data_6PQ8 # _model_server_result.job_id 2xgwPoBVZ_red378A_wA6A _model_server_result.datetime_utc '2024-11-05 21:22:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6pq8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":308}' # _entry.id 6PQ8 # _exptl.entry_id 6PQ8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6PQ8 _cell.length_a 99.41 _cell.length_b 99.41 _cell.length_c 99.47 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PQ8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 I N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 135 n n C1 C2 GOL sing 136 n n C1 H11 GOL sing 137 n n C1 H12 GOL sing 138 n n O1 HO1 GOL sing 139 n n C2 O2 GOL sing 140 n n C2 C3 GOL sing 141 n n C2 H2 GOL sing 142 n n O2 HO2 GOL sing 143 n n C3 O3 GOL sing 144 n n C3 H31 GOL sing 145 n n C3 H32 GOL sing 146 n n O3 HO3 GOL sing 147 n n # _atom_sites.entry_id 6PQ8 _atom_sites.fract_transf_matrix[1][1] 0.010059 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010059 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010053 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ASP A 1 301 292 ASP ASP . C 3 J01 A 1 302 302 J01 LIG . D 4 ACT A 1 303 401 ACT ACT . E 5 GOL A 1 304 501 GOL GOL . F 4 ACT A 1 305 601 ACT ACT . G 4 ACT A 1 306 701 ACT ACT . H 4 ACT A 1 307 801 ACT ACT . I 5 GOL A 1 308 901 GOL GOL . J 4 ACT A 1 309 1001 ACT ACT . K 4 ACT A 1 310 1101 ACT ACT . L 4 ACT A 1 311 1201 ACT ACT . M 4 ACT A 1 312 201 ACT ACT . N 6 SO4 A 1 313 1 SO4 SO4 . O 6 SO4 A 1 314 2 SO4 SO4 . P 6 SO4 A 1 315 3 SO4 SO4 . Q 6 SO4 A 1 316 4 SO4 SO4 . R 7 CL A 1 317 1 CL CL . S 8 HOH A 1 401 182 HOH HOH . S 8 HOH A 2 402 195 HOH HOH . S 8 HOH A 3 403 159 HOH HOH . S 8 HOH A 4 404 88 HOH HOH . S 8 HOH A 5 405 93 HOH HOH . S 8 HOH A 6 406 192 HOH HOH . S 8 HOH A 7 407 81 HOH HOH . S 8 HOH A 8 408 17 HOH HOH . S 8 HOH A 9 409 146 HOH HOH . S 8 HOH A 10 410 161 HOH HOH . S 8 HOH A 11 411 64 HOH HOH . S 8 HOH A 12 412 73 HOH HOH . S 8 HOH A 13 413 114 HOH HOH . S 8 HOH A 14 414 189 HOH HOH . S 8 HOH A 15 415 25 HOH HOH . S 8 HOH A 16 416 119 HOH HOH . S 8 HOH A 17 417 19 HOH HOH . S 8 HOH A 18 418 22 HOH HOH . S 8 HOH A 19 419 116 HOH HOH . S 8 HOH A 20 420 59 HOH HOH . S 8 HOH A 21 421 53 HOH HOH . S 8 HOH A 22 422 12 HOH HOH . S 8 HOH A 23 423 180 HOH HOH . S 8 HOH A 24 424 5 HOH HOH . S 8 HOH A 25 425 10 HOH HOH . S 8 HOH A 26 426 11 HOH HOH . S 8 HOH A 27 427 6 HOH HOH . S 8 HOH A 28 428 18 HOH HOH . S 8 HOH A 29 429 42 HOH HOH . S 8 HOH A 30 430 137 HOH HOH . S 8 HOH A 31 431 101 HOH HOH . S 8 HOH A 32 432 123 HOH HOH . S 8 HOH A 33 433 52 HOH HOH . S 8 HOH A 34 434 