data_6PGY
#
_model_server_result.job_id            Y09k-_FbvlXAdVkvSMjMGA 
_model_server_result.datetime_utc      '2024-11-23 16:58:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6pgy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":204}' 
#
_entry.id    6PGY 
#
_exptl.entry_id    6PGY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              154.251 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-HYDROXYETHYL DISULFIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6PGY 
_cell.length_a            61.02 
_cell.length_b            61.02 
_cell.length_c            96.481 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6PGY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             65 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              65 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            D 
_struct_conn.ptnr2_label_atom_id            S1 
_struct_conn.ptnr2_label_comp_id            MTN 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             MTN 
_struct_conn.ptnr2_auth_seq_id              203 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.011 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C4 H10 O2 S2' 
_chem_comp.formula_weight    154.251 
_chem_comp.id                HED 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-HYDROXYETHYL DISULFIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 HED sing 129 n n 
C1 C2 HED sing 130 n n 
C1 H11 HED sing 131 n n 
C1 H12 HED sing 132 n n 
O1 HO1 HED sing 133 n n 
C2 S3 HED sing 134 n n 
C2 H21 HED sing 135 n n 
C2 H22 HED sing 136 n n 
S3 S4 HED sing 137 n n 
S4 C5 HED sing 138 n n 
C5 C6 HED sing 139 n n 
C5 H51 HED sing 140 n n 
C5 H52 HED sing 141 n n 
C6 O6 HED sing 142 n n 
C6 H61 HED sing 143 n n 
C6 H62 HED sing 144 n n 
O6 HO6 HED sing 145 n n 
#
_atom_sites.entry_id                     6PGY 
_atom_sites.fract_transf_matrix[1][1]    0.016388 
_atom_sites.fract_transf_matrix[1][2]    0.009462 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018923 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010365 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CL A 1 201 173 CL CL . 
C 2 CL A 1 202 178 CL CL . 
D 3 MTN A 1 203 300 MTN MTN . 
E 4 HED A 1 204 304 HED HED . 
F 5 HOH A 1 301 80 HOH HOH . 
F 5 HOH A 2 302 67 HOH HOH . 
F 5 HOH A 3 303 31 HOH HOH . 
F 5 HOH A 4 304 92 HOH HOH . 
F 5 HOH A 5 305 48 HOH HOH . 
F 5 HOH A 6 306 33 HOH HOH . 
F 5 HOH A 7 307 55 HOH HOH . 
F 5 HOH A 8 308 52 HOH HOH . 
F 5 HOH A 9 309 37 HOH HOH . 
F 5 HOH A 10 310 44 HOH HOH . 
F 5 HOH A 11 311 86 HOH HOH . 
F 5 HOH A 12 312 47 HOH HOH . 
F 5 HOH A 13 313 8 HOH HOH . 
F 5 HOH A 14 314 94 HOH HOH . 
F 5 HOH A 15 315 60 HOH HOH . 
F 5 HOH A 16 316 41 HOH HOH . 
F 5 HOH A 17 317 93 HOH HOH . 
F 5 HOH A 18 318 3 HOH HOH . 
F 5 HOH A 19 319 24 HOH HOH . 
F 5 HOH A 20 320 39 HOH HOH . 
F 5 HOH A 21 321 9 HOH HOH . 
F 5 HOH A 22 322 14 HOH HOH . 
F 5 HOH A 23 323 28 HOH HOH . 
F 5 HOH A 24 324 26 HOH HOH . 
F 5 HOH A 25 325 71 HOH HOH . 
F 5 HOH A 26 326 21 HOH HOH . 
F 5 HOH A 27 327 4 HOH HOH . 
F 5 HOH A 28 328 32 HOH HOH . 
F 5 HOH A 29 329 13 HOH HOH . 
F 5 HOH A 30 330 53 HOH HOH . 
F 5 HOH A 31 331 1 HOH HOH . 
F 5 HOH A 32 332 5 HOH HOH . 
F 5 HOH A 33 333 61 HOH HOH . 
F 5 HOH A 34 334 2 HOH HOH . 
F 5 HOH A 35 335 20 HOH HOH . 
F 5 HOH A 36 336 27 HOH HOH . 
F 5 HOH A 37 337 57 HOH HOH . 
F 5 HOH A 38 338 34 HOH HOH . 
