data_6PR8 # _model_server_result.job_id PKoqjzo287dtut76z3BrbA _model_server_result.datetime_utc '2025-02-23 11:17:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6pr8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6PR8 # _exptl.entry_id 6PR8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 548.635 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2E)-3-{5-[(2,4-diaminopyrimidin-5-yl)methyl]-2,3-dimethoxyphenyl}-1-[(1S)-1-(3,5-dimethylphenyl)phthalazin-2(1H)-yl]prop-2-en-1-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6PR8 _cell.length_a 78.89 _cell.length_b 78.89 _cell.length_c 107.9 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PR8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C32 H32 N6 O3' _chem_comp.formula_weight 548.635 _chem_comp.id OWJ _chem_comp.mon_nstd_flag . _chem_comp.name (2E)-3-{5-[(2,4-diaminopyrimidin-5-yl)methyl]-2,3-dimethoxyphenyl}-1-[(1S)-1-(3,5-dimethylphenyl)phthalazin-2(1H)-yl]prop-2-en-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C26 O25 OWJ sing 317 n n C29 O28 OWJ sing 318 n n O28 C27 OWJ sing 319 n n O25 C24 OWJ sing 320 n n C16 C15 OWJ sing 321 n n C27 C24 OWJ doub 322 n y C27 C30 OWJ sing 323 n y C24 C23 OWJ sing 324 n y C30 C31 OWJ doub 325 n y C15 C14 OWJ doub 326 n y C15 C17 OWJ sing 327 n y C23 C22 OWJ sing 328 n n C23 C41 OWJ doub 329 n y C14 C13 OWJ sing 330 n y C22 C21 OWJ doub 331 e n C31 C41 OWJ sing 332 n y C31 C32 OWJ sing 333 n n O01 C02 OWJ doub 334 n n C34 N35 OWJ doub 335 n y C34 C33 OWJ sing 336 n y C17 C18 OWJ doub 337 n y N35 C36 OWJ sing 338 n y C21 C02 OWJ sing 339 n n C02 N03 OWJ sing 340 n n C32 C33 OWJ sing 341 n n C33 C39 OWJ doub 342 n y C36 N37 OWJ sing 343 n n C36 N38 OWJ doub 344 n y C13 C12 OWJ sing 345 n n C13 C20 OWJ doub 346 n y C18 C20 OWJ sing 347 n y C18 C19 OWJ sing 348 n n N03 C12 OWJ sing 349 n n N03 N04 OWJ sing 350 n n C39 N38 OWJ sing 351 n y C39 N40 OWJ sing 352 n n C12 C11 OWJ sing 353 n n N04 C05 OWJ doub 354 n n C11 C10 OWJ doub 355 n y C11 C06 OWJ sing 356 n y C05 C06 OWJ sing 357 n n C10 C09 OWJ sing 358 n y C06 C07 OWJ doub 359 n y C09 C08 OWJ doub 360 n y C07 C08 OWJ sing 361 n y C29 H1 OWJ sing 362 n n C29 H2 OWJ sing 363 n n C29 H3 OWJ sing 364 n n C30 H4 OWJ sing 365 n n C32 H5 OWJ sing 366 n n C32 H6 OWJ sing 367 n n C34 H7 OWJ sing 368 n n C05 H8 OWJ sing 369 n n C07 H9 OWJ sing 370 n n C08 H10 OWJ sing 371 n n C09 H11 OWJ sing 372 n n C10 H12 OWJ sing 373 n n C12 H13 OWJ sing 374 n n C14 H14 OWJ sing 375 n n C16 H15 OWJ sing 376 n n C16 H16 OWJ sing 377 n n C16 H17 OWJ sing 378 n n C17 H18 OWJ sing 379 n n C19 H19 OWJ sing 380 n n C19 H20 OWJ sing 381 n n C19 H21 OWJ sing 382 n n C20 H22 OWJ sing 383 n n C21 H23 OWJ sing 384 n n C22 H24 OWJ sing 385 n n C26 H25 OWJ sing 386 n n C26 H26 OWJ sing 387 n n C26 H27 OWJ sing 388 n n C41 H28 OWJ sing 389 n n N37 H29 OWJ sing 390 n n N37 H30 OWJ sing 391 n n N40 H31 OWJ sing 392 n n N40 H32 OWJ sing 393 n n # _atom_sites.entry_id 6PR8 _atom_sites.fract_transf_matrix[1][1] 0.012676 _atom_sites.fract_transf_matrix[1][2] 0.007318 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014637 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009268 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OWJ A 1 301 301 OWJ 66S . C 3 NAP A 1 302 201 NAP NAP . D 4 GOL A 1 303 401 GOL GOL . E 4 GOL A 1 304 501 GOL GOL . F 5 HOH A 1 401 168 HOH HOH . F 5 HOH A 2 402 174 HOH HOH . F 5 HOH A 3 403 140 HOH HOH . F 5 HOH A 4 404 87 HOH HOH . F 5 HOH A 5 405 36 HOH HOH . F 5 HOH A 6 406 50 HOH HOH . F 5 HOH A 7 407 173 HOH HOH . F 5 HOH A 8 408 24 HOH HOH . F 5 HOH A 9 409 149 HOH HOH . F 5 HOH A 10 410 80 HOH HOH . F 5 HOH A 11 411 139 HOH HOH . F 5 HOH A 12 412 22 HOH HOH . F 5 HOH A 13 413 122 HOH HOH . F 5 HOH A 14 414 41 HOH HOH . F 5 HOH A 15 415 165 HOH HOH . F 5 HOH A 16 416 64 HOH HOH . F 5 HOH A 17 417 95 HOH HOH . F 5 HOH A 18 418 40 HOH HOH . F 5 HOH A 19 419 7 HOH HOH . F 5 HOH A 20 420 147 HOH HOH . F 5 HOH A 21 421 70 HOH HOH . F 5 HOH A 22 422 113 HOH HOH . F 5 HOH A 23 423 91 HOH HOH . F 5 HOH A 24 424 134 HOH HOH . F 5 HOH A 25 425 8 HOH HOH . F 5 HOH A 26 426 127 HOH HOH . F 5 HOH A 27 427 79 HOH HOH . F 5 HOH A 28 428 94 HOH HOH . F 5 HOH A 29 429 11 HOH HOH . F 5 HOH A 30 430 48 HOH HOH . F 5 HOH A 31 431 38 HOH HOH . F 5 HOH A 32 432 32 HOH HOH . F 5 HOH A 33 433 57 HOH HOH . F 5 HOH A 34 434 135 HOH HOH . F 5 HOH A 35 435 35 HOH HOH . F 5 HOH A 36 436 159 HOH HOH . F 5 HOH A 37 437 67 HOH HOH . F 5 HOH A 38 438 103 HOH HOH . F 5 HOH A 39 439 169 HOH HOH . F 5 HOH A 40 440 14 HOH HOH . F 5 HOH A 41 441 171 HOH HOH . F 5 HOH A 42 442 84 HOH HOH . F 5 HOH A 43 443 3 HOH HOH . F 5 HOH A 44 444 97 HOH HOH . F 5 HOH A 45 445 6 HOH HOH . F 5 HOH A 46 446 16 HOH HOH . F 5 HOH A 47 447 69 HOH HOH . F 5 HOH A 48 448 167 HOH HOH . F 5 HOH A 49 449 117 HOH HOH . F 5 HOH A 50 450 33 HOH HOH . F 5 HOH A 51 451 58 HOH HOH . F 5 HOH A 52 452 18 HOH HOH . F 5 HOH A 53 453 92 HOH HOH . F 5 HOH A 54 454 1 HOH HOH . F 5 HOH A 55 455 115 HOH HOH . F 5 HOH A 56 456 61 HOH HOH . F 5 HOH A 57 457 42 HOH HOH . F 5 HOH A 58 458 4 HOH HOH . F 5 HOH A 59 459 111 HOH HOH . F 5 HOH A 60 460 131 HOH HOH . F 5 HOH A 61 461 28 HOH HOH . F 5 HOH A 62 462 102 HOH HOH . F 5 HOH A 63 463 130 HOH HOH . F 5 HOH A 64 464 78 HOH HOH . F 5 HOH A 65 465 23 HOH HOH . F 5 HOH A 66 466 49 HOH HOH . F 5 HOH A 67 467 114 HOH HOH . F 5 HOH A 68 468 47 HOH HOH . F 5 HOH A 69 469 2 HOH HOH . F 5 HOH A 70 470 82 HOH HOH . F 5 HOH A 71 471 53 HOH HOH . F 5 HOH A 72 472 60 HOH HOH . F 5 HOH A 73 473 44 HOH HOH . F 5 HOH A 74 474 63 HOH HOH . F 5 HOH A 75 475 56 HOH HOH . F 5 HOH A 76 476 54 HOH HOH . F 5 HOH A 77 477 34 HOH HOH . F 5 HOH A 78 478 62 HOH HOH . F 5 HOH A 79 479 116 HOH HOH . F 5 HOH A 80 480 101 HOH HOH . F 5 HOH A 81 481 100 HOH HOH . F 5 HOH A 82 482 162 HOH HOH . F 5 HOH A 83 483 75 HOH HOH . F 5 HOH A 84 484 142 HOH HOH . F 5 HOH A 85 485 45 HOH HOH . F 5 HOH A 86 486 21 HOH HOH . F 5 HOH A 87 487 65 HOH HOH . F 5 HOH A 88 488 27 HOH HOH . F 5 HOH A 89 489 19 HOH HOH . F 5 HOH A 90 490 88 HOH HOH . F 5 HOH A 91 491 20 HOH HOH . F 5 HOH A 92 492 129 HOH HOH . F 5 HOH A 93 493 109 HOH HOH . F 5 HOH A 94 494 148 HOH HOH . F 5 HOH A 95 495 71 HOH HOH . F 5 HOH A 96 496 13 HOH HOH . F 5 HOH A 97 497 5 HOH HOH . F 5 HOH A 98 498 68 HOH HOH . F 5 HOH A 99 499 52 HOH HOH . F 5 HOH A 100 500 73 HOH HOH . F 5 HOH A 101 501 108 HOH HOH . F 5 HOH A 102 502 26 HOH HOH . F 5 HOH A 103 503 107 HOH HOH . F 5 HOH A 104 504 144 HOH HOH . F 5 HOH A 105 505 74 HOH HOH . F 5 HOH A 106 506 9 HOH HOH . F 5 HOH A 107 507 55 HOH HOH . F 5 HOH A 108 508 51 HOH HOH . F 5 HOH A 109 509 154 HOH HOH . F 5 HOH A 110 510 120 HOH HOH . F 5 HOH A 111 511 83 HOH HOH . F 5 HOH A 112 512 119 HOH HOH . F 5 HOH A 113 513 29 HOH HOH . F 5 HOH A 114 514 125 HOH HOH . F 5 HOH A 115 515 10 HOH HOH . F 5 HOH A 116 516 66 HOH HOH . F 5 HOH A 117 517 146 HOH HOH . F 5 HOH A 118 518 81 HOH HOH . F 5 HOH A 119 519 128 HOH HOH . F 5 HOH A 120 520 17 HOH HOH . F 5 HOH A 121 521 160 HOH HOH . F 5 HOH A 122 522 151 HOH HOH . F 5 HOH A 123 523 105 HOH HOH . F 5 HOH A 124 524 