data_6PR7 # _model_server_result.job_id cjbjEhlGCBDkRMgL4zvhcA _model_server_result.datetime_utc '2024-10-10 07:23:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6pr7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 6PR7 # _exptl.entry_id 6PR7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 536.624 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2E)-1-[(1S)-1-benzylphthalazin-2(1H)-yl]-3-{5-[(2,4-diaminopyrimidin-5-yl)methyl]-2,3-dimethoxyphenyl}prop-2-en-1-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6PR7 _cell.length_a 79.05 _cell.length_b 79.05 _cell.length_c 107.49 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PR7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C31 H32 N6 O3' _chem_comp.formula_weight 536.624 _chem_comp.id OWP _chem_comp.mon_nstd_flag . _chem_comp.name (2E)-1-[(1S)-1-benzylphthalazin-2(1H)-yl]-3-{5-[(2,4-diaminopyrimidin-5-yl)methyl]-2,3-dimethoxyphenyl}prop-2-en-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 O11 OWP sing 317 n n C09 O08 OWP sing 318 n n O08 C07 OWP sing 319 n n O11 C10 OWP sing 320 n n C07 C10 OWP doub 321 n y C07 C06 OWP sing 322 n y C10 C13 OWP sing 323 n y C06 C05 OWP doub 324 n y C13 C14 OWP sing 325 n n C13 C31 OWP doub 326 n y C14 C15 OWP doub 327 e n C05 C31 OWP sing 328 n y C05 C04 OWP sing 329 n n C32 N33 OWP doub 330 n y C32 C03 OWP sing 331 n y O30 C16 OWP doub 332 n n N33 C34 OWP sing 333 n y C15 C16 OWP sing 334 n n C04 C03 OWP sing 335 n n C16 N17 OWP sing 336 n n C03 C02 OWP doub 337 n y C34 N35 OWP sing 338 n n C34 N36 OWP doub 339 n y C39 C41 OWP doub 340 n y C39 C22 OWP sing 341 n y C21 C22 OWP sing 342 n n C21 C20 OWP sing 343 n n C41 C42 OWP sing 344 n y C22 C38 OWP doub 345 n y C02 N36 OWP sing 346 n y C02 N01 OWP sing 347 n n N17 C20 OWP sing 348 n n N17 N18 OWP sing 349 n n C20 C24 OWP sing 350 n n C42 C40 OWP doub 351 n y C38 C40 OWP sing 352 n y N18 C19 OWP sing 353 n n C24 C29 OWP doub 354 n y C24 C25 OWP sing 355 n y C29 C28 OWP sing 356 n y C19 C25 OWP sing 357 n n C25 C26 OWP doub 358 n y C28 C27 OWP doub 359 n y C26 C27 OWP sing 360 n y C04 H1 OWP sing 361 n n C04 H2 OWP sing 362 n n C06 H3 OWP sing 363 n n C09 H4 OWP sing 364 n n C09 H5 OWP sing 365 n n C09 H6 OWP sing 366 n n C12 H7 OWP sing 367 n n C12 H8 OWP sing 368 n n C12 H9 OWP sing 369 n n C14 H10 OWP sing 370 n n C15 H11 OWP sing 371 n n C19 H12 OWP sing 372 n n C20 H13 OWP sing 373 n n C21 H14 OWP sing 374 