 3 C C03 OGM . . . B 2 4.827 74.969 5.773 1 25.25 ? C03 OGM 401 A 1 
HETATM 4 N N04 OGM . . . B 2 5.942 74.667 4.893 1 25.01 ? N04 OGM 401 A 1 
HETATM 5 C C05 OGM . . . B 2 6.709 73.46 5.038 1 24.65 ? C05 OGM 401 A 1 
HETATM 6 C C06 OGM . . . B 2 6.493 72.575 3.823 1 23.98 ? C06 OGM 401 A 1 
HETATM 7 C C07 OGM . . . B 2 5.081 71.991 3.747 1 23.78 ? C07 OGM 401 A 1 
HETATM 8 C C08 OGM . . . B 2 4.823 70.892 4.78 1 22.94 ? C08 OGM 401 A 1 
HETATM 9 C C09 OGM . . . B 2 3.465 70.225 4.623 1 23.15 ? C09 OGM 401 A 1 
HETATM 10 N N10 OGM . . . B 2 2.676 69.809 5.632 1 24.43 ? N10 OGM 401 A 1 
HETATM 11 C C11 OGM . . . B 2 1.574 69.298 5.123 1 22.91 ? C11 OGM 401 A 1 
HETATM 12 C C12 OGM . . . B 2 0.439 68.714 5.939 1 22.76 ? C12 OGM 401 A 1 
HETATM 13 O O13 OGM . . . B 2 -0.638 68.343 5.101 1 22.28 ? O13 OGM 401 A 1 
HETATM 14 C C14 OGM . . . B 2 1.671 69.383 3.767 1 22.63 ? C14 OGM 401 A 1 
HETATM 15 N N15 OGM . . . B 2 2.818 69.942 3.484 1 23.24 ? N15 OGM 401 A 1 
HETATM 16 O O16 OGM . . . B 2 4.601 74.278 6.707 1 23.96 ? O16 OGM 401 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           16 
#