data_6PND
#
_model_server_result.job_id            XJ8tifpraUx7LShGTnsGVg 
_model_server_result.datetime_utc      '2024-11-08 19:58:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6pnd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":804}' 
#
_entry.id    6PND 
#
_exptl.entry_id    6PND 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6PND 
_cell.length_a            52.234 
_cell.length_b            122.302 
_cell.length_c            165.291 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6PND 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 30 A CYS 331 1_555 F ZN ZN . A ZN 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? 
metalc ? metalc2 A SG CYS 35 A CYS 336 1_555 F ZN ZN . A ZN 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? 
metalc ? metalc3 A SG CYS 119 A CYS 420 1_555 C FE HEM . A HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? 
metalc ? metalc4 F ZN ZN . A ZN 804 1_555 B SG CYS 30 B CYS 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? 
metalc ? metalc5 F ZN ZN . A ZN 804 1_555 B SG CYS 35 B CYS 336 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? 
metalc ? metalc6 B SG CYS 119 B CYS 420 1_555 G FE HEM . B HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6PND 
_atom_sites.fract_transf_matrix[1][1]    0.019145 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008176 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00605 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEM A 1 801 750 HEM HEM . 
D 3 H4B A 1 802 760 H4B BH4 . 
E 4 OT4 A 1 803 800 OT4 M56 . 
F 5 ZN A 1 804 900 ZN ZN . 
G 2 HEM B 1 801 750 HEM HEM . 
H 3 H4B B 1 802 760 H4B BH4 . 
I 4 OT4 B 1 803 800 OT4 M56 . 
J 6 HOH A 1 901 126 HOH HOH . 
J 6 HOH A 2 902 78 HOH HOH . 
J 6 HOH A 3 903 125 HOH HOH . 
J 6 HOH A 4 904 4 HOH HOH . 
J 6 HOH A 5 905 88 HOH HOH . 
J 6 HOH A 6 906 93 HOH HOH . 
J 6 HOH A 7 907 96 HOH HOH . 
J 6 HOH A 8 908 61 HOH HOH . 
J 6 HOH A 9 909 57 HOH HOH . 
J 6 HOH A 10 910 139 HOH HOH . 
J 6 HOH A 11 911 90 HOH HOH . 
J 6 HOH A 12 912 111 HOH HOH . 
J 6 HOH A 13 913 97 HOH HOH . 
J 6 HOH A 14 914 121 HOH HOH . 
J 6 HOH A 15 915 92 HOH HOH . 
J 6 HOH A 16 916 100 HOH HOH . 
J 6 HOH A 17 917 82 HOH HOH . 
J 6 HOH A 18 918 56 HOH HOH . 
J 6 HOH A 19 919 102 HOH HOH . 
J 6 HOH A 20 920 133 HOH HOH . 
J 6 HOH A 21 921 119 HOH HOH . 
J 6 HOH A 22 922 105 HOH HOH . 
J 6 HOH A 23 923 106 HOH HOH . 
J 6 HOH A 24 924 3 HOH HOH . 
J 6 HOH A 25 925 43 HOH HOH . 
J 6 HOH A 26 926 117 HOH HOH . 
J 6 HOH A 27 927 58 HOH HOH . 
J 6 HOH A 28 928 60 HOH HOH . 
J 6 HOH A 29 929 109 HOH HOH . 
J 6 HOH A 30 930 2 HOH HOH . 
J 6 HOH A 31 931 108 HOH HOH . 
J 6 HOH A 32 932 13 HOH HOH . 
J 6 HOH A 33 933 62 HOH HOH . 
J 6 HOH A 34 934 33 HOH HOH . 
J 6 HOH A 35 935 83 HOH HOH . 
J 6 HOH A 36 936 27 HOH HOH . 
J 6 HOH A 37 937 122 HOH HOH . 
J 6 HOH A 38 938 36 HOH HOH . 
J 6 HOH A 39 939 22 HOH HOH . 
J 6 HOH A 40 940 47 HOH HOH . 
J 6 HOH A 41 941 29 HOH HOH . 
J 6 HOH A 42 942 55 HOH HOH . 
J 6 HOH A 43 943 179 HOH HOH . 
J 6 HOH A 44 944 104 HOH HOH . 
J 6 HOH A 45 945 110 HOH HOH . 
J 6 HOH A 46 946 112 HOH HOH . 
J 6 HOH A 47 947 30 HOH HOH . 
J 6 HOH A 48 948 89 HOH HOH . 
J 6 HOH A 49 949 44 HOH HOH . 
J 6 HOH A 50 950 11 HOH HOH . 
J 6 HOH A 51 951 140 HOH HOH . 