F 5 HOH A 39 339 68 HOH HOH . 
F 5 HOH A 40 340 15 HOH HOH . 
F 5 HOH A 41 341 7 HOH HOH . 
F 5 HOH A 42 342 11 HOH HOH . 
F 5 HOH A 43 343 74 HOH HOH . 
F 5 HOH A 44 344 29 HOH HOH . 
F 5 HOH A 45 345 65 HOH HOH . 
F 5 HOH A 46 346 25 HOH HOH . 
F 5 HOH A 47 347 49 HOH HOH . 
F 5 HOH A 48 348 45 HOH HOH . 
F 5 HOH A 49 349 87 HOH HOH . 
F 5 HOH A 50 350 30 HOH HOH . 
F 5 HOH A 51 351 17 HOH HOH . 
F 5 HOH A 52 352 70 HOH HOH . 
F 5 HOH A 53 353 18 HOH HOH . 
F 5 HOH A 54 354 63 HOH HOH . 
F 5 HOH A 55 355 96 HOH HOH . 
F 5 HOH A 56 356 42 HOH HOH . 
F 5 HOH A 57 357 16 HOH HOH . 
F 5 HOH A 58 358 85 HOH HOH . 
F 5 HOH A 59 359 12 HOH HOH . 
F 5 HOH A 60 360 50 HOH HOH . 
F 5 HOH A 61 361 76 HOH HOH . 
F 5 HOH A 62 362 82 HOH HOH . 
F 5 HOH A 63 363 36 HOH HOH . 
F 5 HOH A 64 364 75 HOH HOH . 
F 5 HOH A 65 365 66 HOH HOH . 
F 5 HOH A 66 366 35 HOH HOH . 
F 5 HOH A 67 367 81 HOH HOH . 
F 5 HOH A 68 368 10 HOH HOH . 
F 5 HOH A 69 369 84 HOH HOH . 
F 5 HOH A 70 370 91 HOH HOH . 
F 5 HOH A 71 371 62 HOH HOH . 
F 5 HOH A 72 372 22 HOH HOH . 
F 5 HOH A 73 373 54 HOH HOH . 
F 5 HOH A 74 374 64 HOH HOH . 
F 5 HOH A 75 375 46 HOH HOH . 
F 5 HOH A 76 376 95 HOH HOH . 
F 5 HOH A 77 377 23 HOH HOH . 
F 5 HOH A 78 378 19 HOH HOH . 
F 5 HOH A 79 379 56 HOH HOH . 
F 5 HOH A 80 380 38 HOH HOH . 
F 5 HOH A 81 381 58 HOH HOH . 
F 5 HOH A 82 382 40 HOH HOH . 
F 5 HOH A 83 383 73 HOH HOH . 
F 5 HOH A 84 384 79 HOH HOH . 
F 5 HOH A 85 385 83 HOH HOH . 
F 5 HOH A 86 386 78 HOH HOH . 
F 5 HOH A 87 387 90 HOH HOH . 
F 5 HOH A 88 388 72 HOH HOH . 
F 5 HOH A 89 389 69 HOH HOH . 
F 5 HOH A 90 390 43 HOH HOH . 
F 5 HOH A 91 391 77 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 HED . . . E 4 -29.127 -1.412 14.942 1 39.27 ? C1 HED 204 A 1 
HETATM 2 O O1 HED . . . E 4 -30.528 -1.375 14.803 1 48.37 ? O1 HED 204 A 1 
HETATM 3 C C2 HED . . . E 4 -28.493 -0.486 13.918 1 34.34 ? C2 HED 204 A 1 
HETATM 4 S S3 HED . . . E 4 -27.125 -1.287 13.05 1 46.86 ? S3 HED 204 A 1 
HETATM 5 S S4 HED . . . E 4 -27.239 -0.575 11.149 1 69.67 ? S4 HED 204 A 1 
HETATM 6 C C5 HED . . . E 4 -28.087 -1.89 10.241 1 40.86 ? C5 HED 204 A 1 
HETATM 7 C C6 HED . . . E 4 -27.082 -2.828 9.587 1 45.86 ? C6 HED 204 A 1 
HETATM 8 O O6 HED . . . E 4 -25.993 -2.063 9.113 1 39.61 ? O6 HED 204 A 1 
#
_model_server_stats.io_time_ms              63 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           221 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           8 
#