data_6PHA
#
_model_server_result.job_id            0SfF3d_P5l8zl62xGTtzQA 
_model_server_result.datetime_utc      '2024-12-27 01:09:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6pha 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":302}' 
#
_entry.id    6PHA 
#
_exptl.entry_id    6PHA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6PHA 
_cell.length_a            87.56 
_cell.length_b            87.56 
_cell.length_c            102.376 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6PHA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    'P 31 2"' 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
#
_struct_conn.conn_type_id                   metalc 
_struct_conn.details                        ? 
_struct_conn.id                             metalc1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             214 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              215 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            V 
_struct_conn.ptnr2_label_comp_id            VO4 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             VO4 
_struct_conn.ptnr2_auth_seq_id              301 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.685 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 135 n n 
C1 C2 GOL sing 136 n n 
C1 H11 GOL sing 137 n n 
C1 H12 GOL sing 138 n n 
O1 HO1 GOL sing 139 n n 
C2 O2 GOL sing 140 n n 
C2 C3 GOL sing 141 n n 
C2 H2 GOL sing 142 n n 
O2 HO2 GOL sing 143 n n 
C3 O3 GOL sing 144 n n 
C3 H31 GOL sing 145 n n 
C3 H32 GOL sing 146 n n 
O3 HO3 GOL sing 147 n n 
#
_atom_sites.entry_id                     6PHA 
_atom_sites.fract_transf_matrix[1][1]    0.011421 
_atom_sites.fract_transf_matrix[1][2]    0.006594 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013188 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009768 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 VO4 A 1 301 1 VO4 VO4 . 
C 3 GOL A 1 302 1 GOL GOL . 
D 3 GOL A 1 303 2 GOL GOL . 
E 3 GOL A 1 304 3 GOL GOL . 
F 3 GOL A 1 305 4 GOL GOL . 
G 3 GOL A 1 306 5 GOL GOL . 
H 4 ACT A 1 307 1 ACT ACT . 
I 4 ACT A 1 308 2 ACT ACT . 
J 4 ACT A 1 309 3 ACT ACT . 
K 5 HOH A 1 401 46 HOH HOH . 
K 5 HOH A 2 402 62 HOH HOH . 
K 5 HOH A 3 403 65 HOH HOH . 
K 5 HOH A 4 404 43 HOH HOH . 
K 5 HOH A 5 405 92 HOH HOH . 
K 5 HOH A 6 406 8 HOH HOH . 
K 5 HOH A 7 407 23 HOH HOH . 
K 5 HOH A 8 408 74 HOH HOH . 
K 5 HOH A 9 409 159 HOH HOH . 
K 5 HOH A 10 410 34 HOH HOH . 
K 5 HOH A 11 411 22 HOH HOH . 
K 5 HOH A 12 412 45 HOH HOH . 
K 5 HOH A 13 413 33 HOH HOH . 
K 5 HOH A 14 414 2 HOH HOH . 
K 5 HOH A 15 415 47 HOH HOH . 
K 5 HOH A 16 416 1 HOH HOH . 
K 5 HOH A 17 417 30 HOH HOH . 
K 5 HOH A 18 418 39 HOH HOH . 
K 5 HOH A 19 419 40 HOH HOH . 
K 5 HOH A 20 420 29 HOH HOH . 
K 5 HOH A 21 421 19 HOH HOH . 
K 5 HOH A 22 422 4 HOH HOH . 
K 5 HOH A 23 423 150 HOH HOH . 
K 5 HOH A 24 424 144 HOH HOH . 
K 5 HOH A 25 425 100 HOH HOH . 
K 5 HOH A 26 426 38 HOH HOH . 
K 5 HOH A 27 427 3 HOH HOH . 
K 5 HOH A 28 428 44 HOH HOH . 
K 5 HOH A 29 429 88 HOH HOH . 
K 5 HOH A 30 430 90 HOH HOH . 
K 5 HOH A 31 431 31 HOH HOH . 
K 5 HOH A 32 432 80 HOH HOH . 
K 5 HOH A 33 433 28 HOH HOH . 