J 6 HOH A 52 952 51 HOH HOH . 
J 6 HOH A 53 953 138 HOH HOH . 
J 6 HOH A 54 954 103 HOH HOH . 
J 6 HOH A 55 955 15 HOH HOH . 
J 6 HOH A 56 956 23 HOH HOH . 
J 6 HOH A 57 957 24 HOH HOH . 
J 6 HOH A 58 958 34 HOH HOH . 
J 6 HOH A 59 959 118 HOH HOH . 
J 6 HOH A 60 960 87 HOH HOH . 
J 6 HOH A 61 961 63 HOH HOH . 
J 6 HOH A 62 962 123 HOH HOH . 
J 6 HOH A 63 963 53 HOH HOH . 
J 6 HOH A 64 964 91 HOH HOH . 
J 6 HOH A 65 965 84 HOH HOH . 
J 6 HOH A 66 966 1 HOH HOH . 
J 6 HOH A 67 967 75 HOH HOH . 
J 6 HOH A 68 968 26 HOH HOH . 
J 6 HOH A 69 969 114 HOH HOH . 
J 6 HOH A 70 970 37 HOH HOH . 
J 6 HOH A 71 971 94 HOH HOH . 
J 6 HOH A 72 972 132 HOH HOH . 
J 6 HOH A 73 973 14 HOH HOH . 
J 6 HOH A 74 974 127 HOH HOH . 
J 6 HOH A 75 975 128 HOH HOH . 
J 6 HOH A 76 976 64 HOH HOH . 
J 6 HOH A 77 977 21 HOH HOH . 
J 6 HOH A 78 978 99 HOH HOH . 
J 6 HOH A 79 979 141 HOH HOH . 
J 6 HOH A 80 980 115 HOH HOH . 
J 6 HOH A 81 981 107 HOH HOH . 
J 6 HOH A 82 982 79 HOH HOH . 
J 6 HOH A 83 983 124 HOH HOH . 
J 6 HOH A 84 984 129 HOH HOH . 
J 6 HOH A 85 985 17 HOH HOH . 
J 6 HOH A 86 986 66 HOH HOH . 
J 6 HOH A 87 987 28 HOH HOH . 
J 6 HOH A 88 988 35 HOH HOH . 
J 6 HOH A 89 989 25 HOH HOH . 
J 6 HOH A 90 990 85 HOH HOH . 
J 6 HOH A 91 991 5 HOH HOH . 
J 6 HOH A 92 992 98 HOH HOH . 
J 6 HOH A 93 993 38 HOH HOH . 
J 6 HOH A 94 994 59 HOH HOH . 
J 6 HOH A 95 995 120 HOH HOH . 
J 6 HOH A 96 996 143 HOH HOH . 
J 6 HOH A 97 997 86 HOH HOH . 
J 6 HOH A 98 998 113 HOH HOH . 
J 6 HOH A 99 999 80 HOH HOH . 
J 6 HOH A 100 1000 116 HOH HOH . 
J 6 HOH A 101 1001 74 HOH HOH . 
J 6 HOH A 102 1002 31 HOH HOH . 
J 6 HOH A 103 1003 134 HOH HOH . 
J 6 HOH A 104 1004 101 HOH HOH . 
J 6 HOH A 105 1005 142 HOH HOH . 
J 6 HOH A 106 1006 76 HOH HOH . 
J 6 HOH A 107 1007 50 HOH HOH . 
J 6 HOH A 108 1008 81 HOH HOH . 
J 6 HOH A 109 1009 95 HOH HOH . 
J 6 HOH A 110 1010 77 HOH HOH . 
J 6 HOH A 111 1011 176 HOH HOH . 
K 6 HOH B 1 901 199 HOH HOH . 
K 6 HOH B 2 902 41 HOH HOH . 
K 6 HOH B 3 903 193 HOH HOH . 
K 6 HOH B 4 904 164 HOH HOH . 
K 6 HOH B 5 905 65 HOH HOH . 
K 6 HOH B 6 906 182 HOH HOH . 
K 6 HOH B 7 907 72 HOH HOH . 
K 6 HOH B 8 908 162 HOH HOH . 
K 6 HOH B 9 909 189 HOH HOH . 
K 6 HOH B 10 910 160 HOH HOH . 
K 6 HOH B 11 911 163 HOH HOH . 
K 6 HOH B 12 912 192 HOH HOH . 
K 6 HOH B 13 913 178 HOH HOH . 
K 6 HOH B 14 914 67 HOH HOH . 
K 6 HOH B 15 915 131 HOH HOH . 
K 6 HOH B 16 916 7 HOH HOH . 
