data_6PRM
#
_model_server_result.job_id            '_jYQXBgWJ45eJ0haTFb6Eg' 
_model_server_result.datetime_utc      '2024-11-16 07:01:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6prm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":501}' 
#
_entry.id    6PRM 
#
_exptl.entry_id    6PRM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         82.22 
_cell.angle_beta          79.85 
_cell.angle_gamma         84.2 
_cell.entry_id            6PRM 
_cell.length_a            48.51 
_cell.length_b            88.58 
_cell.length_c            106.6 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6PRM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,I,J 1 1 
C,D,G,H,K,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 33 A ASP 37 1_555 E CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? 
metalc ? metalc2 A OD1 ASP 34 A ASP 38 1_555 E CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? 
metalc ? metalc3 A OD1 ASP 286 A ASP 290 1_555 E CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.627 ? 
metalc ? metalc4 A OD2 ASP 286 A ASP 290 1_555 E CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? 
metalc ? metalc5 A OD1 ASN 287 A ASN 291 1_555 E CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? 
metalc ? metalc6 B OD1 ASP 33 B ASP 37 1_555 F CA CA . B CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? 
metalc ? metalc7 B OD1 ASP 34 B ASP 38 1_555 F CA CA . B CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? 
metalc ? metalc8 B OD1 ASP 286 B ASP 290 1_555 F CA CA . B CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.578 ? 
metalc ? metalc9 B OD2 ASP 286 B ASP 290 1_555 F CA CA . B CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? 
metalc ? metalc10 B OD1 ASN 287 B ASN 291 1_555 F CA CA . B CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? 
metalc ? metalc11 C OD1 ASP 33 C ASP 37 1_555 G CA CA . C CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.966 ? 
metalc ? metalc12 C OD1 ASP 34 C ASP 38 1_555 G CA CA . C CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? 
metalc ? metalc13 C OD1 ASP 286 C ASP 290 1_555 G CA CA . C CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? 
metalc ? metalc14 C OD2 ASP 286 C ASP 290 1_555 G CA CA . C CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? 
metalc ? metalc15 C OD1 ASN 287 C ASN 291 1_555 G CA CA . C CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.637 ? 
metalc ? metalc16 D OD1 ASP 33 D ASP 37 1_555 H CA CA . D CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? 
metalc ? metalc17 D OD1 ASP 34 D ASP 38 1_555 H CA CA . D CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? 
metalc ? metalc18 D OD1 ASP 286 D ASP 290 1_555 H CA CA . D CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? 
metalc ? metalc19 D OD2 ASP 286 D ASP 290 1_555 H CA CA . D CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? 
metalc ? metalc20 D OD1 ASN 287 D ASN 291 1_555 H CA CA . D CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.52 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6PRM 
_atom_sites.fract_transf_matrix[1][1]    0.020614 
_atom_sites.fract_transf_matrix[1][2]    -0.002095 
_atom_sites.fract_transf_matrix[1][3]    -0.003466 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011347 
_atom_sites.fract_transf_matrix[2][3]    -0.001371 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009599 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 CA A 1 501 2 CA CA . 
F 2 CA B 1 501 1 CA CA . 
G 2 CA C 1 501 4 CA CA . 
H 2 CA D 1 501 3 CA CA . 
I 3 HOH A 1 601 34 HOH HOH . 
I 3 HOH A 2 602 23 HOH HOH . 
I 3 HOH A 3 603 76 HOH HOH . 
I 3 HOH A 4 604 37 HOH HOH . 
I 3 HOH A 5 605 87 HOH HOH . 
I 3 HOH A 6 606 98 HOH HOH . 
I 3 HOH A 7 607 72 HOH HOH . 
I 3 HOH A 8 608 92 HOH HOH . 
I 3 HOH A 9 609 16 HOH HOH . 
I 3 HOH A 10 610 63 HOH HOH . 
I 3 HOH A 11 611 35 HOH HOH . 
I 3 HOH A 12 612 22 HOH HOH . 
I 3 HOH A 13 613 29 HOH HOH . 
I 3 HOH A 14 614 77 HOH HOH . 
I 3 HOH A 15 615 38 HOH HOH . 
I 3 HOH A 16 616 57 HOH HOH . 
I 3 HOH A 17 617 39 HOH HOH . 
I 3 HOH A 18 618 52 HOH HOH . 
I 3 HOH A 19 619 19 HOH HOH . 
I 3 HOH A 20 620 64 HOH HOH . 
J 3 HOH B 1 601 42 HOH HOH . 
J 3 HOH B 2 602 56 HOH HOH . 
J 3 HOH B 3 603 83 HOH HOH . 
J 3 HOH B 4 604 65 HOH HOH . 
J 3 HOH B 5 605 20 HOH HOH . 
J 3 HOH B 6 606 47 HOH HOH . 
