data_6PLG # _model_server_result.job_id JhgNh3fh-eTNVFyfmH05LA _model_server_result.datetime_utc '2024-10-19 09:35:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6plg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":401}' # _entry.id 6PLG # _exptl.entry_id 6PLG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.369 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-(4-{3-[(4,5-dichloro-1-methyl-1H-indole-2-carbonyl)amino]oxetan-3-yl}phenyl)(pyridin-3-yl)acetic acid' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 105.98 _cell.angle_beta 96.2 _cell.angle_gamma 101.42 _cell.entry_id 6PLG _cell.length_a 44.649 _cell.length_b 112.699 _cell.length_c 137.84 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PLG _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,I,M,N 1 1 B,F,J,O,P 2 1 C,G,K,Q,R 3 1 D,H,L,S,T 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 O N N ? 2 Q N N ? 2 S N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 115 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 116 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id E _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 115 _struct_conn.ptnr2_auth_asym_id E _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 116 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.99 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C26 H21 Cl2 N3 O4' _chem_comp.formula_weight 510.369 _chem_comp.id ONS _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-(4-{3-[(4,5-dichloro-1-methyl-1H-indole-2-carbonyl)amino]oxetan-3-yl}phenyl)(pyridin-3-yl)acetic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6PLG _atom_sites.fract_transf_matrix[1][1] 0.022397 _atom_sites.fract_transf_matrix[1][2] 0.004524 _atom_sites.fract_transf_matrix[1][3] 0.004 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009052 _atom_sites.fract_transf_matrix[2][3] 0.002893 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007661 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 ONS A 1 401 401 ONS t45 . J 2 ONS B 1 401 401 ONS t45 . K 2 ONS C 1 401 401 ONS t45 . L 2 ONS D 1 401 401 ONS t45 . M 2 ONS E 1 401 401 ONS t45 . N 3 MLT E 1 402 503 MLT MLT . O 2 ONS F 1 401 401 ONS t45 . P 3 MLT F 1 402 503 MLT MLT . Q 2 ONS G 1 401 401 ONS t45 . R 3 MLT G 1 402 501 MLT MLT . S 2 ONS H 1 401 401 ONS t45 . T 3 MLT H 1 402 503 MLT MLT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 ONS . . . J 2 -9.763 15.466 48.344 1 98.93 ? O2 ONS 401 B 1 HETATM 2 C C19 ONS . . . J 2 -9.7 15.56 49.596 1 93.57 ? C19 ONS 401 B 1 HETATM 3 O O3 ONS . . . J 2 -9.191 14.685 50.342 1 96.91 ? O3 ONS 401 B 1 HETATM 4 C C18 ONS . . . J 2 -10.221 16.817 50.24 1 88.82 ? C18 ONS 401 B 1 HETATM 5 C C20 ONS . . . J 2 -11.712 16.853 50.34 1 80.8 ? C20 ONS 401 B 1 HETATM 6 C C21 ONS . . . J 2 -12.299 17.221 51.563 1 76.25 ? C21 ONS 401 B 1 HETATM 7 N N2 ONS . . . J 2 -13.634 17.264 51.701 1 72.9 ? N2 ONS 401 B 1 HETATM 8 C C22 ONS . . . J 2 -14.439 16.962 50.667 1 70.72 ? C22 ONS 401 B 1 HETATM 9 C C23 ONS . . . J 2 -13.908 16.597 49.426 1 71.47 ? C23 ONS 401 B 1 HETATM 10 C C24 ONS . . . J 2 -12.533 16.53 49.255 1 73.69 ? C24 ONS 401 B 1 HETATM 11 C C15 ONS . . . J 2 -9.621 17.95 49.477 1 87.78 ? C15 ONS 401 B 1 HETATM 12 C C16 ONS . . . J 2 -10.294 18.723 48.534 1 86.35 ? C16 ONS 401 B 1 HETATM 13 C C17 ONS . . . J 2 -9.628 19.748 47.866 1 83.93 ? C17 ONS 401 B 1 HETATM 14 C C14 ONS . . . J 2 -8.285 18.215 49.715 1 83.6 ? C14 ONS 401 B 1 HETATM 15 C C13 ONS . . . J 2 -7.61 19.233 49.045 1 82.18 ? C13 ONS 401 B 1 HETATM 16 C C12 ONS . . . J 2 -8.274 20.025 48.098 1 75.66 ? C12 ONS 401 B 1 HETATM 17 C C9 ONS . . . J 2 -7.602 21.173 47.357 1 65.66 ? C9 ONS 401 B 1 HETATM 18 C C10 ONS . . . J 2 -6.541 20.813 46.339 1 63.01 ? C10 ONS 401 B 1 HETATM 19 O O1 ONS . . . J 2 -5.517 21.318 47.204 1 63.06 ? O1 ONS 401 B 1 HETATM 20 C C11 ONS . . . J 2 -6.481 21.81 48.156 1 64 ? C11 ONS 401 B 1 HETATM 21 N N1 ONS . . . J 2 -8.561 22.11 46.833 1 60.28 ? N1 ONS 401 B 1 HETATM 22 C C8 ONS . . . J 2 -9.358 22.789 47.645 1 66.62 ? C8 ONS 401 B 1 HETATM 23 O O ONS . . . J 2 -9.248 22.719 48.857 1 64.25 ? O ONS 401 B 1 HETATM 24 C C6 ONS . . . J 2 -10.45 23.593 47.042 1 75.94 ? C6 ONS 401 B 1 HETATM 25 C C7 ONS . . . J 2 -10.978 23.349 45.793 1 80.18 ? C7 ONS 401 B 1 HETATM 26 N N ONS . . . J 2 -11.107 24.667 47.572 1 82.42 ? N ONS 401 B 1 HETATM 27 C C25 ONS . . . J 2 -10.831 25.254 48.908 1 81.47 ? C25 ONS 401 B 1 HETATM 28 C C5 ONS . . . J 2 -12.048 25.133 46.711 1 83.7 ? C5 ONS 401 B 1 HETATM 29 C C ONS . . . J 2 -12.976 26.173 46.759 1 80.94 ? C ONS 401 B 1 HETATM 30 C C1 ONS . . . J 2 -13.822 26.373 45.664 1 84.28 ? C1 ONS 401 B 1 HETATM 31 C C4 ONS . . . J 2 -11.985 24.317 45.588 1 82.39 ? C4 ONS 401 B 1 HETATM 32 C C3 ONS . . . J 2 -12.832 24.52 44.516 1 80.48 ? C3 ONS 401 B 1 HETATM 33 CL CL ONS . . . J 2 -12.78 23.489 43.057 1 90.76 ? CL ONS 401 B 1 HETATM 34 C C2 ONS . . . J 2 -13.742 25.538 44.543 1 83.42 ? C2 ONS 401 B 1 HETATM 35 CL CL1 ONS . . . J 2 -14.776 25.703 43.079 1 91.37 ? CL1 ONS 401 B 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 35 #