data_6PMZ
#
_model_server_result.job_id            CACr9v0KiRqIM2m6KbXWdA 
_model_server_result.datetime_utc      '2024-11-24 15:00:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6pmz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":803}' 
#
_entry.id    6PMZ 
#
_exptl.entry_id    6PMZ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              264.325 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            7-[5-(aminomethyl)pyridin-3-yl]-4-methylquinolin-2-amine 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6PMZ 
_cell.length_a            51.435 
_cell.length_b            110.867 
_cell.length_c            164.375 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6PMZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 30 A CYS 326 1_555 G ZN ZN . A ZN 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? 
metalc ? metalc2 A SG CYS 35 A CYS 331 1_555 G ZN ZN . A ZN 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? 
metalc ? metalc3 A SG CYS 119 A CYS 415 1_555 C FE HEM . A HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? 
metalc ? metalc4 G ZN ZN . A ZN 805 1_555 B SG CYS 30 B CYS 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? 
metalc ? metalc5 G ZN ZN . A ZN 805 1_555 B SG CYS 35 B CYS 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.437 ? 
metalc ? metalc6 B SG CYS 119 B CYS 415 1_555 H FE HEM . B HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? 
#
_chem_comp.formula           'C16 H16 N4' 
_chem_comp.formula_weight    264.325 
_chem_comp.id                OUA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              7-[5-(aminomethyl)pyridin-3-yl]-4-methylquinolin-2-amine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N28 C27 OUA sing 358 n n 
N21 C22 OUA doub 359 n y 
N21 C26 OUA sing 360 n y 
C22 C23 OUA sing 361 n y 
C26 C25 OUA doub 362 n y 
C23 C27 OUA sing 363 n n 
C23 C24 OUA doub 364 n y 
C25 C24 OUA sing 365 n y 
C25 C08 OUA sing 366 n n 
C09 C08 OUA doub 367 n y 
C09 C10 OUA sing 368 n y 
C08 C07 OUA sing 369 n y 
N01 C10 OUA doub 370 n y 
N01 C02 OUA sing 371 n y 
C10 C05 OUA sing 372 n y 
N02 C02 OUA sing 373 n n 
C02 C03 OUA doub 374 n y 
C07 C06 OUA doub 375 n y 
C05 C06 OUA sing 376 n y 
C05 C04 OUA doub 377 n y 
C03 C04 OUA sing 378 n y 
C04 C11 OUA sing 379 n n 
C11 H1 OUA sing 380 n n 
C11 H2 OUA sing 381 n n 
C11 H3 OUA sing 382 n n 
N28 H4 OUA sing 383 n n 
N28 H5 OUA sing 384 n n 
C27 H7 OUA sing 385 n n 
C27 H8 OUA sing 386 n n 
C22 H9 OUA sing 387 n n 
C24 H10 OUA sing 388 n n 
C26 H11 OUA sing 389 n n 
C09 H12 OUA sing 390 n n 
C07 H13 OUA sing 391 n n 
C06 H14 OUA sing 392 n n 
C03 H15 OUA sing 393 n n 
N02 H16 OUA sing 394 n n 
N02 H17 OUA sing 395 n n 
#
_atom_sites.entry_id                     6PMZ 
_atom_sites.fract_transf_matrix[1][1]    0.019442 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00902 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006084 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEM A 1 801 750 HEM HEM . 
D 3 H4B A 1 802 760 H4B BH4 . 
E 4 OUA A 1 803 800 OUA M60 . 
F 5 ACT A 1 804 860 ACT ACT . 
G 6 ZN A 1 805 900 ZN ZN . 
H 2 HEM B 1 801 750 HEM HEM . 
I 3 H4B B 1 802 760 H4B BH4 . 
J 4 OUA B 1 803 800 OUA M60 . 
K 5 ACT B 1 804 860 ACT ACT . 
L 7 HOH A 1 901 61 HOH HOH . 
L 7 HOH A 2 902 81 HOH HOH . 