n n C21 H15 OWP sing 375 n n C26 H16 OWP sing 376 n n C27 H17 OWP sing 377 n n C28 H18 OWP sing 378 n n C29 H19 OWP sing 379 n n C31 H20 OWP sing 380 n n C32 H21 OWP sing 381 n n C38 H22 OWP sing 382 n n C39 H23 OWP sing 383 n n C40 H24 OWP sing 384 n n C41 H25 OWP sing 385 n n C42 H26 OWP sing 386 n n N01 H27 OWP sing 387 n n N01 H28 OWP sing 388 n n N35 H29 OWP sing 389 n n N35 H30 OWP sing 390 n n C19 H31 OWP sing 391 n n N18 H32 OWP sing 392 n n # _atom_sites.entry_id 6PR7 _atom_sites.fract_transf_matrix[1][1] 0.01265 _atom_sites.fract_transf_matrix[1][2] 0.007304 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014607 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009303 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP A 1 201 201 NAP NAP . C 3 OWP A 1 202 301 OWP 60 . D 4 GOL A 1 203 401 GOL GOL . E 4 GOL A 1 204 501 GOL GOL . F 5 HOH A 1 301 111 HOH HOH . F 5 HOH A 2 302 47 HOH HOH . F 5 HOH A 3 303 90 HOH HOH . F 5 HOH A 4 304 25 HOH HOH . F 5 HOH A 5 305 83 HOH HOH . F 5 HOH A 6 306 77 HOH HOH . F 5 HOH A 7 307 16 HOH HOH . F 5 HOH A 8 308 61 HOH HOH . F 5 HOH A 9 309 29 HOH HOH . F 5 HOH A 10 310 106 HOH HOH . F 5 HOH A 11 311 44 HOH HOH . F 5 HOH A 12 312 27 HOH HOH . F 5 HOH A 13 313 20 HOH HOH . F 5 HOH A 14 314 71 HOH HOH . F 5 HOH A 15 315 49 HOH HOH . F 5 HOH A 16 316 9 HOH HOH . F 5 HOH A 17 317 66 HOH HOH . F 5 HOH A 18 318 19 HOH HOH . F 5 HOH A 19 319 15 HOH HOH . F 5 HOH A 20 320 31 HOH HOH . F 5 HOH A 21 321 98 HOH HOH . F 5 HOH A 22 322 53 HOH HOH . F 5 HOH A 23 323 57 HOH HOH . F 5 HOH A 24 324 30 HOH HOH . F 5 HOH A 25 325 10 HOH HOH . F 5 HOH A 26 326 55 HOH HOH . F 5 HOH A 27 327 32 HOH HOH . F 5 HOH A 28 328 1 HOH HOH . F 5 HOH A 29 329 108 HOH HOH . F 5 HOH A 30 330 52 HOH HOH . F 5 HOH A 31 331 59 HOH HOH . F 5 HOH A 32 332 21 HOH HOH . F 5 HOH A 33 333 103 HOH HOH . F 5 HOH A 34 334 56 HOH HOH . F 5 HOH A 35 335 107 HOH HOH . F 5 HOH A 36 336 93 HOH HOH . F 5 HOH A 37 337 112 HOH HOH . F 5 HOH A 38 338 13 HOH HOH . F 5 HOH A 39 339 7 HOH HOH . F 5 HOH A 40 340 23 HOH HOH . F 5 HOH A 41 341 42 HOH HOH . F 5 HOH A 42 342 68 HOH HOH . F 5 HOH A 43 343 79 HOH HOH . F 5 HOH A 44 344 3 HOH HOH . F 5 HOH A 45 345 51 HOH HOH . F 5 HOH A 46 346 86 HOH HOH . F 5 HOH A 47 347 105 HOH HOH . F 5 HOH A 48 348 39 HOH HOH . F 5 HOH A 49 349 62 HOH HOH . F 5 HOH A 50 350 50 HOH HOH . F 5 HOH A 51 351 64 HOH HOH . F 5 HOH A 52 352 43 HOH HOH . F 5 