121 HOH HOH . F 5 HOH A 125 525 96 HOH HOH . F 5 HOH A 126 526 93 HOH HOH . F 5 HOH A 127 527 141 HOH HOH . F 5 HOH A 128 528 46 HOH HOH . F 5 HOH A 129 529 76 HOH HOH . F 5 HOH A 130 530 86 HOH HOH . F 5 HOH A 131 531 143 HOH HOH . F 5 HOH A 132 532 77 HOH HOH . F 5 HOH A 133 533 90 HOH HOH . F 5 HOH A 134 534 172 HOH HOH . F 5 HOH A 135 535 43 HOH HOH . F 5 HOH A 136 536 112 HOH HOH . F 5 HOH A 137 537 98 HOH HOH . F 5 HOH A 138 538 163 HOH HOH . F 5 HOH A 139 539 31 HOH HOH . F 5 HOH A 140 540 137 HOH HOH . F 5 HOH A 141 541 124 HOH HOH . F 5 HOH A 142 542 110 HOH HOH . F 5 HOH A 143 543 176 HOH HOH . F 5 HOH A 144 544 145 HOH HOH . F 5 HOH A 145 545 118 HOH HOH . F 5 HOH A 146 546 104 HOH HOH . F 5 HOH A 147 547 72 HOH HOH . F 5 HOH A 148 548 15 HOH HOH . F 5 HOH A 149 549 25 HOH HOH . F 5 HOH A 150 550 30 HOH HOH . F 5 HOH A 151 551 155 HOH HOH . F 5 HOH A 152 552 126 HOH HOH . F 5 HOH A 153 553 164 HOH HOH . F 5 HOH A 154 554 136 HOH HOH . F 5 HOH A 155 555 150 HOH HOH . F 5 HOH A 156 556 170 HOH HOH . F 5 HOH A 157 557 59 HOH HOH . F 5 HOH A 158 558 39 HOH HOH . F 5 HOH A 159 559 157 HOH HOH . F 5 HOH A 160 560 89 HOH HOH . F 5 HOH A 161 561 133 HOH HOH . F 5 HOH A 162 562 153 HOH HOH . F 5 HOH A 163 563 99 HOH HOH . F 5 HOH A 164 564 138 HOH HOH . F 5 HOH A 165 565 161 HOH HOH . F 5 HOH A 166 566 132 HOH HOH . F 5 HOH A 167 567 166 HOH HOH . F 5 HOH A 168 568 85 HOH HOH . F 5 HOH A 169 569 106 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C29 OWJ . . . B 2 -1.793 33.267 -9.235 1 24.74 ? C29 OWJ 301 A 1 HETATM 2 C C30 OWJ . . . B 2 -3.373 32.324 -7.059 1 24.77 ? C30 OWJ 301 A 1 HETATM 3 C C31 OWJ . . . B 2 -4.118 31.925 -5.999 1 28.71 ? C31 OWJ 301 A 1 HETATM 4 C C32 OWJ . . . B 2 -3.675 30.726 -5.178 1 25.88 ? C32 OWJ 301 A 1 HETATM 5 C C34 OWJ . . . B 2 -5.824 29.493 -5.875 1 21.03 ? C34 OWJ 301 A 1 HETATM 6 C C39 OWJ . . . B 2 -4.5 28.609 -4.101 1 23.24 ? C39 OWJ 301 A 1 HETATM 7 C C02 OWJ . . . B 2 -8.107 36.731 -5.287 1 45.75 ? C02 OWJ 301 A 1 HETATM 8 C C05 OWJ . . . B 2 -9.613 35.308 -2.192 1 37.07 ? C05 OWJ 301 A 1 HETATM 9 C C06 OWJ . . . B 2 -10.271 36.559 -1.74 1 52.76 ? C06 OWJ 301 A 1 HETATM 10 C C07 OWJ . . . B 2 -10.596 36.753 -0.353 1 43.97 ? C07 OWJ 301 A 1 HETATM 11 C C08 OWJ . . . B 2 -11.201 37.907 0.062 1 42.53 ? C08 OWJ 301 A 1 HETATM 12 C C09 OWJ . . . B 2 -11.516 38.911 -0.864 1 42.92 ? C09 OWJ 301 A 1 HETATM 13 C C10 OWJ . . . B 2 -11.213 38.737 -2.17 1 51.56 ? C10 OWJ 301 A 1 HETATM 14 C C11 OWJ . . . B 2 -10.575 37.512 -2.615 1 58.89 ? C11 OWJ 301 A 1 HETATM 15 C C12 OWJ . . . B 2 -10.244 37.318 -4.085 1 60.8 ? C12 OWJ 301 A 1 HETATM 16 C C13 OWJ . . . B 2 -11.569 36.872 -4.764 1 54.69 ? C13 OWJ 301 A 1 HETATM 17 C C14 OWJ . . . B 2 -11.752 36.908 -6.145 1 51.66 ? C14 OWJ 301 A 1 HETATM 18 C C15 OWJ . . . B 2 -12.994 36.491 -6.707 1 50.81 ? C15 OWJ 301 A 1 HETATM 19 C C16 OWJ . . . B 2 -13.187 36.524 -8.163 1 59.58 ? C16 OWJ 301 A 1 HETATM 20 C C17 OWJ . . . B 2 -14.046 36.045 -5.866 1 55.22 ? C17 OWJ 301 A 1 HETATM 21 C C18 OWJ . . . B 2 -13.855 36.018 -4.484 1 50.95 ? C18 OWJ 301 A 1 HETATM 22 C C19 OWJ . . . B 2 -14.952 35.552 -3.534 1 47.42 ? C19 OWJ 301 A 1 HETATM 23 C C20 OWJ . . . B 2 -12.61 36.434 -3.942 1 49.99 ? C20 OWJ 301 A 1 HETATM 24 C C21 OWJ . . . B 2 -6.88 35.831 -5.515 1 40.65 ? C21 OWJ 301 A 1 HETATM 25 C C22 OWJ . . . B 2 -6.997 34.532 -6.054 1 38.88 ? C22 OWJ 301 A 1 HETATM 26 C C23 OWJ . . . B 2 -5.719 33.768 -6.423 1 32.89 ? C23 OWJ 301 A 1 HETATM 27 C C24 OWJ . . . B 2 -4.955 34.172 -7.511 1 30.48 ? C24 OWJ 301 A 1 HETATM 28 C C26 OWJ . . . B 2 -6.191 35.041 -9.404 1 31.19 ? C26 OWJ 301 A 1 HETATM 29 C C27 OWJ . . . B 2 -3.798 33.481 -7.855 1 29.39 ? C27 OWJ 301 A 1 HETATM 30 C C33 OWJ . . . B 2 -4.693 29.589 -5.052 1 25.42 ? C33 OWJ 301 A 1 HETATM 31 C C36 OWJ . . . B 2 -6.469 27.542 -4.784 1 19.98 ? C36 OWJ 301 A 1 HETATM 32 C C41 OWJ . . . B 2 -5.308 32.645 -5.647 1 30.58 ? C41 OWJ 301 A 1 HETATM 33 N N03 OWJ . . . B 2 -9.125 36.407 -4.268 1 50.03 ? N03 OWJ 301 A 1 HETATM 34 N N04 OWJ . . . B 2 -9.015 35.292 -3.469 1 45.33 ? N04 OWJ 301 A 1 HETATM 35 N N35 OWJ . . . B 2 -6.682 28.463 -5.706 1 21.37 ? N35 OWJ 301 A 1 HETATM 36 N N37 OWJ . . . B 2 -7.36 26.489 -4.605 1 12.19 ? N37 OWJ 301 A 1 HETATM 37 N N38 OWJ . . . B 2 -5.404 27.611 -3.987 1 19.61 ? N38 OWJ 301 A 1 HETATM 38 N N40 OWJ . . . B 2 -3.324 28.623 -3.195 1 18.84 ? N40 OWJ 301 A 1 HETATM 39 O O01 OWJ . . . B 2 -8.234 37.747 -5.965 1 50.46 ? O01 OWJ 301 A 1 HETATM 40 O O25 OWJ . . . B 2 -5.368 35.289 -8.294 1 38.22 ? O25 OWJ 301 A 1 HETATM 41 O O28 OWJ . . . B 2 -3.027 33.904 -8.965 1 24.61 ? O28 OWJ 301 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 55 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 41 #