104 HOH HOH . S 8 HOH A 35 435 56 HOH HOH . S 8 HOH A 36 436 28 HOH HOH . S 8 HOH A 37 437 48 HOH HOH . S 8 HOH A 38 438 99 HOH HOH . S 8 HOH A 39 439 156 HOH HOH . S 8 HOH A 40 440 187 HOH HOH . S 8 HOH A 41 441 148 HOH HOH . S 8 HOH A 42 442 69 HOH HOH . S 8 HOH A 43 443 8 HOH HOH . S 8 HOH A 44 444 15 HOH HOH . S 8 HOH A 45 445 124 HOH HOH . S 8 HOH A 46 446 63 HOH HOH . S 8 HOH A 47 447 43 HOH HOH . S 8 HOH A 48 448 41 HOH HOH . S 8 HOH A 49 449 32 HOH HOH . S 8 HOH A 50 450 44 HOH HOH . S 8 HOH A 51 451 49 HOH HOH . S 8 HOH A 52 452 68 HOH HOH . S 8 HOH A 53 453 23 HOH HOH . S 8 HOH A 54 454 38 HOH HOH . S 8 HOH A 55 455 31 HOH HOH . S 8 HOH A 56 456 2 HOH HOH . S 8 HOH A 57 457 173 HOH HOH . S 8 HOH A 58 458 57 HOH HOH . S 8 HOH A 59 459 96 HOH HOH . S 8 HOH A 60 460 181 HOH HOH . S 8 HOH A 61 461 147 HOH HOH . S 8 HOH A 62 462 29 HOH HOH . S 8 HOH A 63 463 26 HOH HOH . S 8 HOH A 64 464 65 HOH HOH . S 8 HOH A 65 465 76 HOH HOH . S 8 HOH A 66 466 27 HOH HOH . S 8 HOH A 67 467 45 HOH HOH . S 8 HOH A 68 468 79 HOH HOH . S 8 HOH A 69 469 40 HOH HOH . S 8 HOH A 70 470 71 HOH HOH . S 8 HOH A 71 471 20 HOH HOH . S 8 HOH A 72 472 1 HOH HOH . S 8 HOH A 73 473 47 HOH HOH . S 8 HOH A 74 474 67 HOH HOH . S 8 HOH A 75 475 84 HOH HOH . S 8 HOH A 76 476 4 HOH HOH . S 8 HOH A 77 477 24 HOH HOH . S 8 HOH A 78 478 74 HOH HOH . S 8 HOH A 79 479 125 HOH HOH . S 8 HOH A 80 480 75 HOH HOH . S 8 HOH A 81 481 112 HOH HOH . S 8 HOH A 82 482 102 HOH HOH . S 8 HOH A 83 483 61 HOH HOH . S 8 HOH A 84 484 14 HOH HOH . S 8 HOH A 85 485 9 HOH HOH . S 8 HOH A 86 486 30 HOH HOH . S 8 HOH A 87 487 98 HOH HOH . S 8 HOH A 88 488 140 HOH HOH . S 8 HOH A 89 489 13 HOH HOH . S 8 HOH A 90 490 143 HOH HOH . S 8 HOH A 91 491 130 HOH HOH . S 8 HOH A 92 492 90 HOH HOH . S 8 HOH A 93 493 191 HOH HOH . S 8 HOH A 94 494 91 HOH HOH . S 8 HOH A 95 495 185 HOH HOH . S 8 HOH A 96 496 66 HOH HOH . S 8 HOH A 97 497 3 HOH HOH . S 8 HOH A 98 498 7 HOH HOH . S 8 HOH A 99 499 168 HOH HOH . S 8 HOH A 100 500 37 HOH HOH . S 8 HOH A 101 501 150 HOH HOH . S 8 HOH A 102 502 179 HOH HOH . S 8 HOH A 103 503 60 HOH HOH . S 8 HOH A 104 504 86 HOH HOH . S 8 HOH A 105 505 50 HOH HOH . S 8 HOH A 106 506 16 HOH HOH . S 8 HOH A 107 507 94 HOH HOH . S 8 HOH A 108 508 152 HOH HOH . S 8 HOH A 109 509 36 HOH HOH . S 8 HOH A 110 510 133 HOH HOH . S 8 HOH A 111 511 82 HOH HOH . S 8 HOH A 112 512 151 HOH HOH . S 8 HOH A 113 513 122 HOH HOH . S 8 HOH A 114 514 158 HOH HOH . S 8 HOH A 115 515 89 HOH HOH . S 8 HOH A 116 516 126 HOH HOH . S 8 HOH A 117 517 33 HOH HOH . S 8 HOH A 118 518 115 HOH HOH . S 8 HOH A 119 519 162 HOH HOH . S 8 HOH A 120 520 70 HOH HOH . S 8 HOH A 121 521 77 HOH HOH . S 8 HOH A 122 522 171 HOH HOH . S 8 HOH A 123 523 55 HOH HOH . S 8 HOH A 124 524 184 HOH HOH . S 8 HOH A 125 525 110 HOH HOH . S 8 HOH A 126 526 58 HOH HOH . S 8 HOH A 127 527 169 HOH HOH . S 8 HOH A 128 528 160 HOH HOH . S 8 HOH A 129 529 164 HOH HOH . S 8 HOH A 130 530 118 HOH HOH . S 8 HOH A 131 531 87 HOH HOH . S 8 HOH A 132 532 80 HOH HOH . S 8 HOH A 133 533 111 HOH HOH . S 8 HOH A 134 534 190 HOH HOH . S 8 HOH A 135 535 134 HOH HOH . S 8 HOH A 136 536 35 HOH HOH . S 8 HOH A 137 537 106 HOH HOH . S 8 HOH A 138 538 92 HOH HOH . S 8 HOH A 139 539 39 HOH HOH . S 8 HOH A 140 540 62 HOH HOH . S 8 HOH A 141 541 100 HOH HOH . S 8 HOH A 142 542 135 HOH HOH . S 8 HOH A 143 543 51 HOH HOH . S 8 HOH A 144 544 131 HOH HOH . S 8 HOH A 145 545 183 HOH HOH . S 8 HOH A 146 546 113 HOH HOH . S 8 HOH A 147 547 193 HOH HOH . S 8 HOH A 148 548 145 HOH HOH . S 8 HOH A 149 549 142 HOH HOH . S 8 HOH A 150 550 107 HOH HOH . S 8 HOH A 151 551 103 HOH HOH . S 8 HOH A 152 552 141 HOH HOH . S 8 HOH A 153 553 34 HOH HOH . S 8 HOH A 154 554 127 HOH HOH . S 8 HOH A 155 555 188 HOH HOH . S 8 HOH A 156 556 120 HOH HOH . S 8 HOH A 157 557 163 HOH HOH . S 8 HOH A 158 558 165 HOH HOH . S 8 HOH A 159 559 121 HOH HOH . S 8 HOH A 160 560 167 HOH HOH . S 8 HOH A 161 561 138 HOH HOH . S 8 HOH A 162 562 83 HOH HOH . S 8 HOH A 163 563 117 HOH HOH . S 8 HOH A 164 564 155 HOH HOH . S 8 HOH A 165 565 174 HOH HOH . S 8 HOH A 166 566 132 HOH HOH . S 8 HOH A 167 567 46 HOH HOH . S 8 HOH A 168 568 149 HOH HOH . S 8 HOH A 169 569 72 HOH HOH . S 8 HOH A 170 570 157 HOH HOH . S 8 HOH A 171 571 144 HOH HOH . S 8 HOH A 172 572 139 HOH HOH . S 8 HOH A 173 573 172 HOH HOH . S 8 HOH A 174 574 105 HOH HOH . S 8 HOH A 175 575 21 HOH HOH . S 8 HOH A 176 576 78 HOH HOH . S 8 HOH A 177 577 175 HOH HOH . S 8 HOH A 178 578 129 HOH HOH . S 8 HOH A 179 579 85 HOH HOH . S 8 HOH A 180 580 128 HOH HOH . S 8 HOH A 181 581 108 HOH HOH . S 8 HOH A 182 582 54 HOH HOH . S 8 HOH A 183 583 170 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . I 5 16.175 11.077 331.25 1 55.17 ? C1 GOL 308 A 1 HETATM 2 O O1 GOL . . . I 5 17.085 10.658 330.255 1 51.55 ? O1 GOL 308 A 1 HETATM 3 C C2 GOL . . . I 5 14.94 10.112 331.204 1 60.88 ? C2 GOL 308 A 1 HETATM 4 O O2 GOL . . . I 5 13.708 10.804 331.304 1 64.26 ? O2 GOL 308 A 1 HETATM 5 C C3 GOL . . . I 5 15.09 9.328 329.862 1 56.27 ? C3 GOL 308 A 1 HETATM 6 O O3 GOL . . . I 5 14.332 10.02 328.883 1 59.43 ? O3 GOL 308 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 217 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #