data_6PN1
#
_model_server_result.job_id            jXfywtbotKrnljiy0VyauA 
_model_server_result.datetime_utc      '2024-11-26 22:37:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6pn1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":805}' 
#
_entry.id    6PN1 
#
_exptl.entry_id    6PN1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6PN1 
_cell.length_a            51.665 
_cell.length_b            112.239 
_cell.length_c            163.966 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6PN1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             K 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 30 A CYS 326 1_555 K ZN ZN . B ZN 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? 
metalc ? metalc2 A SG CYS 35 A CYS 331 1_555 K ZN ZN . B ZN 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? 
metalc ? metalc3 A SG CYS 119 A CYS 415 1_555 C FE HEM . A HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? 
metalc ? metalc4 B SG CYS 30 B CYS 326 1_555 K ZN ZN . B ZN 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? 
metalc ? metalc5 B SG CYS 35 B CYS 331 1_555 K ZN ZN . B ZN 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? 
metalc ? metalc6 B SG CYS 119 B CYS 415 1_555 G FE HEM . B HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6PN1 
_atom_sites.fract_transf_matrix[1][1]    0.019355 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00891 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006099 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEM A 1 801 750 HEM HEM . 
D 3 H4B A 1 802 760 H4B BH4 . 
E 4 OSG A 1 803 800 OSG 5M1 . 
F 5 ACT A 1 804 860 ACT ACT . 
G 2 HEM B 1 801 750 HEM HEM . 
H 3 H4B B 1 802 760 H4B BH4 . 
I 4 OSG B 1 803 800 OSG 5M1 . 
J 5 ACT B 1 804 860 ACT ACT . 
K 6 ZN B 1 805 900 ZN ZN . 
L 7 HOH A 1 901 83 HOH HOH . 
L 7 HOH A 2 902 64 HOH HOH . 
L 7 HOH A 3 903 21 HOH HOH . 
L 7 HOH A 4 904 11 HOH HOH . 
L 7 HOH A 5 905 1 HOH HOH . 
L 7 HOH A 6 906 75 HOH HOH . 
L 7 HOH A 7 907 182 HOH HOH . 
L 7 HOH A 8 908 66 HOH HOH . 
L 7 HOH A 9 909 175 HOH HOH . 
L 7 HOH A 10 910 39 HOH HOH . 
L 7 HOH A 11 911 34 HOH HOH . 
L 7 HOH A 12 912 190 HOH HOH . 
L 7 HOH A 13 913 73 HOH HOH . 
L 7 HOH A 14 914 76 HOH HOH . 
L 7 HOH A 15 915 25 HOH HOH . 
L 7 HOH A 16 916 174 HOH HOH . 
L 7 HOH A 17 917 45 HOH HOH . 
L 7 HOH A 18 918 16 HOH HOH . 
L 7 HOH A 19 919 85 HOH HOH . 
L 7 HOH A 20 920 10 HOH HOH . 
L 7 HOH A 21 921 89 HOH HOH . 
L 7 HOH A 22 922 65 HOH HOH . 
L 7 HOH A 23 923 72 HOH HOH . 
L 7 HOH A 24 924 50 HOH HOH . 
L 7 HOH A 25 925 88 HOH HOH . 
L 7 HOH A 26 926 56 HOH HOH . 
L 7 HOH A 27 927 27 HOH HOH . 
L 7 HOH A 28 928 69 HOH HOH . 
L 7 HOH A 29 929 54 HOH HOH . 
L 7 HOH A 30 930 20 HOH HOH . 
L 7 HOH A 31 931 71 HOH HOH . 
L 7 HOH A 32 932 19 HOH HOH . 
L 7 HOH A 33 933 188 HOH HOH . 
L 7 HOH A 34 934 17 HOH HOH . 
L 7 HOH A 35 935 49 HOH HOH . 
L 7 HOH A 36 936 79 HOH HOH . 
L 7 HOH A 37 937 187 HOH HOH . 
L 7 HOH A 38 938 44 HOH HOH . 
L 7 HOH A 39 939 53 HOH HOH . 
L 7 HOH A 40 940 84 HOH HOH . 
L 7 HOH A 41 941 80 HOH HOH . 
L 7 HOH A 42 942 9 HOH HOH . 
L 7 HOH A 43 943 58 HOH HOH . 
L 7 HOH A 44 944 173 HOH HOH . 
L 7 HOH A 45 945 12 HOH HOH . 
L 7 HOH A 46 946 48 HOH HOH . 
L 7 HOH A 47 947 14 HOH HOH . 
L 7 HOH A 48 948 180 HOH HOH . 
L 7 HOH A 49 949 43 HOH HOH . 
