data_6PIU
#
_model_server_result.job_id            d7fQaBXM7sQhIC3acDQubQ 
_model_server_result.datetime_utc      '2024-12-18 18:55:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6piu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1203}' 
#
_entry.id    6PIU 
#
_exptl.entry_id    6PIU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6PIU 
_cell.length_a            54.809 
_cell.length_b            59.654 
_cell.length_c            58.6 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6PIU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
? 4 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 135 A CYS 1097 1_555 B ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? 
metalc ? metalc2 A SG CYS 137 A CYS 1099 1_555 B ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? 
metalc ? metalc3 A SG CYS 183 A CYS 1145 1_555 B ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? 
metalc ? metalc4 A ND1 HIS 187 A HIS 1149 1_555 B ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     6PIU 
_atom_sites.fract_transf_matrix[1][1]    0.018245 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016763 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017065 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 1201 1201 ZN ZN . 
C 3 OL7 A 1 1202 1301 OL7 LIG . 
D 4 EDO A 1 1203 1401 EDO EDO . 
E 4 EDO A 1 1204 1501 EDO EDO . 
F 4 EDO A 1 1205 1601 EDO EDO . 
G 4 EDO A 1 1206 1701 EDO EDO . 
H 5 HOH A 1 1301 46 HOH HOH . 
H 5 HOH A 2 1302 23 HOH HOH . 
H 5 HOH A 3 1303 7 HOH HOH . 
H 5 HOH A 4 1304 58 HOH HOH . 
H 5 HOH A 5 1305 4 HOH HOH . 
H 5 HOH A 6 1306 9 HOH HOH . 
H 5 HOH A 7 1307 68 HOH HOH . 
H 5 HOH A 8 1308 55 HOH HOH . 
H 5 HOH A 9 1309 15 HOH HOH . 
H 5 HOH A 10 1310 2 HOH HOH . 
H 5 HOH A 11 1311 61 HOH HOH . 
H 5 HOH A 12 1312 36 HOH HOH . 
H 5 HOH A 13 1313 28 HOH HOH . 
H 5 HOH A 14 1314 44 HOH HOH . 
H 5 HOH A 15 1315 18 HOH HOH . 
H 5 HOH A 16 1316 45 HOH HOH . 
H 5 HOH A 17 1317 30 HOH HOH . 
H 5 HOH A 18 1318 17 HOH HOH . 
H 5 HOH A 19 1319 11 HOH HOH . 
H 5 HOH A 20 1320 62 HOH HOH . 
H 5 HOH A 21 1321 40 HOH HOH . 
H 5 HOH A 22 1322 5 HOH HOH . 
H 5 HOH A 23 1323 3 HOH HOH . 
H 5 HOH A 24 1324 19 HOH HOH . 
H 5 HOH A 25 1325 26 HOH HOH . 
H 5 HOH A 26 1326 12 HOH HOH . 
H 5 HOH A 27 1327 69 HOH HOH . 
H 5 HOH A 28 1328 1 HOH HOH . 
H 5 HOH A 29 1329 37 HOH HOH . 
H 5 HOH A 30 1330 14 HOH HOH . 
H 5 HOH A 31 1331 63 HOH HOH . 
H 5 HOH A 32 1332 70 HOH HOH . 
H 5 HOH A 33 1333 34 HOH HOH . 
H 5 HOH A 34 1334 43 HOH HOH . 
H 5 HOH A 35 1335 8 HOH HOH . 
H 5 HOH A 36 1336 16 HOH HOH . 
H 5 HOH A 37 1337 25 HOH HOH . 
H 5 HOH A 38 1338 21 HOH HOH . 
H 5 HOH A 39 1339 67 HOH HOH . 
H 5 HOH A 40 1340 27 HOH HOH . 
H 5 HOH A 41 1341 82 HOH HOH . 
H 5 HOH A 42 1342 24 HOH HOH . 