K 5 HOH A 34 434 26 HOH HOH . 
K 5 HOH A 35 435 58 HOH HOH . 
K 5 HOH A 36 436 16 HOH HOH . 
K 5 HOH A 37 437 32 HOH HOH . 
K 5 HOH A 38 438 21 HOH HOH . 
K 5 HOH A 39 439 37 HOH HOH . 
K 5 HOH A 40 440 17 HOH HOH . 
K 5 HOH A 41 441 103 HOH HOH . 
K 5 HOH A 42 442 71 HOH HOH . 
K 5 HOH A 43 443 25 HOH HOH . 
K 5 HOH A 44 444 42 HOH HOH . 
K 5 HOH A 45 445 93 HOH HOH . 
K 5 HOH A 46 446 36 HOH HOH . 
K 5 HOH A 47 447 158 HOH HOH . 
K 5 HOH A 48 448 49 HOH HOH . 
K 5 HOH A 49 449 7 HOH HOH . 
K 5 HOH A 50 450 111 HOH HOH . 
K 5 HOH A 51 451 115 HOH HOH . 
K 5 HOH A 52 452 160 HOH HOH . 
K 5 HOH A 53 453 18 HOH HOH . 
K 5 HOH A 54 454 106 HOH HOH . 
K 5 HOH A 55 455 96 HOH HOH . 
K 5 HOH A 56 456 59 HOH HOH . 
K 5 HOH A 57 457 10 HOH HOH . 
K 5 HOH A 58 458 5 HOH HOH . 
K 5 HOH A 59 459 51 HOH HOH . 
K 5 HOH A 60 460 60 HOH HOH . 
K 5 HOH A 61 461 128 HOH HOH . 
K 5 HOH A 62 462 24 HOH HOH . 
K 5 HOH A 63 463 20 HOH HOH . 
K 5 HOH A 64 464 85 HOH HOH . 
K 5 HOH A 65 465 61 HOH HOH . 
K 5 HOH A 66 466 56 HOH HOH . 
K 5 HOH A 67 467 9 HOH HOH . 
K 5 HOH A 68 468 97 HOH HOH . 
K 5 HOH A 69 469 132 HOH HOH . 
K 5 HOH A 70 470 41 HOH HOH . 
K 5 HOH A 71 471 130 HOH HOH . 
K 5 HOH A 72 472 78 HOH HOH . 
K 5 HOH A 73 473 57 HOH HOH . 
K 5 HOH A 74 474 75 HOH HOH . 
K 5 HOH A 75 475 6 HOH HOH . 
K 5 HOH A 76 476 53 HOH HOH . 
K 5 HOH A 77 477 126 HOH HOH . 
K 5 HOH A 78 478 54 HOH HOH . 
K 5 HOH A 79 479 35 HOH HOH . 
K 5 HOH A 80 480 84 HOH HOH . 
K 5 HOH A 81 481 72 HOH HOH . 
K 5 HOH A 82 482 50 HOH HOH . 
K 5 HOH A 83 483 151 HOH HOH . 
K 5 HOH A 84 484 140 HOH HOH . 
K 5 HOH A 85 485 99 HOH HOH . 
K 5 HOH A 86 486 15 HOH HOH . 
K 5 HOH A 87 487 12 HOH HOH . 
K 5 HOH A 88 488 52 HOH HOH . 
K 5 HOH A 89 489 81 HOH HOH . 
K 5 HOH A 90 490 114 HOH HOH . 
K 5 HOH A 91 491 55 HOH HOH . 
K 5 HOH A 92 492 104 HOH HOH . 
K 5 HOH A 93 493 66 HOH HOH . 
K 5 HOH A 94 494 77 HOH HOH . 
K 5 HOH A 95 495 98 HOH HOH . 
K 5 HOH A 96 496 156 HOH HOH . 
K 5 HOH A 97 497 138 HOH HOH . 
K 5 HOH A 98 498 68 HOH HOH . 
K 5 HOH A 99 499 107 HOH HOH . 
K 5 HOH A 100 500 127 HOH HOH . 