L 7 HOH A 3 903 49 HOH HOH . 
L 7 HOH A 4 904 39 HOH HOH . 
L 7 HOH A 5 905 137 HOH HOH . 
L 7 HOH A 6 906 142 HOH HOH . 
L 7 HOH A 7 907 78 HOH HOH . 
L 7 HOH A 8 908 65 HOH HOH . 
L 7 HOH A 9 909 2 HOH HOH . 
L 7 HOH A 10 910 85 HOH HOH . 
L 7 HOH A 11 911 12 HOH HOH . 
L 7 HOH A 12 912 77 HOH HOH . 
L 7 HOH A 13 913 42 HOH HOH . 
L 7 HOH A 14 914 141 HOH HOH . 
L 7 HOH A 15 915 11 HOH HOH . 
L 7 HOH A 16 916 14 HOH HOH . 
L 7 HOH A 17 917 90 HOH HOH . 
L 7 HOH A 18 918 35 HOH HOH . 
L 7 HOH A 19 919 29 HOH HOH . 
L 7 HOH A 20 920 51 HOH HOH . 
L 7 HOH A 21 921 31 HOH HOH . 
L 7 HOH A 22 922 62 HOH HOH . 
L 7 HOH A 23 923 34 HOH HOH . 
L 7 HOH A 24 924 140 HOH HOH . 
L 7 HOH A 25 925 86 HOH HOH . 
L 7 HOH A 26 926 26 HOH HOH . 
L 7 HOH A 27 927 66 HOH HOH . 
L 7 HOH A 28 928 132 HOH HOH . 
L 7 HOH A 29 929 69 HOH HOH . 
L 7 HOH A 30 930 133 HOH HOH . 
L 7 HOH A 31 931 67 HOH HOH . 
L 7 HOH A 32 932 15 HOH HOH . 
L 7 HOH A 33 933 79 HOH HOH . 
L 7 HOH A 34 934 83 HOH HOH . 
L 7 HOH A 35 935 21 HOH HOH . 
L 7 HOH A 36 936 52 HOH HOH . 
L 7 HOH A 37 937 19 HOH HOH . 
L 7 HOH A 38 938 64 HOH HOH . 
L 7 HOH A 39 939 136 HOH HOH . 
L 7 HOH A 40 940 117 HOH HOH . 
L 7 HOH A 41 941 139 HOH HOH . 
L 7 HOH A 42 942 6 HOH HOH . 
L 7 HOH A 43 943 46 HOH HOH . 
L 7 HOH A 44 944 74 HOH HOH . 
L 7 HOH A 45 945 53 HOH HOH . 
L 7 HOH A 46 946 10 HOH HOH . 
L 7 HOH A 47 947 134 HOH HOH . 
L 7 HOH A 48 948 71 HOH HOH . 
L 7 HOH A 49 949 82 HOH HOH . 
L 7 HOH A 50 950 116 HOH HOH . 
L 7 HOH A 51 951 54 HOH HOH . 
L 7 HOH A 52 952 23 HOH HOH . 
L 7 HOH A 53 953 50 HOH HOH . 
L 7 HOH A 54 954 70 HOH HOH . 
L 7 HOH A 55 955 48 HOH HOH . 
L 7 HOH A 56 956 72 HOH HOH . 
L 7 HOH A 57 957 40 HOH HOH . 
L 7 HOH A 58 958 5 HOH HOH . 
L 7 HOH A 59 959 75 HOH HOH . 
L 7 HOH A 60 960 36 HOH HOH . 
L 7 HOH A 61 961 45 HOH HOH . 
L 7 HOH A 62 962 68 HOH HOH . 
L 7 HOH A 63 963 73 HOH HOH . 
L 7 HOH A 64 964 135 HOH HOH . 
L 7 HOH A 65 965 80 HOH HOH . 
L 7 HOH A 66 966 76 HOH HOH . 
L 7 HOH A 67 967 63 HOH HOH . 
L 7 HOH A 68 968 138 HOH HOH . 
