data_6PJ0
#
_model_server_result.job_id            W0J9_pw2yuq0OXdIZS3o4w 
_model_server_result.datetime_utc      '2024-12-18 17:41:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6pj0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":1305}' 
#
_entry.id    6PJ0 
#
_exptl.entry_id    6PJ0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6PJ0 
_cell.length_a            54.169 
_cell.length_b            58.515 
_cell.length_c            59.646 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6PJ0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 135 A CYS 1097 1_555 C ZN ZN . A ZN 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? 
metalc ? metalc2 A SG CYS 137 A CYS 1099 1_555 C ZN ZN . A ZN 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? 
metalc ? metalc3 A SG CYS 183 A CYS 1145 1_555 C ZN ZN . A ZN 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? 
metalc ? metalc4 A ND1 HIS 187 A HIS 1149 1_555 C ZN ZN . A ZN 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     6PJ0 
_atom_sites.fract_transf_matrix[1][1]    0.018461 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01709 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016766 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 OMV A 1 1301 1301 OMV LIG . 
C 3 ZN A 1 1302 9401 ZN ZN . 
D 4 EDO A 1 1303 1501 EDO EDO . 
E 4 EDO A 1 1304 1701 EDO EDO . 
F 4 EDO A 1 1305 1801 EDO EDO . 
G 5 SO4 A 1 1306 999 SO4 SO4 . 
H 6 HOH A 1 1401 39 HOH HOH . 
H 6 HOH A 2 1402 119 HOH HOH . 
H 6 HOH A 3 1403 80 HOH HOH . 
H 6 HOH A 4 1404 48 HOH HOH . 
H 6 HOH A 5 1405 29 HOH HOH . 
H 6 HOH A 6 1406 62 HOH HOH . 
H 6 HOH A 7 1407 20 HOH HOH . 
H 6 HOH A 8 1408 17 HOH HOH . 
H 6 HOH A 9 1409 60 HOH HOH . 
H 6 HOH A 10 1410 19 HOH HOH . 
H 6 HOH A 11 1411 57 HOH HOH . 
H 6 HOH A 12 1412 18 HOH HOH . 
H 6 HOH A 13 1413 35 HOH HOH . 
H 6 HOH A 14 1414 37 HOH HOH . 
H 6 HOH A 15 1415 21 HOH HOH . 
H 6 HOH A 16 1416 79 HOH HOH . 
H 6 HOH A 17 1417 5 HOH HOH . 
H 6 HOH A 18 1418 46 HOH HOH . 
H 6 HOH A 19 1419 7 HOH HOH . 
H 6 HOH A 20 1420 54 HOH HOH . 
H 6 HOH A 21 1421 24 HOH HOH . 
H 6 HOH A 22 1422 88 HOH HOH . 
H 6 HOH A 23 1423 121 HOH HOH . 
H 6 HOH A 24 1424 49 HOH HOH . 
H 6 HOH A 25 1425 55 HOH HOH . 
H 6 HOH A 26 1426 41 HOH HOH . 
H 6 HOH A 27 1427 105 HOH HOH . 
H 6 HOH A 28 1428 33 HOH HOH . 
H 6 HOH A 29 1429 50 HOH HOH . 
H 6 HOH A 30 1430 71 HOH HOH . 
H 6 HOH A 31 1431 58 HOH HOH . 
H 6 HOH A 32 1432 1 HOH HOH . 
H 6 HOH A 33 1433 117 HOH HOH . 
H 6 HOH A 34 1434 14 HOH HOH . 
H 6 HOH A 35 1435 26 HOH HOH . 
H 6 HOH A 36 1436 2 HOH HOH . 
H 6 HOH A 37 1437 61 HOH HOH . 
H 6 HOH A 38 1438 110 HOH HOH . 
H 6 HOH A 39 1439 109 HOH HOH . 
H 6 HOH A 40 1440 22 HOH HOH . 
H 6 HOH A 41 1441 27 HOH HOH . 
H 6 HOH A 42 1442 12 HOH HOH . 
H 6 HOH A 43 1443 32 HOH HOH . 
H 6 HOH A 44 1444 56 HOH HOH . 
H 6 HOH A 45 1445 8 HOH HOH . 
H 6 HOH A 46 1446 64 HOH HOH . 
H 6 HOH A 47 1447 95 HOH HOH . 
H 6 HOH A 48 1448 11 HOH HOH . 
H 6 HOH A 49 1449 34 HOH HOH . 
H 6 HOH A 50 1450 4 HOH HOH . 
H 6 HOH A 51 1451 36 HOH HOH . 
H 6 HOH A 52 1452 90 HOH HOH . 
