data_6PLG
#
_model_server_result.job_id            rzBwkvwOV7MT7V1N5jT0NA 
_model_server_result.datetime_utc      '2024-11-26 21:14:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6plg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":401}' 
#
_entry.id    6PLG 
#
_exptl.entry_id    6PLG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              510.369 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-(4-{3-[(4,5-dichloro-1-methyl-1H-indole-2-carbonyl)amino]oxetan-3-yl}phenyl)(pyridin-3-yl)acetic acid' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         105.98 
_cell.angle_beta          96.2 
_cell.angle_gamma         101.42 
_cell.entry_id            6PLG 
_cell.length_a            44.649 
_cell.length_b            112.699 
_cell.length_c            137.84 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6PLG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
PISA dimeric 2 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,I,M,N 1 1 
B,F,J,O,P 2 1 
C,G,K,Q,R 3 1 
D,H,L,S,T 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 O N N 
? 2 Q N N 
? 2 S N N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             115 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              116 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            E 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             115 
_struct_conn.ptnr2_auth_asym_id             E 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              116 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.99 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C26 H21 Cl2 N3 O4' 
_chem_comp.formula_weight    510.369 
_chem_comp.id                ONS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-(4-{3-[(4,5-dichloro-1-methyl-1H-indole-2-carbonyl)amino]oxetan-3-yl}phenyl)(pyridin-3-yl)acetic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N2 C21 ONS doub 249 n y 
N2 C22 ONS sing 250 n y 
C21 C20 ONS sing 251 n y 
O3 C19 ONS doub 252 n n 
C22 C23 ONS doub 253 n y 
C18 C20 ONS sing 254 n n 
C18 C19 ONS sing 255 n n 
C18 C15 ONS sing 256 n n 
C20 C24 ONS doub 257 n y 
C19 O2 ONS sing 258 n n 
C14 C15 ONS doub 259 n y 
C14 C13 ONS sing 260 n y 
C15 C16 ONS sing 261 n y 
C23 C24 ONS sing 262 n y 
C13 C12 ONS doub 263 n y 
C25 N ONS sing 264 n n 
O C8 ONS doub 265 n n 
C16 C17 ONS doub 266 n y 
C12 C17 ONS sing 267 n y 
C12 C9 ONS sing 268 n n 
C11 C9 ONS sing 269 n n 
C11 O1 ONS sing 270 n n 
C8 C6 ONS sing 271 n n 
C8 N1 ONS sing 272 n n 
N C6 ONS sing 273 n y 
N C5 ONS sing 274 n y 
C9 N1 ONS sing 275 n n 
C9 C10 ONS sing 276 n n 
O1 C10 ONS sing 277 n n 
C6 C7 ONS doub 278 n y 
C C5 ONS doub 279 n y 
C C1 ONS sing 280 n y 
C5 C4 ONS sing 281 n y 
C7 C4 ONS sing 282 n y 
C1 C2 ONS doub 283 n y 
C4 C3 ONS doub 284 n y 
C2 C3 ONS sing 285 n y 
C2 CL1 ONS sing 286 n n 
C3 CL ONS sing 287 n n 
O2 H1 ONS sing 288 n n 
C18 H2 ONS sing 289 n n 
C21 H3 ONS sing 290 n n 
C22 H4 ONS sing 291 n n 
C23 H5 ONS sing 292 n n 
C24 H6 ONS sing 293 n n 
C16 H7 ONS sing 294 n n 
C17 H8 ONS sing 295 n n 
C14 H9 ONS sing 296 n n 
C13 H10 ONS sing 297 n n 
C10 H11 ONS sing 298 n n 
C10 H12 ONS sing 299 n n 
C11 H13 ONS sing 300 n n 
C11 H14 ONS sing 301 n n 
N1 H15 ONS sing 302 n n 
C7 H16 ONS sing 303 n n 
C25 H17 ONS sing 304 n n 
C25 H18 ONS sing 305 n n 
C25 H19 ONS sing 306 n n 
C H20 ONS sing 307 n n 
C1 H21 ONS sing 308 n n 
#
_atom_sites.entry_id                     6PLG 
_atom_sites.fract_transf_matrix[1][1]    0.022397 
_atom_sites.fract_transf_matrix[1][2]    0.004524 
_atom_sites.fract_transf_matrix[1][3]    0.004 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009052 
_atom_sites.fract_transf_matrix[2][3]    0.002893 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007661 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 ONS A 1 401 401 ONS t45 . 
J 2 ONS B 1 401 401 ONS t45 . 
K 2 ONS C 1 401 401 ONS t45 . 
L 2 ONS D 1 401 401 ONS t45 . 
M 2 ONS E 1 401 401 ONS t45 . 
N 3 MLT E 1 402 503 MLT MLT . 
O 2 ONS F 1 401 401 ONS t45 . 
P 3 MLT F 1 402 503 MLT MLT . 
Q 2 ONS G 1 401 401 ONS t45 . 
R 3 MLT G 1 402 501 MLT MLT . 
S 2 ONS H 1 401 401 ONS t45 . 
