data_6PL8
#
_model_server_result.job_id            M3Fl9u77bmSQmjypCUB31w 
_model_server_result.datetime_utc      '2024-11-22 21:57:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6pl8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":503}' 
#
_entry.id    6PL8 
#
_exptl.entry_id    6PL8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6PL8 
_cell.length_a            98.705 
_cell.length_b            98.705 
_cell.length_c            81.719 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6PL8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B O3' DT 3 T DT 3 1_555 B P A38 4 T A38 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.613 ? 
covale ? covale2 B O3' A38 4 T A38 4 1_555 B P DA 5 T DA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.602 ? 
metalc ? metalc1 A OD2 ASP 16 A ASP 13 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.966 ? 
metalc ? metalc2 A OD1 ASP 16 A ASP 13 1_555 F MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? 
metalc ? metalc3 A O MET 17 A MET 14 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? 
metalc ? metalc4 A OD2 ASP 118 A ASP 115 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? 
metalc ? metalc5 A OD1 ASP 118 A ASP 115 1_555 F MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? 
metalc ? metalc6 A OE1 GLU 119 A GLU 116 1_555 F MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.921 ? 
metalc ? metalc7 D O1A 1FZ . A 1FZ 501 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? 
metalc ? metalc8 D O2B 1FZ . A 1FZ 501 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? 
metalc ? metalc9 D O2G 1FZ . A 1FZ 501 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? 
metalc ? metalc10 D O1A 1FZ . A 1FZ 501 1_555 F MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? 
metalc ? metalc11 F MG MG . A MG 503 1_555 H O HOH . A HOH 635 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? 
metalc ? metalc12 F MG MG . A MG 503 1_555 C O3' DT 8 P DT 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? 
hydrog WATSON-CRICK hydrog1 B N1 DA 5 T DA 5 1_555 C N3 DT 8 P DT 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 B N6 DA 5 T DA 5 1_555 C O4 DT 8 P DT 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 B N3 DT 6 T DT 6 1_555 C N1 DA 7 P DA 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 B O4 DT 6 T DT 6 1_555 C N6 DA 7 P DA 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 B N1 DG 7 T DG 7 1_555 C N3 DC 6 P DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 B N2 DG 7 T DG 7 1_555 C O2 DC 6 P DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog7 B O6 DG 7 T DG 7 1_555 C N4 DC 6 P DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog8 B N1 DA 8 T DA 8 1_555 C N3 DT 5 P DT 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog9 B N6 DA 8 T DA 8 1_555 C O4 DT 5 P DT 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 B N3 DC 9 T DC 9 1_555 C N1 DG 4 P DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog11 B N4 DC 9 T DC 9 1_555 C O6 DG 4 P DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 B O2 DC 9 T DC 9 1_555 C N2 DG 4 P DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog13 B N1 DG 10 T DG 10 1_555 C N3 DC 3 P DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog14 B N2 DG 10 T DG 10 1_555 C O2 DC 3 P DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog15 B O6 DG 10 T DG 10 1_555 C N4 DC 3 P DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog16 B N3 DC 11 T DC 11 1_555 C N1 DG 2 P DG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog17 B N4 DC 11 T DC 11 1_555 C O6 DG 2 P DG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog18 B O2 DC 11 T DC 11 1_555 C N2 DG 2 P DG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog19 B N3 DT 12 T DT 12 1_555 C N1 DA 1 P DA 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog20 B O4 DT 12 T DT 12 1_555 C N6 DA 1 P DA 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6PL8 
_atom_sites.fract_transf_matrix[1][1]    0.010131 
_atom_sites.fract_transf_matrix[1][2]    0.005849 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011699 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012237 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 1FZ A 1 501 501 1FZ 1FZ . 
E 5 MG A 1 502 502 MG MG . 
F 5 MG A 1 503 503 MG MG . 
G 6 GOL A 1 504 504 GOL GOL . 
H 7 HOH A 1 601 64 HOH HOH . 
H 7 HOH A 2 602 94 HOH HOH . 
H 7 HOH A 3 603 5 HOH HOH . 
H 7 HOH A 4 604 13 HOH HOH . 
H 7 HOH A 5 605 118 HOH HOH . 
H 7 HOH A 6 606 54 HOH HOH . 
H 7 HOH A 7 607 12 HOH HOH . 
H 7 HOH A 8 608 27 HOH HOH . 
H 7 HOH A 9 609 73 HOH HOH . 
H 7 HOH A 10 610 24 HOH HOH . 
H 7 HOH A 11 611 9 HOH HOH . 
H 7 HOH A 12 612 2 HOH HOH . 
H 7 HOH A 13 613 89 HOH HOH . 
H 7 HOH A 14 614 22 HOH HOH . 
H 7 HOH A 15 615 44 HOH HOH . 
H 7 HOH A 16 616 105 HOH HOH . 
H 7 HOH A 17 617 3 HOH HOH . 
H 7 HOH A 18 618 87 HOH HOH . 
H 7 HOH A 19 619 23 HOH HOH . 
H 7 HOH A 20 620 92 HOH HOH . 
H 7 HOH A 21 621 110 HOH HOH . 
H 7 HOH A 22 622 7 HOH HOH . 
H 7 HOH A 23 623 48 HOH HOH . 
H 7 HOH A 24 624 6 HOH HOH . 
H 7 HOH A 25 625 35 HOH HOH . 
H 7 HOH A 26 626 106 HOH HOH . 
H 7 HOH A 27 627 77 HOH HOH . 