L 7 HOH A 69 969 130 HOH HOH . 
M 7 HOH B 1 901 112 HOH HOH . 
M 7 HOH B 2 902 95 HOH HOH . 
M 7 HOH B 3 903 55 HOH HOH . 
M 7 HOH B 4 904 87 HOH HOH . 
M 7 HOH B 5 905 99 HOH HOH . 
M 7 HOH B 6 906 88 HOH HOH . 
M 7 HOH B 7 907 114 HOH HOH . 
M 7 HOH B 8 908 110 HOH HOH . 
M 7 HOH B 9 909 58 HOH HOH . 
M 7 HOH B 10 910 128 HOH HOH . 
M 7 HOH B 11 911 148 HOH HOH . 
M 7 HOH B 12 912 84 HOH HOH . 
M 7 HOH B 13 913 106 HOH HOH . 
M 7 HOH B 14 914 122 HOH HOH . 
M 7 HOH B 15 915 13 HOH HOH . 
M 7 HOH B 16 916 9 HOH HOH . 
M 7 HOH B 17 917 109 HOH HOH . 
M 7 HOH B 18 918 151 HOH HOH . 
M 7 HOH B 19 919 149 HOH HOH . 
M 7 HOH B 20 920 103 HOH HOH . 
M 7 HOH B 21 921 16 HOH HOH . 
M 7 HOH B 22 922 1 HOH HOH . 
M 7 HOH B 23 923 4 HOH HOH . 
M 7 HOH B 24 924 96 HOH HOH . 
M 7 HOH B 25 925 144 HOH HOH . 
M 7 HOH B 26 926 118 HOH HOH . 
M 7 HOH B 27 927 7 HOH HOH . 
M 7 HOH B 28 928 33 HOH HOH . 
M 7 HOH B 29 929 102 HOH HOH . 
M 7 HOH B 30 930 3 HOH HOH . 
M 7 HOH B 31 931 154 HOH HOH . 
M 7 HOH B 32 932 145 HOH HOH . 
M 7 HOH B 33 933 131 HOH HOH . 
M 7 HOH B 34 934 124 HOH HOH . 
M 7 HOH B 35 935 111 HOH HOH . 
M 7 HOH B 36 936 93 HOH HOH . 
M 7 HOH B 37 937 105 HOH HOH . 
M 7 HOH B 38 938 43 HOH HOH . 
M 7 HOH B 39 939 125 HOH HOH . 
M 7 HOH B 40 940 150 HOH HOH . 
M 7 HOH B 41 941 37 HOH HOH . 
M 7 HOH B 42 942 104 HOH HOH . 
M 7 HOH B 43 943 94 HOH HOH . 
M 7 HOH B 44 944 97 HOH HOH . 
M 7 HOH B 45 945 126 HOH HOH . 
M 7 HOH B 46 946 100 HOH HOH . 
M 7 HOH B 47 947 153 HOH HOH . 
M 7 HOH B 48 948 108 HOH HOH . 
M 7 HOH B 49 949 41 HOH HOH . 
M 7 HOH B 50 950 8 HOH HOH . 
M 7 HOH B 51 951 47 HOH HOH . 
M 7 HOH B 52 952 28 HOH HOH . 
M 7 HOH B 53 953 120 HOH HOH . 
M 7 HOH B 54 954 32 HOH HOH . 
M 7 HOH B 55 955 113 HOH HOH . 
M 7 HOH B 56 956 115 HOH HOH . 
M 7 HOH B 57 957 25 HOH HOH . 
M 7 HOH B 58 958 152 HOH HOH . 
M 7 HOH B 59 959 127 HOH HOH . 
M 7 HOH B 60 960 89 HOH HOH . 
M 7 HOH B 61 961 24 HOH HOH . 
M 7 HOH B 62 962 22 HOH HOH . 
M 7 HOH B 63 963 101 HOH HOH . 
M 7 HOH B 64 964 44 HOH HOH . 
M 7 HOH B 65 965 92 HOH HOH . 