T 3 MLT H 1 402 503 MLT MLT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O2 ONS . . . M 2 -10.408 28.667 -21.212 1 128.03 ? O2 ONS 401 E 1 
HETATM 2 C C19 ONS . . . M 2 -11.022 29.087 -20.201 1 115.27 ? C19 ONS 401 E 1 
HETATM 3 O O3 ONS . . . M 2 -11.242 28.353 -19.206 1 118.38 ? O3 ONS 401 E 1 
HETATM 4 C C18 ONS . . . M 2 -11.493 30.527 -20.158 1 102.21 ? C18 ONS 401 E 1 
HETATM 5 C C20 ONS . . . M 2 -12.608 30.789 -21.105 1 100.41 ? C20 ONS 401 E 1 
HETATM 6 C C21 ONS . . . M 2 -13.712 31.506 -20.651 1 100.42 ? C21 ONS 401 E 1 
HETATM 7 N N2 ONS . . . M 2 -14.744 31.762 -21.47 1 103.73 ? N2 ONS 401 E 1 
HETATM 8 C C22 ONS . . . M 2 -14.755 31.342 -22.744 1 104.95 ? C22 ONS 401 E 1 
HETATM 9 C C23 ONS . . . M 2 -13.676 30.617 -23.249 1 106.53 ? C23 ONS 401 E 1 
HETATM 10 C C24 ONS . . . M 2 -12.593 30.337 -22.426 1 104.63 ? C24 ONS 401 E 1 
HETATM 11 C C15 ONS . . . M 2 -10.327 31.413 -20.386 1 93.21 ? C15 ONS 401 E 1 
HETATM 12 C C16 ONS . . . M 2 -10.155 32.196 -21.529 1 89.58 ? C16 ONS 401 E 1 
HETATM 13 C C17 ONS . . . M 2 -9.014 32.986 -21.641 1 92.69 ? C17 ONS 401 E 1 
HETATM 14 C C14 ONS . . . M 2 -9.361 31.431 -19.379 1 90.61 ? C14 ONS 401 E 1 
HETATM 15 C C13 ONS . . . M 2 -8.225 32.219 -19.489 1 89.24 ? C13 ONS 401 E 1 
HETATM 16 C C12 ONS . . . M 2 -8.038 33.006 -20.625 1 94.72 ? C12 ONS 401 E 1 
HETATM 17 C C9 ONS . . . M 2 -6.811 33.88 -20.757 1 104.07 ? C9 ONS 401 E 1 
HETATM 18 C C10 ONS . . . M 2 -5.505 33.119 -20.802 1 105.58 ? C10 ONS 401 E 1 
HETATM 19 O O1 ONS . . . M 2 -5.106 33.71 -19.557 1 105.33 ? O1 ONS 401 E 1 
HETATM 20 C C11 ONS . . . M 2 -6.315 34.469 -19.445 1 104.85 ? C11 ONS 401 E 1 
HETATM 21 N N1 ONS . . . M 2 -6.958 34.867 -21.805 1 117.48 ? N1 ONS 401 E 1 
HETATM 22 C C8 ONS . . . M 2 -7.859 35.849 -21.709 1 131.07 ? C8 ONS 401 E 1 
HETATM 23 O O ONS . . . M 2 -8.561 35.996 -20.717 1 139.17 ? O ONS 401 E 1 
HETATM 24 C C6 ONS . . . M 2 -8.071 36.777 -22.85 1 132.87 ? C6 ONS 401 E 1 
HETATM 25 C C7 ONS . . . M 2 -8.057 36.451 -24.192 1 129.14 ? C7 ONS 401 E 1 
HETATM 26 N N ONS . . . M 2 -8.339 38.098 -22.735 1 132.98 ? N ONS 401 E 1 
HETATM 27 C C25 ONS . . . M 2 -8.443 38.829 -21.441 1 132.83 ? C25 ONS 401 E 1 
HETATM 28 C C5 ONS . . . M 2 -8.492 38.661 -23.948 1 130.43 ? C5 ONS 401 E 1 
HETATM 29 C C ONS . . . M 2 -8.767 39.964 -24.345 1 132.61 ? C ONS 401 E 1 
HETATM 30 C C1 ONS . . . M 2 -8.872 40.259 -25.696 1 133.94 ? C1 ONS 401 E 1 
HETATM 31 C C4 ONS . . . M 2 -8.322 37.655 -24.886 1 128.98 ? C4 ONS 401 E 1 
HETATM 32 C C3 ONS . . . M 2 -8.424 37.962 -26.237 1 132.34 ? C3 ONS 401 E 1 
HETATM 33 CL CL ONS . . . M 2 -8.215 36.752 -27.543 1 140.92 ? CL ONS 401 E 1 
HETATM 34 C C2 ONS . . . M 2 -8.699 39.249 -26.63 1 133.5 ? C2 ONS 401 E 1 
HETATM 35 CL CL1 ONS . . . M 2 -8.825 39.567 -28.385 1 140.39 ? CL1 ONS 401 E 1 
#
_model_server_stats.io_time_ms              63 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           35 
#