H 5 HOH A 43 1343 73 HOH HOH . 
H 5 HOH A 44 1344 6 HOH HOH . 
H 5 HOH A 45 1345 42 HOH HOH . 
H 5 HOH A 46 1346 72 HOH HOH . 
H 5 HOH A 47 1347 57 HOH HOH . 
H 5 HOH A 48 1348 38 HOH HOH . 
H 5 HOH A 49 1349 51 HOH HOH . 
H 5 HOH A 50 1350 32 HOH HOH . 
H 5 HOH A 51 1351 59 HOH HOH . 
H 5 HOH A 52 1352 10 HOH HOH . 
H 5 HOH A 53 1353 64 HOH HOH . 
H 5 HOH A 54 1354 33 HOH HOH . 
H 5 HOH A 55 1355 89 HOH HOH . 
H 5 HOH A 56 1356 86 HOH HOH . 
H 5 HOH A 57 1357 41 HOH HOH . 
H 5 HOH A 58 1358 22 HOH HOH . 
H 5 HOH A 59 1359 84 HOH HOH . 
H 5 HOH A 60 1360 48 HOH HOH . 
H 5 HOH A 61 1361 49 HOH HOH . 
H 5 HOH A 62 1362 39 HOH HOH . 
H 5 HOH A 63 1363 54 HOH HOH . 
H 5 HOH A 64 1364 79 HOH HOH . 
H 5 HOH A 65 1365 29 HOH HOH . 
H 5 HOH A 66 1366 60 HOH HOH . 
H 5 HOH A 67 1367 31 HOH HOH . 
H 5 HOH A 68 1368 65 HOH HOH . 
H 5 HOH A 69 1369 85 HOH HOH . 
H 5 HOH A 70 1370 56 HOH HOH . 
H 5 HOH A 71 1371 13 HOH HOH . 
H 5 HOH A 72 1372 87 HOH HOH . 
H 5 HOH A 73 1373 88 HOH HOH . 
H 5 HOH A 74 1374 81 HOH HOH . 
H 5 HOH A 75 1375 75 HOH HOH . 
H 5 HOH A 76 1376 53 HOH HOH . 
H 5 HOH A 77 1377 35 HOH HOH . 
H 5 HOH A 78 1378 80 HOH HOH . 
H 5 HOH A 79 1379 78 HOH HOH . 
H 5 HOH A 80 1380 77 HOH HOH . 
H 5 HOH A 81 1381 47 HOH HOH . 
H 5 HOH A 82 1382 50 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 4 -32.263 7.074 1.867 1 36.03 ? C1 EDO 1203 A 1 
HETATM 2 O O1 EDO . . . D 4 -33.216 6.074 1.49 1 51.84 ? O1 EDO 1203 A 1 
HETATM 3 C C2 EDO . . . D 4 -32.022 7.977 0.664 1 44.57 ? C2 EDO 1203 A 1 
HETATM 4 O O2 EDO . . . D 4 -32.269 7.236 -0.537 1 44.68 ? O2 EDO 1203 A 1 
HETATM 5 H H11 EDO . . . D 4 -32.643 7.659 2.707 1 43.48 ? H11 EDO 1203 A 1 
HETATM 6 H H12 EDO . . . D 4 -31.328 6.604 2.18 1 43.48 ? H12 EDO 1203 A 1 
HETATM 7 H HO1 EDO . . . D 4 -34.004 6.501 1.127 1 62.45 ? HO1 EDO 1203 A 1 
HETATM 8 H H21 EDO . . . D 4 -32.685 8.843 0.71 1 53.72 ? H21 EDO 1203 A 1 
HETATM 9 H H22 EDO . . . D 4 -30.992 8.34 0.672 1 53.72 ? H22 EDO 1203 A 1 
HETATM 10 H HO2 EDO . . . D 4 -32.003 7.764 -1.302 1 53.85 ? HO2 EDO 1203 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           10 
#