M 7 HOH B 66 966 20 HOH HOH . 
M 7 HOH B 67 967 38 HOH HOH . 
M 7 HOH B 68 968 60 HOH HOH . 
M 7 HOH B 69 969 17 HOH HOH . 
M 7 HOH B 70 970 91 HOH HOH . 
M 7 HOH B 71 971 57 HOH HOH . 
M 7 HOH B 72 972 123 HOH HOH . 
M 7 HOH B 73 973 119 HOH HOH . 
M 7 HOH B 74 974 27 HOH HOH . 
M 7 HOH B 75 975 30 HOH HOH . 
M 7 HOH B 76 976 143 HOH HOH . 
M 7 HOH B 77 977 129 HOH HOH . 
M 7 HOH B 78 978 18 HOH HOH . 
M 7 HOH B 79 979 59 HOH HOH . 
M 7 HOH B 80 980 146 HOH HOH . 
M 7 HOH B 81 981 121 HOH HOH . 
M 7 HOH B 82 982 107 HOH HOH . 
M 7 HOH B 83 983 147 HOH HOH . 
M 7 HOH B 84 984 56 HOH HOH . 
M 7 HOH B 85 985 98 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C11 OUA . . . J 4 10.277 2.231 61.193 1 86.18 ? C11 OUA 803 B 1 
HETATM 2 C C23 OUA . . . J 4 17.382 4.033 56.652 1 92.85 ? C23 OUA 803 B 1 
HETATM 3 N N28 OUA . . . J 4 18.89 3.293 58.429 1 96.8 ? N28 OUA 803 B 1 
HETATM 4 C C27 OUA . . . J 4 18.781 3.553 56.977 1 95.74 ? C27 OUA 803 B 1 
HETATM 5 C C22 OUA . . . J 4 17.17 5.015 55.692 1 91.23 ? C22 OUA 803 B 1 
HETATM 6 C C24 OUA . . . J 4 16.291 3.5 57.325 1 83.85 ? C24 OUA 803 B 1 
HETATM 7 C C25 OUA . . . J 4 15.006 3.936 57.029 1 75.54 ? C25 OUA 803 B 1 
HETATM 8 C C26 OUA . . . J 4 14.856 4.918 56.069 1 85.98 ? C26 OUA 803 B 1 
HETATM 9 N N21 OUA . . . J 4 15.923 5.429 55.43 1 90.27 ? N21 OUA 803 B 1 
HETATM 10 C C08 OUA . . . J 4 13.915 3.301 57.813 1 70.08 ? C08 OUA 803 B 1 
HETATM 11 C C09 OUA . . . J 4 13.621 1.953 57.63 1 74.48 ? C09 OUA 803 B 1 
HETATM 12 C C07 OUA . . . J 4 13.239 4.023 58.788 1 79.32 ? C07 OUA 803 B 1 
HETATM 13 C C06 OUA . . . J 4 12.265 3.407 59.57 1 81.44 ? C06 OUA 803 B 1 
HETATM 14 C C05 OUA . . . J 4 11.965 2.064 59.369 1 80.88 ? C05 OUA 803 B 1 
HETATM 15 C C04 OUA . . . J 4 10.992 1.444 60.134 1 79.25 ? C04 OUA 803 B 1 
HETATM 16 C C03 OUA . . . J 4 10.7 0.103 59.922 1 65.18 ? C03 OUA 803 B 1 
HETATM 17 C C02 OUA . . . J 4 11.392 -0.597 58.935 1 62.31 ? C02 OUA 803 B 1 
HETATM 18 N N02 OUA . . . J 4 11.125 -1.907 58.702 1 46.57 ? N02 OUA 803 B 1 
HETATM 19 N N01 OUA . . . J 4 12.34 0.028 58.206 1 67.62 ? N01 OUA 803 B 1 
HETATM 20 C C10 OUA . . . J 4 12.638 1.334 58.4 1 77.07 ? C10 OUA 803 B 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           329 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           20 
#