data_6PQN # _model_server_result.job_id mlI3LlZMj32-UOJZvNvmYA _model_server_result.datetime_utc '2025-04-11 00:51:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6pqn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":605}' # _entry.id 6PQN # _exptl.entry_id 6PQN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6PQN _cell.length_a 160.292 _cell.length_b 160.292 _cell.length_c 235.858 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PQN _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall 'P 61 2 (x,y,z+5/12)' _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 224 A CYS 240 1_555 A SG CYS 227 A CYS 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc1 A SG CYS 224 A CYS 240 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc2 A SG CYS 227 A CYS 243 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc3 A NE2 HIS 392 A HIS 408 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc4 A NE2 HIS 397 A HIS 413 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc5 B SG CYS 224 B CYS 240 1_555 N ZN ZN . B ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc6 B SG CYS 227 B CYS 243 1_555 N ZN ZN . B ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc7 B NE2 HIS 392 B HIS 408 1_555 N ZN ZN . B ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc8 B NE2 HIS 397 B HIS 413 1_555 N ZN ZN . B ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc9 B OD2 ASP 465 B ASP 481 1_555 M NA NA . B NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.628 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 273 n n P O2 PO4 sing 274 n n P O3 PO4 sing 275 n n P O4 PO4 sing 276 n n # _atom_sites.entry_id 6PQN _atom_sites.fract_transf_matrix[1][1] 0.006239 _atom_sites.fract_transf_matrix[1][2] 0.003602 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007204 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00424 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 601 601 ZN ZN . D 3 PO4 A 1 602 3 PO4 PO4 . E 3 PO4 A 1 603 5 PO4 PO4 . F 3 PO4 A 1 604 6 PO4 PO4 . G 3 PO4 A 1 605 8 PO4 PO4 . H 3 PO4 A 1 606 10 PO4 PO4 . I 4 GOL A 1 607 11 GOL GOL . J 4 GOL A 1 608 13 GOL GOL . K 4 GOL A 1 609 14 GOL GOL . L 4 GOL A 1 610 15 GOL GOL . M 5 NA B 1 601 602 NA NA . N 2 ZN B 1 602 601 ZN ZN . O 3 PO4 B 1 603 1 PO4 PO4 . P 3 PO4 B 1 604 2 PO4 PO4 . Q 3 PO4 B 1 605 4 PO4 PO4 . R 3 PO4 B 1 606 7 PO4 PO4 . S 3 PO4 B 1 607 9 PO4 PO4 . T 4 GOL B 1 608 12 GOL GOL . U 6 HOH A 1 701 13 HOH HOH . U 6 HOH A 2 702 4 HOH HOH . U 6 HOH A 3 703 3 HOH HOH . U 6 HOH A 4 704 28 HOH HOH . U 6 HOH A 5 705 25 HOH HOH . U 6 HOH A 6 706 22 HOH HOH . U 6 HOH A 7 707 14 HOH HOH . U 6 HOH A 8 708 1 HOH HOH . U 6 HOH A 9 709 27 HOH HOH . U 6 HOH A 10 710 7 HOH HOH . U 6 HOH A 11 711 24 HOH HOH . U 6 HOH A 12 712 23 HOH HOH . U 6 HOH A 13 713 8 HOH HOH . U 6 HOH A 14 714 10 HOH HOH . U 6 HOH A 15 715 29 HOH HOH . U 6 HOH A 16 716 2 HOH HOH . V 6 HOH B 1 701 26 HOH HOH . V 6 HOH B 2 702 5 HOH HOH . V 6 HOH B 3 703 9 HOH HOH . V 6 HOH B 4 704 12 HOH HOH . V 6 HOH B 5 705 11 HOH HOH . V 6 HOH B 6 706 15 HOH HOH . V 6 HOH B 7 707 17 HOH HOH . V 6 HOH B 8 708 18 HOH HOH . V 6 HOH B 9 709 20 HOH HOH . V 6 HOH B 10 710 16 HOH HOH . V 6 HOH B 11 711 21 HOH HOH . V 6 HOH B 12 712 19 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . Q 3 7.892 75.175 127.499 1 156.6 ? P PO4 605 B 1 HETATM 2 O O1 PO4 . . . Q 3 8.322 74.244 126.388 1 150.4 ? O1 PO4 605 B 1 HETATM 3 O O2 PO4 . . . Q 3 6.48 75.644 127.245 1 168.35 ? O2 PO4 605 B 1 HETATM 4 O O3 PO4 . . . Q 3 8.781 76.401 127.565 1 111.91 ? O3 PO4 605 B 1 HETATM 5 O O4 PO4 . . . Q 3 7.931 74.39 128.791 1 164.24 ? O4 PO4 605 B 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #