data_6PGC # _model_server_result.job_id Lxj87eTkewAcoLi712DZ1g _model_server_result.datetime_utc '2025-01-12 11:48:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6pgc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 6PGC # _exptl.entry_id 6PGC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 317.383 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'methyl benzyl{4-[4-(hydroxymethyl)-1H-imidazol-2-yl]butyl}carbamate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6PGC _cell.length_a 46.716 _cell.length_b 65.285 _cell.length_c 97.173 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PGC _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H23 N3 O3' _chem_comp.formula_weight 317.383 _chem_comp.id OJJ _chem_comp.mon_nstd_flag . _chem_comp.name 'methyl benzyl{4-[4-(hydroxymethyl)-1H-imidazol-2-yl]butyl}carbamate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O15 C12 OJJ doub 218 n n C14 O13 OJJ sing 219 n n C12 O13 OJJ sing 220 n n C12 N11 OJJ sing 221 n n C02 O01 OJJ sing 222 n n C02 C03 OJJ sing 223 n n N23 C03 OJJ sing 224 n y N23 C06 OJJ doub 225 n y C10 N11 OJJ sing 226 n n C10 C09 OJJ sing 227 n n C21 C22 OJJ doub 228 n y C21 C20 OJJ sing 229 n y N11 C16 OJJ sing 230 n n C22 C17 OJJ sing 231 n y C03 C04 OJJ doub 232 n y C07 C06 OJJ sing 233 n n C07 C08 OJJ sing 234 n n C06 N05 OJJ sing 235 n y C20 C19 OJJ doub 236 n y C17 C16 OJJ sing 237 n n C17 C18 OJJ doub 238 n y C09 C08 OJJ sing 239 n n C04 N05 OJJ sing 240 n y C19 C18 OJJ sing 241 n y O01 H1 OJJ sing 242 n n C02 H2 OJJ sing 243 n n C02 H3 OJJ sing 244 n n C04 H4 OJJ sing 245 n n N05 H5 OJJ sing 246 n n C07 H6 OJJ sing 247 n n C07 H7 OJJ sing 248 n n C08 H8 OJJ sing 249 n n C08 H9 OJJ sing 250 n n C09 H10 OJJ sing 251 n n C09 H11 OJJ sing 252 n n C10 H12 OJJ sing 253 n n C10 H13 OJJ sing 254 n n C14 H14 OJJ sing 255 n n C14 H15 OJJ sing 256 n n C14 H16 OJJ sing 257 n n C16 H17 OJJ sing 258 n n C16 H18 OJJ sing 259 n n C18 H19 OJJ sing 260 n n C19 H20 OJJ sing 261 n n C20 H21 OJJ sing 262 n n C21 H22 OJJ sing 263 n n C22 H23 OJJ sing 264 n n # _atom_sites.entry_id 6PGC _atom_sites.fract_transf_matrix[1][1] 0.021406 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015317 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010291 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 401 1 SO4 SO4 . C 2 SO4 A 1 402 2 SO4 SO4 . D 3 OJJ A 1 403 1 OJJ 969 . E 4 HOH A 1 501 58 HOH HOH . E 4 HOH A 2 502 60 HOH HOH . E 4 HOH A 3 503 168 HOH HOH . E 4 HOH A 4 504 200 HOH HOH . E 4 HOH A 5 505 184 HOH HOH . E 4 HOH A 6 506 65 HOH HOH . E 4 HOH A 7 507 131 HOH HOH . E 4 HOH A 8 508 146 HOH HOH . E 4 HOH A 9 509 94 HOH HOH . E 4 HOH A 10 510 55 HOH HOH . E 4 HOH A 11 511 124 HOH HOH . E 4 HOH A 12 512 13 HOH HOH . E 4 HOH A 13 513 111 HOH HOH . E 4 HOH A 14 514 82 HOH HOH . E 4 HOH A 15 515 37 HOH HOH . E 4 HOH A 16 516 28 HOH HOH . E 4 HOH A 17 517 42 HOH HOH . E 4 HOH A 18 518 80 HOH HOH . E 4 HOH A 19 519 158 HOH HOH . E 4 HOH A 20 520 68 HOH HOH . E 4 HOH A 21 521 17 HOH HOH . E 4 HOH A 22 522 108 HOH HOH . E 4 HOH A 23 523 25 HOH HOH . E 4 HOH A 24 524 77 HOH HOH . E 4 HOH A 25 525 27 HOH HOH . E 4 HOH A 26 526 9 HOH HOH . E 4 HOH A 27 527 46 HOH HOH . E 4 HOH A 28 528 190 HOH HOH . E 4 HOH A 29 529 14 HOH HOH . E 4 HOH A 30 530 120 HOH HOH . E 4 HOH A 31 531 10 HOH HOH . E 4 HOH A 32 532 88 HOH HOH . E 4 HOH A 33 533 161 HOH HOH . E 4 HOH A 34 534 125 HOH HOH . E 4 HOH A 35 535 84 HOH HOH . E 4 HOH A 36 536 98 HOH HOH . E 4 HOH A 37 537 118 HOH HOH . E 4 HOH A 38 538 2 HOH HOH . E 4 HOH A 39 539 110 HOH HOH . E 4 HOH A 40 540 57 HOH HOH . E 4 HOH A 41 541 29 HOH HOH . E 4 HOH A 42 542 75 HOH HOH . E 4 HOH A 43 543 49 HOH HOH . E 4 HOH A 44 544 73 HOH HOH . E 4 HOH A 45 545 133 HOH HOH . E 4 HOH A 46 546 31 HOH HOH . E 4 HOH A 47 547 169 HOH HOH . E 4 HOH A 48 548 85 HOH HOH . E 4 HOH A 49 549 32 HOH HOH . E 4 HOH A 50 550 21 HOH HOH . E 4 HOH A 51 551 45 HOH HOH . E 4 HOH A 52 552 96 HOH HOH . E 4 HOH A 53 553 119 HOH HOH . E 4 HOH A 54 554 129 HOH HOH . E 4 HOH A 55 555 122 HOH HOH . E 4 HOH A 56 556 30 HOH HOH . E 4 HOH A 57 557 53 HOH HOH . E 4 HOH A 58 558 5 HOH HOH . E 4 HOH A 59 559 117 HOH HOH . E 4 HOH A 60 560 20 HOH HOH . E 4 HOH A 61 561 41 HOH HOH . E 4 HOH A 62 562 23 HOH HOH . E 4 HOH A 63 563 4 HOH HOH . E 4 HOH A 64 564 156 HOH HOH . E 4 HOH A 65 565 18 HOH HOH . E 4 HOH A 66 566 12 HOH HOH . E 4 HOH A 67 567 115 HOH HOH . E 4 HOH A 68 568 152 HOH HOH . E 4 HOH A 69 569 155 HOH HOH . E 4 HOH A 70 570 36 HOH HOH . E 4 HOH A 71 571 86 HOH HOH . E 4 HOH A 72 572 50 HOH HOH . E 4 HOH A 73 573 44 HOH HOH . E 4 HOH A 74 574 59 HOH HOH . E 4 HOH A 75 575 104 HOH HOH . E 4 HOH A 76 576 95 HOH HOH . E 4 HOH A 77 577 198 HOH HOH . E 4 HOH A 78 578 135 HOH HOH . E 4 HOH A 79 579 16 HOH HOH . E 4 HOH A 80 580 130 HOH HOH . E 4 HOH A 81 581 121 HOH HOH . E 4 HOH A 82 582 109 HOH HOH . E 4 HOH A 83 583 11 HOH HOH . E 4 HOH A 84 584 89 HOH HOH . E 4 HOH A 85 585 202 HOH HOH . E 4 HOH A 86 586 39 HOH HOH . E 4 HOH A 87 587 15 HOH HOH . E 4 HOH A 88 588 148 HOH HOH . E 4 HOH A 89 589 99 HOH HOH . E 4 HOH A 90 590 67 HOH HOH . E 4 HOH A 91 591 54 HOH HOH . E 4 HOH A 92 592 102 HOH HOH . E 4 HOH A 93 593 8 HOH HOH . E 4 HOH A 94 594 199 HOH HOH . E 4 HOH A 95 595 7 HOH HOH . E 4 HOH A 96 596 63 HOH HOH . E 4 HOH A 97 597 132 HOH HOH . E 4 HOH A 98 598 52 HOH HOH . E 4 HOH A 99 599 24 HOH HOH . E 4 HOH A 100 600 51 HOH HOH . E 4 HOH A 101 601 1 HOH HOH . E 4 HOH A 102 602 126 HOH HOH . E 4 HOH A 103 603 78 HOH HOH . E 4 HOH A 104 604 160 HOH HOH . E 4 HOH A 105 605 189 HOH HOH . E 4 HOH A 106 606 74 HOH HOH . E 4 HOH A 107 607 163 HOH HOH . E 4 HOH A 108 608 101 HOH HOH . E 4 HOH A 109 609 40 HOH HOH . E 4 HOH A 110 610 81 HOH HOH . E 4 HOH A 111 611 43 HOH HOH . E 4 HOH A 112 612 178 HOH HOH . E 4 HOH A 113 613 106 HOH HOH . E 4 HOH A 114 614 150 HOH HOH . E 4 HOH A 115 615 64 HOH HOH . E 4 HOH A 116 616 62 HOH HOH . E 4 HOH A 117 617 71 HOH HOH . E 4 HOH A 118 618 38 HOH HOH . E 4 HOH A 119 619 151 HOH HOH . E 4 HOH A 120 620 76 HOH HOH . E 4 HOH A 121 621 34 HOH HOH . E 4 HOH A 122 622 6 HOH HOH . E 4 HOH A 123 623 26 HOH HOH . E 4 HOH A 124 624 90 HOH HOH . E 4 HOH A 125 625 3 HOH HOH . E 4 HOH A 126 626 154 HOH HOH . E 4 HOH A 127 627 187 HOH HOH . E 4 HOH A 128 628 103 HOH HOH . E 4 HOH A 129 629 91 HOH HOH . E 4 HOH A 130 630 153 HOH HOH . E 4 HOH A 131 631 47 HOH HOH . E 4 HOH A 132 632 56 HOH HOH . E 4 HOH A 133 633 164 HOH HOH . E 4 HOH A 134 634 147 HOH HOH . E 4 HOH A 135 635 22 HOH HOH . E 4 HOH A 136 636 61 HOH HOH . E 4 HOH A 137 637 113 HOH HOH . E 4 HOH A 138 638 79 HOH HOH . E 4 HOH A 139 639 66 HOH HOH . E 4 HOH A 140 640 83 HOH HOH . E 4 HOH A 141 641 35 HOH HOH . E 4 HOH A 142 642 165 HOH HOH . E 4 HOH A 143 643 171 HOH HOH . E 4 HOH A 144 644 116 HOH HOH . E 4 HOH A 145 645 105 HOH HOH . E 4 HOH A 146 646 33 HOH HOH . E 4 HOH A 147 647 127 HOH HOH . E 4 HOH A 148 648 107 HOH HOH . E 4 HOH A 149 649 186 HOH HOH . E 4 HOH A 150 650 19 HOH HOH . E 4 HOH A 151 651 149 HOH HOH . E 4 HOH A 152 652 134 HOH HOH . E 4 HOH A 153 653 100 HOH HOH . E 4 HOH A 154 654 162 HOH HOH . E 4 HOH A 155 655 92 HOH HOH . E 4 HOH A 156 656 172 HOH HOH . E 4 HOH A 157 657 140 HOH HOH . E 4 HOH A 158 658 93 HOH HOH . E 4 HOH A 159 659 69 HOH HOH . E 4 HOH A 160 660 175 HOH HOH . E 4 HOH A 161 661 157 HOH HOH . E 4 HOH A 162 662 181 HOH HOH . E 4 HOH A 163 663 72 HOH HOH . E 4 HOH A 164 664 195 HOH HOH . E 4 HOH A 165 665 177 HOH HOH . E 4 HOH A 166 666 183 HOH HOH . E 4 HOH A 167 667 87 HOH HOH . E 4 HOH A 168 668 201 HOH HOH . E 4 HOH A 169 669 142 HOH HOH . E 4 HOH A 170 670 196 HOH HOH . E 4 HOH A 171 671 166 HOH HOH . E 4 HOH A 172 672 48 HOH HOH . E 4 HOH A 173 673 114 HOH HOH . E 4 HOH A 174 674 159 HOH HOH . E 4 HOH A 175 675 138 HOH HOH . E 4 HOH A 176 676 194 HOH HOH . E 4 HOH A 177 677 70 HOH HOH . E 4 HOH A 178 678 167 HOH HOH . E 4 HOH A 179 679 173 HOH HOH . E 4 HOH A 180 680 141 HOH HOH . E 4 HOH A 181 681 123 HOH HOH . E 4 HOH A 182 682 112 HOH HOH . E 4 HOH A 183 683 174 HOH HOH . E 4 HOH A 184 684 128 HOH HOH . E 4 HOH A 185 685 145 HOH HOH . E 4 HOH A 186 686 191 HOH HOH . E 4 HOH A 187 687 97 HOH HOH . E 4 HOH A 188 688 182 HOH HOH . E 4 HOH A 189 689 188 HOH HOH . E 4 HOH A 190 690 139 HOH HOH . E 4 HOH A 191 691 136 HOH HOH . E 4 HOH A 192 692 192 HOH HOH . E 4 HOH A 193 693 185 HOH HOH . E 4 HOH A 194 694 197 HOH HOH . E 4 HOH A 195 695 176 HOH HOH . E 4 HOH A 196 696 180 HOH HOH . E 4 HOH A 197 697 170 HOH HOH . E 4 HOH A 198 698 137 HOH HOH . E 4 HOH A 199 699 143 HOH HOH . E 4 HOH A 200 700 144 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 OJJ . . . D 3 24.129 3.464 -5.034 1 17.21 ? O01 OJJ 403 A 1 HETATM 2 C C02 OJJ . . . D 3 23.053 3.933 -5.815 1 16.65 ? C02 OJJ 403 A 1 HETATM 3 C C03 OJJ . . . D 3 21.876 4.404 -4.963 1 17.96 ? C03 OJJ 403 A 1 HETATM 4 C C04 OJJ . . . D 3 21.709 4.42 -3.599 1 17.74 ? C04 OJJ 403 A 1 HETATM 5 N N05 OJJ . . . D 3 20.512 4.97 -3.359 1 18.32 ? N05 OJJ 403 A 1 HETATM 6 C C06 OJJ . . . D 3 19.945 5.277 -4.527 1 18.75 ? C06 OJJ 403 A 1 HETATM 7 C C07 OJJ . . . D 3 18.574 5.888 -4.77 1 20.61 ? C07 OJJ 403 A 1 HETATM 8 C C08 OJJ . . . D 3 18.164 6.926 -3.711 1 22.23 ? C08 OJJ 403 A 1 HETATM 9 C C09 OJJ . . . D 3 16.82 7.598 -4.011 1 23.38 ? C09 OJJ 403 A 1 HETATM 10 C C10 OJJ . . . D 3 16.808 8.476 -5.282 1 26.07 ? C10 OJJ 403 A 1 HETATM 11 N N11 OJJ . . . D 3 17.564 9.706 -5.104 1 28.15 ? N11 OJJ 403 A 1 HETATM 12 C C12 OJJ . . . D 3 18.742 9.99 -5.915 1 27.61 ? C12 OJJ 403 A 1 HETATM 13 O O13 OJJ . . . D 3 19.577 11.059 -5.588 1 26.6 ? O13 OJJ 403 A 1 HETATM 14 C C14 OJJ . . . D 3 20.273 11.613 -6.678 1 24.6 ? C14 OJJ 403 A 1 HETATM 15 O O15 OJJ . . . D 3 19.031 9.353 -6.854 1 24.58 ? O15 OJJ 403 A 1 HETATM 16 C C16 OJJ . . . D 3 17.165 10.641 -4.041 1 35.08 ? C16 OJJ 403 A 1 HETATM 17 C C17 OJJ . . . D 3 15.709 11.123 -4.137 1 43.09 ? C17 OJJ 403 A 1 HETATM 18 C C18 OJJ . . . D 3 14.704 10.583 -3.3 1 46.18 ? C18 OJJ 403 A 1 HETATM 19 C C19 OJJ . . . D 3 13.387 11.044 -3.383 1 48.26 ? C19 OJJ 403 A 1 HETATM 20 C C20 OJJ . . . D 3 13.086 12.057 -4.3 1 49.69 ? C20 OJJ 403 A 1 HETATM 21 C C21 OJJ . . . D 3 14.085 12.601 -5.129 1 48.41 ? C21 OJJ 403 A 1 HETATM 22 C C22 OJJ . . . D 3 15.392 12.142 -5.046 1 44.7 ? C22 OJJ 403 A 1 HETATM 23 N N23 OJJ . . . D 3 20.779 4.918 -5.512 1 17.55 ? N23 OJJ 403 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 23 #