K 6 HOH B 17 917 135 HOH HOH . 
K 6 HOH B 18 918 68 HOH HOH . 
K 6 HOH B 19 919 45 HOH HOH . 
K 6 HOH B 20 920 167 HOH HOH . 
K 6 HOH B 21 921 187 HOH HOH . 
K 6 HOH B 22 922 197 HOH HOH . 
K 6 HOH B 23 923 185 HOH HOH . 
K 6 HOH B 24 924 159 HOH HOH . 
K 6 HOH B 25 925 130 HOH HOH . 
K 6 HOH B 26 926 181 HOH HOH . 
K 6 HOH B 27 927 149 HOH HOH . 
K 6 HOH B 28 928 157 HOH HOH . 
K 6 HOH B 29 929 150 HOH HOH . 
K 6 HOH B 30 930 48 HOH HOH . 
K 6 HOH B 31 931 10 HOH HOH . 
K 6 HOH B 32 932 161 HOH HOH . 
K 6 HOH B 33 933 9 HOH HOH . 
K 6 HOH B 34 934 8 HOH HOH . 
K 6 HOH B 35 935 191 HOH HOH . 
K 6 HOH B 36 936 188 HOH HOH . 
K 6 HOH B 37 937 165 HOH HOH . 
K 6 HOH B 38 938 144 HOH HOH . 
K 6 HOH B 39 939 190 HOH HOH . 
K 6 HOH B 40 940 71 HOH HOH . 
K 6 HOH B 41 941 171 HOH HOH . 
K 6 HOH B 42 942 166 HOH HOH . 
K 6 HOH B 43 943 148 HOH HOH . 
K 6 HOH B 44 944 19 HOH HOH . 
K 6 HOH B 45 945 201 HOH HOH . 
K 6 HOH B 46 946 70 HOH HOH . 
K 6 HOH B 47 947 151 HOH HOH . 
K 6 HOH B 48 948 32 HOH HOH . 
K 6 HOH B 49 949 137 HOH HOH . 
K 6 HOH B 50 950 174 HOH HOH . 
K 6 HOH B 51 951 183 HOH HOH . 
K 6 HOH B 52 952 54 HOH HOH . 
K 6 HOH B 53 953 194 HOH HOH . 
K 6 HOH B 54 954 12 HOH HOH . 
K 6 HOH B 55 955 170 HOH HOH . 
K 6 HOH B 56 956 52 HOH HOH . 
K 6 HOH B 57 957 49 HOH HOH . 
K 6 HOH B 58 958 20 HOH HOH . 
K 6 HOH B 59 959 18 HOH HOH . 
K 6 HOH B 60 960 173 HOH HOH . 
K 6 HOH B 61 961 42 HOH HOH . 
K 6 HOH B 62 962 69 HOH HOH . 
K 6 HOH B 63 963 16 HOH HOH . 
K 6 HOH B 64 964 198 HOH HOH . 
K 6 HOH B 65 965 39 HOH HOH . 
K 6 HOH B 66 966 177 HOH HOH . 
K 6 HOH B 67 967 73 HOH HOH . 
K 6 HOH B 68 968 156 HOH HOH . 
K 6 HOH B 69 969 172 HOH HOH . 
K 6 HOH B 70 970 195 HOH HOH . 
K 6 HOH B 71 971 158 HOH HOH . 
K 6 HOH B 72 972 145 HOH HOH . 
K 6 HOH B 73 973 155 HOH HOH . 
K 6 HOH B 74 974 6 HOH HOH . 
K 6 HOH B 75 975 180 HOH HOH . 
K 6 HOH B 76 976 169 HOH HOH . 
K 6 HOH B 77 977 196 HOH HOH . 
K 6 HOH B 78 978 147 HOH HOH . 
K 6 HOH B 79 979 46 HOH HOH . 
K 6 HOH B 80 980 184 HOH HOH . 
K 6 HOH B 81 981 175 HOH HOH . 
K 6 HOH B 82 982 186 HOH HOH . 
K 6 HOH B 83 983 202 HOH HOH . 
K 6 HOH B 84 984 152 HOH HOH . 
K 6 HOH B 85 985 168 HOH HOH . 
K 6 HOH B 86 986 153 HOH HOH . 
K 6 HOH B 87 987 136 HOH HOH . 
K 6 HOH B 88 988 200 HOH HOH . 
K 6 HOH B 89 989 154 HOH HOH . 
K 6 HOH B 90 990 146 HOH HOH . 
K 6 HOH B 91 991 40 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         F 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               113.793 
_atom_site.Cartn_y               260.269 
_atom_site.Cartn_z               342.945 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        50.34 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           804 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           1 
#