H 6 HOH A 53 1453 43 HOH HOH . 
H 6 HOH A 54 1454 28 HOH HOH . 
H 6 HOH A 55 1455 3 HOH HOH . 
H 6 HOH A 56 1456 10 HOH HOH . 
H 6 HOH A 57 1457 40 HOH HOH . 
H 6 HOH A 58 1458 38 HOH HOH . 
H 6 HOH A 59 1459 77 HOH HOH . 
H 6 HOH A 60 1460 76 HOH HOH . 
H 6 HOH A 61 1461 104 HOH HOH . 
H 6 HOH A 62 1462 13 HOH HOH . 
H 6 HOH A 63 1463 68 HOH HOH . 
H 6 HOH A 64 1464 6 HOH HOH . 
H 6 HOH A 65 1465 93 HOH HOH . 
H 6 HOH A 66 1466 107 HOH HOH . 
H 6 HOH A 67 1467 15 HOH HOH . 
H 6 HOH A 68 1468 25 HOH HOH . 
H 6 HOH A 69 1469 70 HOH HOH . 
H 6 HOH A 70 1470 52 HOH HOH . 
H 6 HOH A 71 1471 9 HOH HOH . 
H 6 HOH A 72 1472 23 HOH HOH . 
H 6 HOH A 73 1473 84 HOH HOH . 
H 6 HOH A 74 1474 112 HOH HOH . 
H 6 HOH A 75 1475 75 HOH HOH . 
H 6 HOH A 76 1476 67 HOH HOH . 
H 6 HOH A 77 1477 16 HOH HOH . 
H 6 HOH A 78 1478 82 HOH HOH . 
H 6 HOH A 79 1479 31 HOH HOH . 
H 6 HOH A 80 1480 81 HOH HOH . 
H 6 HOH A 81 1481 65 HOH HOH . 
H 6 HOH A 82 1482 103 HOH HOH . 
H 6 HOH A 83 1483 108 HOH HOH . 
H 6 HOH A 84 1484 30 HOH HOH . 
H 6 HOH A 85 1485 63 HOH HOH . 
H 6 HOH A 86 1486 106 HOH HOH . 
H 6 HOH A 87 1487 86 HOH HOH . 
H 6 HOH A 88 1488 44 HOH HOH . 
H 6 HOH A 89 1489 42 HOH HOH . 
H 6 HOH A 90 1490 45 HOH HOH . 
H 6 HOH A 91 1491 114 HOH HOH . 
H 6 HOH A 92 1492 115 HOH HOH . 
H 6 HOH A 93 1493 83 HOH HOH . 
H 6 HOH A 94 1494 120 HOH HOH . 
H 6 HOH A 95 1495 98 HOH HOH . 
H 6 HOH A 96 1496 85 HOH HOH . 
H 6 HOH A 97 1497 72 HOH HOH . 
H 6 HOH A 98 1498 73 HOH HOH . 
H 6 HOH A 99 1499 69 HOH HOH . 
H 6 HOH A 100 1500 111 HOH HOH . 
H 6 HOH A 101 1501 59 HOH HOH . 
H 6 HOH A 102 1502 116 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . F 4 -1.142 -8.186 -4.758 1 37.2 ? C1 EDO 1305 A 1 
HETATM 2 O O1 EDO . . . F 4 -0.071 -7.603 -5.51 1 67.44 ? O1 EDO 1305 A 1 
HETATM 3 C C2 EDO . . . F 4 -1.742 -9.352 -5.536 1 60.38 ? C2 EDO 1305 A 1 
HETATM 4 O O2 EDO . . . F 4 -0.773 -10.401 -5.658 1 72.95 ? O2 EDO 1305 A 1 
HETATM 5 H H11 EDO . . . F 4 -1.912 -7.434 -4.567 1 44.7 ? H11 EDO 1305 A 1 
HETATM 6 H H12 EDO . . . F 4 -0.769 -8.537 -3.794 1 44.7 ? H12 EDO 1305 A 1 
HETATM 7 H HO1 EDO . . . F 4 0.373 -6.933 -4.971 1 80.99 ? HO1 EDO 1305 A 1 
HETATM 8 H H21 EDO . . . F 4 -2.05 -9.016 -6.528 1 72.52 ? H21 EDO 1305 A 1 
HETATM 9 H H22 EDO . . . F 4 -2.628 -9.725 -5.018 1 72.52 ? H22 EDO 1305 A 1 
HETATM 10 H HO2 EDO . . . F 4 -1.109 -11.083 -6.255 1 87.6 ? HO2 EDO 1305 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           10 
#