H 7 HOH A 28 628 51 HOH HOH . 
H 7 HOH A 29 629 81 HOH HOH . 
H 7 HOH A 30 630 102 HOH HOH . 
H 7 HOH A 31 631 112 HOH HOH . 
H 7 HOH A 32 632 59 HOH HOH . 
H 7 HOH A 33 633 55 HOH HOH . 
H 7 HOH A 34 634 78 HOH HOH . 
H 7 HOH A 35 635 25 HOH HOH . 
H 7 HOH A 36 636 4 HOH HOH . 
H 7 HOH A 37 637 32 HOH HOH . 
H 7 HOH A 38 638 62 HOH HOH . 
H 7 HOH A 39 639 69 HOH HOH . 
H 7 HOH A 40 640 17 HOH HOH . 
H 7 HOH A 41 641 30 HOH HOH . 
H 7 HOH A 42 642 18 HOH HOH . 
H 7 HOH A 43 643 8 HOH HOH . 
H 7 HOH A 44 644 75 HOH HOH . 
H 7 HOH A 45 645 119 HOH HOH . 
H 7 HOH A 46 646 53 HOH HOH . 
H 7 HOH A 47 647 61 HOH HOH . 
H 7 HOH A 48 648 20 HOH HOH . 
H 7 HOH A 49 649 52 HOH HOH . 
H 7 HOH A 50 650 130 HOH HOH . 
H 7 HOH A 51 651 56 HOH HOH . 
H 7 HOH A 52 652 63 HOH HOH . 
H 7 HOH A 53 653 91 HOH HOH . 
H 7 HOH A 54 654 40 HOH HOH . 
H 7 HOH A 55 655 66 HOH HOH . 
H 7 HOH A 56 656 33 HOH HOH . 
H 7 HOH A 57 657 82 HOH HOH . 
H 7 HOH A 58 658 47 HOH HOH . 
H 7 HOH A 59 659 111 HOH HOH . 
H 7 HOH A 60 660 41 HOH HOH . 
H 7 HOH A 61 661 28 HOH HOH . 
H 7 HOH A 62 662 88 HOH HOH . 
H 7 HOH A 63 663 124 HOH HOH . 
H 7 HOH A 64 664 84 HOH HOH . 
H 7 HOH A 65 665 131 HOH HOH . 
H 7 HOH A 66 666 38 HOH HOH . 
H 7 HOH A 67 667 34 HOH HOH . 
H 7 HOH A 68 668 16 HOH HOH . 
H 7 HOH A 69 669 101 HOH HOH . 
H 7 HOH A 70 670 96 HOH HOH . 
H 7 HOH A 71 671 115 HOH HOH . 
H 7 HOH A 72 672 65 HOH HOH . 
H 7 HOH A 73 673 117 HOH HOH . 
H 7 HOH A 74 674 120 HOH HOH . 
H 7 HOH A 75 675 36 HOH HOH . 
H 7 HOH A 76 676 14 HOH HOH . 
H 7 HOH A 77 677 79 HOH HOH . 
H 7 HOH A 78 678 97 HOH HOH . 
H 7 HOH A 79 679 19 HOH HOH . 
H 7 HOH A 80 680 72 HOH HOH . 
H 7 HOH A 81 681 99 HOH HOH . 
H 7 HOH A 82 682 42 HOH HOH . 
H 7 HOH A 83 683 57 HOH HOH . 
H 7 HOH A 84 684 68 HOH HOH . 
H 7 HOH A 85 685 39 HOH HOH . 
H 7 HOH A 86 686 74 HOH HOH . 
H 7 HOH A 87 687 67 HOH HOH . 
H 7 HOH A 88 688 21 HOH HOH . 
H 7 HOH A 89 689 95 HOH HOH . 
H 7 HOH A 90 690 80 HOH HOH . 
H 7 HOH A 91 691 70 HOH HOH . 
H 7 HOH A 92 692 43 HOH HOH . 
H 7 HOH A 93 693 121 HOH HOH . 
H 7 HOH A 94 694 49 HOH HOH . 
H 7 HOH A 95 695 45 HOH HOH . 
H 7 HOH A 96 696 76 HOH HOH . 
H 7 HOH A 97 697 15 HOH HOH . 
H 7 HOH A 98 698 71 HOH HOH . 
H 7 HOH A 99 699 50 HOH HOH . 
H 7 HOH A 100 700 58 HOH HOH . 
H 7 HOH A 101 701 108 HOH HOH . 
H 7 HOH A 102 702 109 HOH HOH . 
H 7 HOH A 103 703 125 HOH HOH . 
H 7 HOH A 104 704 83 HOH HOH . 
H 7 HOH A 105 705 129 HOH HOH . 
H 7 HOH A 106 706 127 HOH HOH . 
H 7 HOH A 107 707 128 HOH HOH . 
I 7 HOH T 1 101 86 HOH HOH . 
I 7 HOH T 2 102 126 HOH HOH . 
I 7 HOH T 3 103 100 HOH HOH . 
I 7 HOH T 4 104 29 HOH HOH . 
J 7 HOH P 1 101 1 HOH HOH . 
J 7 HOH P 2 102 90 HOH HOH . 
J 7 HOH P 3 103 46 HOH HOH . 
J 7 HOH P 4 104 85 HOH HOH . 
J 7 HOH P 5 105 37 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         F 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               22.413 
_atom_site.Cartn_y               -39.839 
_atom_site.Cartn_z               15.959 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        21.37 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           503 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           266 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#