L 7 HOH A 50 950 70 HOH HOH . 
L 7 HOH A 51 951 52 HOH HOH . 
L 7 HOH A 52 952 68 HOH HOH . 
L 7 HOH A 53 953 62 HOH HOH . 
L 7 HOH A 54 954 82 HOH HOH . 
L 7 HOH A 55 955 24 HOH HOH . 
L 7 HOH A 56 956 177 HOH HOH . 
L 7 HOH A 57 957 67 HOH HOH . 
L 7 HOH A 58 958 42 HOH HOH . 
L 7 HOH A 59 959 22 HOH HOH . 
L 7 HOH A 60 960 74 HOH HOH . 
L 7 HOH A 61 961 46 HOH HOH . 
L 7 HOH A 62 962 13 HOH HOH . 
L 7 HOH A 63 963 81 HOH HOH . 
L 7 HOH A 64 964 61 HOH HOH . 
L 7 HOH A 65 965 178 HOH HOH . 
L 7 HOH A 66 966 176 HOH HOH . 
L 7 HOH A 67 967 15 HOH HOH . 
L 7 HOH A 68 968 183 HOH HOH . 
L 7 HOH A 69 969 33 HOH HOH . 
L 7 HOH A 70 970 77 HOH HOH . 
L 7 HOH A 71 971 18 HOH HOH . 
L 7 HOH A 72 972 181 HOH HOH . 
L 7 HOH A 73 973 184 HOH HOH . 
L 7 HOH A 74 974 86 HOH HOH . 
L 7 HOH A 75 975 179 HOH HOH . 
L 7 HOH A 76 976 31 HOH HOH . 
L 7 HOH A 77 977 63 HOH HOH . 
L 7 HOH A 78 978 32 HOH HOH . 
L 7 HOH A 79 979 47 HOH HOH . 
L 7 HOH A 80 980 51 HOH HOH . 
L 7 HOH A 81 981 78 HOH HOH . 
L 7 HOH A 82 982 23 HOH HOH . 
L 7 HOH A 83 983 35 HOH HOH . 
L 7 HOH A 84 984 55 HOH HOH . 
M 7 HOH B 1 901 142 HOH HOH . 
M 7 HOH B 2 902 159 HOH HOH . 
M 7 HOH B 3 903 195 HOH HOH . 
M 7 HOH B 4 904 110 HOH HOH . 
M 7 HOH B 5 905 104 HOH HOH . 
M 7 HOH B 6 906 170 HOH HOH . 
M 7 HOH B 7 907 125 HOH HOH . 
M 7 HOH B 8 908 36 HOH HOH . 
M 7 HOH B 9 909 26 HOH HOH . 
M 7 HOH B 10 910 2 HOH HOH . 
M 7 HOH B 11 911 28 HOH HOH . 
M 7 HOH B 12 912 146 HOH HOH . 
M 7 HOH B 13 913 130 HOH HOH . 
M 7 HOH B 14 914 127 HOH HOH . 
M 7 HOH B 15 915 99 HOH HOH . 
M 7 HOH B 16 916 143 HOH HOH . 
M 7 HOH B 17 917 30 HOH HOH . 
M 7 HOH B 18 918 118 HOH HOH . 
M 7 HOH B 19 919 164 HOH HOH . 
M 7 HOH B 20 920 37 HOH HOH . 
M 7 HOH B 21 921 4 HOH HOH . 
M 7 HOH B 22 922 108 HOH HOH . 
M 7 HOH B 23 923 6 HOH HOH . 
M 7 HOH B 24 924 155 HOH HOH . 
M 7 HOH B 25 925 29 HOH HOH . 
M 7 HOH B 26 926 107 HOH HOH . 
M 7 HOH B 27 927 141 HOH HOH . 
M 7 HOH B 28 928 161 HOH HOH . 
M 7 HOH B 29 929 59 HOH HOH . 
M 7 HOH B 30 930 41 HOH HOH . 
M 7 HOH B 31 931 144 HOH HOH . 
M 7 HOH B 32 932 132 HOH HOH . 
M 7 HOH B 33 933 95 HOH HOH . 
M 7 HOH B 34 934 147 HOH HOH . 
M 7 HOH B 35 935 126 HOH HOH . 
M 7 HOH B 36 936 129 HOH HOH . 
M 7 HOH B 37 937 135 HOH HOH . 
M 7 HOH B 38 938 94 HOH HOH . 
M 7 HOH B 39 939 193 HOH HOH . 
M 7 HOH B 40 940 123 HOH HOH . 
M 7 HOH B 41 941 145 HOH HOH . 
M 7 HOH B 42 942 117 HOH HOH . 
M 7 HOH B 43 943 128 HOH HOH . 