K 5 HOH A 101 501 136 HOH HOH . 
K 5 HOH A 102 502 13 HOH HOH . 
K 5 HOH A 103 503 142 HOH HOH . 
K 5 HOH A 104 504 134 HOH HOH . 
K 5 HOH A 105 505 67 HOH HOH . 
K 5 HOH A 106 506 83 HOH HOH . 
K 5 HOH A 107 507 149 HOH HOH . 
K 5 HOH A 108 508 102 HOH HOH . 
K 5 HOH A 109 509 73 HOH HOH . 
K 5 HOH A 110 510 14 HOH HOH . 
K 5 HOH A 111 511 11 HOH HOH . 
K 5 HOH A 112 512 27 HOH HOH . 
K 5 HOH A 113 513 131 HOH HOH . 
K 5 HOH A 114 514 110 HOH HOH . 
K 5 HOH A 115 515 113 HOH HOH . 
K 5 HOH A 116 516 139 HOH HOH . 
K 5 HOH A 117 517 82 HOH HOH . 
K 5 HOH A 118 518 94 HOH HOH . 
K 5 HOH A 119 519 124 HOH HOH . 
K 5 HOH A 120 520 146 HOH HOH . 
K 5 HOH A 121 521 69 HOH HOH . 
K 5 HOH A 122 522 63 HOH HOH . 
K 5 HOH A 123 523 109 HOH HOH . 
K 5 HOH A 124 524 155 HOH HOH . 
K 5 HOH A 125 525 101 HOH HOH . 
K 5 HOH A 126 526 70 HOH HOH . 
K 5 HOH A 127 527 154 HOH HOH . 
K 5 HOH A 128 528 112 HOH HOH . 
K 5 HOH A 129 529 145 HOH HOH . 
K 5 HOH A 130 530 95 HOH HOH . 
K 5 HOH A 131 531 76 HOH HOH . 
K 5 HOH A 132 532 89 HOH HOH . 
K 5 HOH A 133 533 152 HOH HOH . 
K 5 HOH A 134 534 87 HOH HOH . 
K 5 HOH A 135 535 157 HOH HOH . 
K 5 HOH A 136 536 122 HOH HOH . 
K 5 HOH A 137 537 121 HOH HOH . 
K 5 HOH A 138 538 137 HOH HOH . 
K 5 HOH A 139 539 133 HOH HOH . 
K 5 HOH A 140 540 86 HOH HOH . 
K 5 HOH A 141 541 91 HOH HOH . 
K 5 HOH A 142 542 108 HOH HOH . 
K 5 HOH A 143 543 48 HOH HOH . 
K 5 HOH A 144 544 105 HOH HOH . 
K 5 HOH A 145 545 119 HOH HOH . 
K 5 HOH A 146 546 117 HOH HOH . 
K 5 HOH A 147 547 120 HOH HOH . 
K 5 HOH A 148 548 125 HOH HOH . 
K 5 HOH A 149 549 123 HOH HOH . 
K 5 HOH A 150 550 129 HOH HOH . 
K 5 HOH A 151 551 135 HOH HOH . 
K 5 HOH A 152 552 64 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 3 -24.841 25.046 -18.029 1 42.21 ? C1 GOL 302 A 1 
HETATM 2 O O1 GOL . . . C 3 -26.086 24.513 -18.477 1 39.93 ? O1 GOL 302 A 1 
HETATM 3 C C2 GOL . . . C 3 -23.685 24.131 -18.528 1 44.45 ? C2 GOL 302 A 1 
HETATM 4 O O2 GOL . . . C 3 -22.85 24.76 -19.434 1 57.01 ? O2 GOL 302 A 1 
HETATM 5 C C3 GOL . . . C 3 -22.903 23.735 -17.282 1 40.91 ? C3 GOL 302 A 1 
HETATM 6 O O3 GOL . . . C 3 -22.54 22.394 -17.477 1 50.59 ? O3 GOL 302 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           262 
_model_server_stats.encode_time_ms          18 
_model_server_stats.element_count           6 
#