HOH A 53 353 58 HOH HOH . F 5 HOH A 54 354 28 HOH HOH . F 5 HOH A 55 355 54 HOH HOH . F 5 HOH A 56 356 101 HOH HOH . F 5 HOH A 57 357 36 HOH HOH . F 5 HOH A 58 358 74 HOH HOH . F 5 HOH A 59 359 82 HOH HOH . F 5 HOH A 60 360 34 HOH HOH . F 5 HOH A 61 361 8 HOH HOH . F 5 HOH A 62 362 17 HOH HOH . F 5 HOH A 63 363 12 HOH HOH . F 5 HOH A 64 364 115 HOH HOH . F 5 HOH A 65 365 67 HOH HOH . F 5 HOH A 66 366 65 HOH HOH . F 5 HOH A 67 367 4 HOH HOH . F 5 HOH A 68 368 5 HOH HOH . F 5 HOH A 69 369 35 HOH HOH . F 5 HOH A 70 370 18 HOH HOH . F 5 HOH A 71 371 80 HOH HOH . F 5 HOH A 72 372 104 HOH HOH . F 5 HOH A 73 373 75 HOH HOH . F 5 HOH A 74 374 48 HOH HOH . F 5 HOH A 75 375 76 HOH HOH . F 5 HOH A 76 376 84 HOH HOH . F 5 HOH A 77 377 110 HOH HOH . F 5 HOH A 78 378 45 HOH HOH . F 5 HOH A 79 379 38 HOH HOH . F 5 HOH A 80 380 89 HOH HOH . F 5 HOH A 81 381 78 HOH HOH . F 5 HOH A 82 382 92 HOH HOH . F 5 HOH A 83 383 63 HOH HOH . F 5 HOH A 84 384 60 HOH HOH . F 5 HOH A 85 385 113 HOH HOH . F 5 HOH A 86 386 24 HOH HOH . F 5 HOH A 87 387 11 HOH HOH . F 5 HOH A 88 388 109 HOH HOH . F 5 HOH A 89 389 37 HOH HOH . F 5 HOH A 90 390 72 HOH HOH . F 5 HOH A 91 391 97 HOH HOH . F 5 HOH A 92 392 100 HOH HOH . F 5 HOH A 93 393 99 HOH HOH . F 5 HOH A 94 394 69 HOH HOH . F 5 HOH A 95 395 96 HOH HOH . F 5 HOH A 96 396 102 HOH HOH . F 5 HOH A 97 397 26 HOH HOH . F 5 HOH A 98 398 22 HOH HOH . F 5 HOH A 99 399 81 HOH HOH . F 5 HOH A 100 400 40 HOH HOH . F 5 HOH A 101 401 46 HOH HOH . F 5 HOH A 102 402 73 HOH HOH . F 5 HOH A 103 403 33 HOH HOH . F 5 HOH A 104 404 70 HOH HOH . F 5 HOH A 105 405 114 HOH HOH . F 5 HOH A 106 406 85 HOH HOH . F 5 HOH A 107 407 87 HOH HOH . F 5 HOH A 108 408 14 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C02 OWP . . . C 3 -4.452 28.759 -4.106 1 20.6 ? C02 OWP 202 A 1 HETATM 2 C C03 OWP . . . C 3 -4.669 29.771 -5.065 1 21.67 ? C03 OWP 202 A 1 HETATM 3 C C04 OWP . . . C 3 -3.663 30.91 -5.145 1 23.68 ? C04 OWP 202 A 1 HETATM 4 C C05 OWP . . . C 3 -4.127 32.095 -5.962 1 26.73 ? C05 OWP 202 A 1 HETATM 5 C C06 OWP . . . C 3 -3.354 32.49 -7.044 1 25.92 ? C06 OWP 202 A 1 HETATM 6 C C07 OWP . . . C 3 -3.748 33.571 -7.808 1 27.68 ? C07 OWP 202 A 1 HETATM 7 C C09 OWP . . . C 3 -1.802 33.299 -9.162 1 22.95 ? C09 OWP 202 A 1 HETATM 8 C C10 OWP . . . C 3 -4.902 34.258 -7.471 1 29.55 ? C10 OWP 202 A 1 HETATM 9 C C12 OWP . . . C 3 -6.036 34.897 -9.367 1 28.69 ? C12 OWP 202 A 1 HETATM 10 C C13 OWP . . . C 3 -5.672 33.882 -6.379 1 31.78 ? C13 OWP 202 A 1 HETATM 11 C C14 OWP . . . C 3 -6.957 34.622 -6.032 1 37.88 ? C14 OWP 202 A 1 HETATM 12 C C15 OWP . . . C 3 -7.028 35.737 -5.277 1 42.37 ? C15 OWP 202 A 1 HETATM 13 C C16 OWP . . . C 3 -8.366 36.46 -5.17 1 48.05 ? C16 OWP 202 A 1 HETATM 14 C C19 OWP . . . C 3 -9.94 35.226 -1.955 1 46.51 ? C19 OWP 202 A 1 HETATM 15 C C20 OWP . . . C 3 -10.527 36.952 -4.163 1 71.26 ? C20 OWP 202 A 1 HETATM 16 C C21 OWP . . . C 3 -11.682 36.133 -4.75 1 57.61 ? C21 OWP 202 A 1 HETATM 17 C C22 OWP . . . C 3 -13.036 36.685 -4.325 1 59.92 ? C22 OWP 202 A 1 HETATM 18 C C24 OWP . . . C 3 -10.871 37.436 -2.751 1 58.64 ? C24 OWP 202 A 1 HETATM 19 C C25 OWP . . . C 3 -10.588 36.599 -1.699 1 56.22 ? C25 OWP 202 A 1 HETATM 20 C C26 OWP . . . C 3 -10.889 37.016 -0.383 1 50.41 ? C26 OWP 202 A 1 HETATM 21 C C27 OWP . . . C 3 -11.469 38.262 -0.151 1 48.31 ? C27 OWP 202 A 1 HETATM 22 C C28 OWP . . . C 3 -11.755 39.11 -1.221 1 54.24 ? C28 OWP 202 A 1 HETATM 23 C C29 OWP . . . C 3 -11.451 38.708 -2.518 1 56.85 ? C29 OWP 202 A 1 HETATM 24 C C31 OWP . . . C 3 -5.282 32.793 -5.619 1 28.78 ? C31 OWP 202 A 1 HETATM 25 C C32 OWP . . . C 3 -5.805 29.663 -5.889 1 21.72 ? C32 OWP 202 A 1 HETATM 26 C C34 OWP . . . C 3 -6.385 27.696 -4.797 1 19.29 ? C34 OWP 202 A 1 HETATM 27 C C38 OWP . . . C 3 -13.781 36.068 -3.32 1 54.57 ? C38 OWP 202 A 1 HETATM 28 C C39 OWP . . . C 3 -13.531 37.825 -4.946 1 66.42 ? C39 OWP 202 A 1 HETATM 29 C C40 OWP . . . C 3 -15.012 36.598 -2.946 1 60.07 ? C40 OWP 202 A 1 HETATM 30 C C41 OWP . . . C 3 -14.759 38.354 -4.569 1 64.9 ? C41 OWP 202 A 1 HETATM 31 C C42 OWP . . . C 3 -15.499 37.738 -3.568 1 60.85 ? C42 OWP 202 A 1 HETATM 32 N N01 OWP . . . C 3 -3.315 28.798 -3.252 1 18.5 ? N01 OWP 202 A 1 HETATM 33 N N17 OWP . . . C 3 -9.317 36.184 -4.133 1 55.48 ? N17 OWP 202 A 1 HETATM 34 N N18 OWP . . . C 3 -9.064 35.226 -3.11 1 47.69 ? N18 OWP 202 A 1 HETATM 35 N N33 OWP . . . C 3 -6.628 28.619 -5.714 1 21.43 ? N33 OWP 202 A 1 HETATM 36 N N35 OWP . . . C 3 -7.28 26.612 -4.625 1 16.2 ? N35 OWP 202 A 1 HETATM 37 N N36 OWP . . . C 3 -5.338 27.76 -4.01 1 19.23 ? N36 OWP 202 A 1 HETATM 38 O O08 OWP . . . C 3 -3.004 33.993 -8.92 1 25.15 ? O08 OWP 202 A 1 HETATM 39 O O11 OWP . . . C 3 -5.295 35.337 -8.258 1 32.5 ? O11 OWP 202 A 1 HETATM 40 O O30 OWP . . . C 3 -8.643 37.304 -5.999 1 49.01 ? O30 OWP 202 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 40 #