M 7 HOH B 44 944 91 HOH HOH . 
M 7 HOH B 45 945 134 HOH HOH . 
M 7 HOH B 46 946 111 HOH HOH . 
M 7 HOH B 47 947 5 HOH HOH . 
M 7 HOH B 48 948 8 HOH HOH . 
M 7 HOH B 49 949 152 HOH HOH . 
M 7 HOH B 50 950 139 HOH HOH . 
M 7 HOH B 51 951 98 HOH HOH . 
M 7 HOH B 52 952 138 HOH HOH . 
M 7 HOH B 53 953 136 HOH HOH . 
M 7 HOH B 54 954 7 HOH HOH . 
M 7 HOH B 55 955 163 HOH HOH . 
M 7 HOH B 56 956 166 HOH HOH . 
M 7 HOH B 57 957 148 HOH HOH . 
M 7 HOH B 58 958 90 HOH HOH . 
M 7 HOH B 59 959 154 HOH HOH . 
M 7 HOH B 60 960 40 HOH HOH . 
M 7 HOH B 61 961 133 HOH HOH . 
M 7 HOH B 62 962 158 HOH HOH . 
M 7 HOH B 63 963 109 HOH HOH . 
M 7 HOH B 64 964 137 HOH HOH . 
M 7 HOH B 65 965 196 HOH HOH . 
M 7 HOH B 66 966 171 HOH HOH . 
M 7 HOH B 67 967 167 HOH HOH . 
M 7 HOH B 68 968 162 HOH HOH . 
M 7 HOH B 69 969 156 HOH HOH . 
M 7 HOH B 70 970 172 HOH HOH . 
M 7 HOH B 71 971 131 HOH HOH . 
M 7 HOH B 72 972 87 HOH HOH . 
M 7 HOH B 73 973 151 HOH HOH . 
M 7 HOH B 74 974 198 HOH HOH . 
M 7 HOH B 75 975 200 HOH HOH . 
M 7 HOH B 76 976 194 HOH HOH . 
M 7 HOH B 77 977 191 HOH HOH . 
M 7 HOH B 78 978 121 HOH HOH . 
M 7 HOH B 79 979 93 HOH HOH . 
M 7 HOH B 80 980 149 HOH HOH . 
M 7 HOH B 81 981 106 HOH HOH . 
M 7 HOH B 82 982 96 HOH HOH . 
M 7 HOH B 83 983 60 HOH HOH . 
M 7 HOH B 84 984 157 HOH HOH . 
M 7 HOH B 85 985 97 HOH HOH . 
M 7 HOH B 86 986 150 HOH HOH . 
M 7 HOH B 87 987 189 HOH HOH . 
M 7 HOH B 88 988 105 HOH HOH . 
M 7 HOH B 89 989 119 HOH HOH . 
M 7 HOH B 90 990 112 HOH HOH . 
M 7 HOH B 91 991 153 HOH HOH . 
M 7 HOH B 92 992 100 HOH HOH . 
M 7 HOH B 93 993 114 HOH HOH . 
M 7 HOH B 94 994 197 HOH HOH . 
M 7 HOH B 95 995 169 HOH HOH . 
M 7 HOH B 96 996 120 HOH HOH . 
M 7 HOH B 97 997 185 HOH HOH . 
M 7 HOH B 98 998 92 HOH HOH . 
M 7 HOH B 99 999 3 HOH HOH . 
M 7 HOH B 100 1000 168 HOH HOH . 
M 7 HOH B 101 1001 57 HOH HOH . 
M 7 HOH B 102 1002 38 HOH HOH . 
M 7 HOH B 103 1003 113 HOH HOH . 
M 7 HOH B 104 1004 103 HOH HOH . 
M 7 HOH B 105 1005 160 HOH HOH . 
M 7 HOH B 106 1006 101 HOH HOH . 
M 7 HOH B 107 1007 165 HOH HOH . 
M 7 HOH B 108 1008 124 HOH HOH . 
M 7 HOH B 109 1009 140 HOH HOH . 
M 7 HOH B 110 1010 116 HOH HOH . 
M 7 HOH B 111 1011 192 HOH HOH . 
M 7 HOH B 112 1012 122 HOH HOH . 
M 7 HOH B 113 1013 102 HOH HOH . 
M 7 HOH B 114 1014 199 HOH HOH . 
M 7 HOH B 115 1015 186 HOH HOH . 
M 7 HOH B 116 1016 115 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         K 
_atom_site.label_entity_id       6 
_atom_site.Cartn_x               8.916 
_atom_site.Cartn_y               16.306 
_atom_site.Cartn_z               41.303 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        50.4 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           805 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              23 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#