J 3 HOH B 7 607 13 HOH HOH . 
J 3 HOH B 8 608 26 HOH HOH . 
J 3 HOH B 9 609 84 HOH HOH . 
J 3 HOH B 10 610 8 HOH HOH . 
J 3 HOH B 11 611 86 HOH HOH . 
J 3 HOH B 12 612 61 HOH HOH . 
J 3 HOH B 13 613 93 HOH HOH . 
J 3 HOH B 14 614 51 HOH HOH . 
J 3 HOH B 15 615 73 HOH HOH . 
J 3 HOH B 16 616 17 HOH HOH . 
J 3 HOH B 17 617 21 HOH HOH . 
J 3 HOH B 18 618 11 HOH HOH . 
J 3 HOH B 19 619 28 HOH HOH . 
J 3 HOH B 20 620 27 HOH HOH . 
J 3 HOH B 21 621 69 HOH HOH . 
J 3 HOH B 22 622 4 HOH HOH . 
J 3 HOH B 23 623 70 HOH HOH . 
J 3 HOH B 24 624 101 HOH HOH . 
J 3 HOH B 25 625 54 HOH HOH . 
J 3 HOH B 26 626 60 HOH HOH . 
J 3 HOH B 27 627 15 HOH HOH . 
J 3 HOH B 28 628 71 HOH HOH . 
K 3 HOH C 1 601 88 HOH HOH . 
K 3 HOH C 2 602 25 HOH HOH . 
K 3 HOH C 3 603 99 HOH HOH . 
K 3 HOH C 4 604 78 HOH HOH . 
K 3 HOH C 5 605 74 HOH HOH . 
K 3 HOH C 6 606 91 HOH HOH . 
K 3 HOH C 7 607 100 HOH HOH . 
K 3 HOH C 8 608 85 HOH HOH . 
K 3 HOH C 9 609 81 HOH HOH . 
K 3 HOH C 10 610 95 HOH HOH . 
K 3 HOH C 11 611 3 HOH HOH . 
K 3 HOH C 12 612 36 HOH HOH . 
K 3 HOH C 13 613 96 HOH HOH . 
K 3 HOH C 14 614 50 HOH HOH . 
K 3 HOH C 15 615 10 HOH HOH . 
K 3 HOH C 16 616 75 HOH HOH . 
K 3 HOH C 17 617 31 HOH HOH . 
K 3 HOH C 18 618 67 HOH HOH . 
K 3 HOH C 19 619 59 HOH HOH . 
K 3 HOH C 20 620 44 HOH HOH . 
K 3 HOH C 21 621 48 HOH HOH . 
K 3 HOH C 22 622 7 HOH HOH . 
K 3 HOH C 23 623 49 HOH HOH . 
K 3 HOH C 24 624 103 HOH HOH . 
L 3 HOH D 1 601 97 HOH HOH . 
L 3 HOH D 2 602 90 HOH HOH . 
L 3 HOH D 3 603 62 HOH HOH . 
L 3 HOH D 4 604 55 HOH HOH . 
L 3 HOH D 5 605 80 HOH HOH . 
L 3 HOH D 6 606 12 HOH HOH . 
L 3 HOH D 7 607 102 HOH HOH . 
L 3 HOH D 8 608 30 HOH HOH . 
L 3 HOH D 9 609 105 HOH HOH . 
L 3 HOH D 10 610 79 HOH HOH . 
L 3 HOH D 11 611 33 HOH HOH . 
L 3 HOH D 12 612 89 HOH HOH . 
L 3 HOH D 13 613 46 HOH HOH . 
L 3 HOH D 14 614 66 HOH HOH . 
L 3 HOH D 15 615 82 HOH HOH . 
L 3 HOH D 16 616 41 HOH HOH . 
L 3 HOH D 17 617 14 HOH HOH . 
L 3 HOH D 18 618 6 HOH HOH . 
L 3 HOH D 19 619 24 HOH HOH . 
L 3 HOH D 20 620 5 HOH HOH . 
L 3 HOH D 21 621 32 HOH HOH . 
L 3 HOH D 22 622 18 HOH HOH . 
L 3 HOH D 23 623 9 HOH HOH . 
L 3 HOH D 24 624 1 HOH HOH . 
L 3 HOH D 25 625 53 HOH HOH . 
L 3 HOH D 26 626 2 HOH HOH . 
L 3 HOH D 27 627 94 HOH HOH . 
L 3 HOH D 28 628 43 HOH HOH . 
L 3 HOH D 29 629 45 HOH HOH . 
L 3 HOH D 30 630 40 HOH HOH . 
L 3 HOH D 31 631 104 HOH HOH . 
L 3 HOH D 32 632 68 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -82.675 
_atom_site.Cartn_y               -38.878 
_atom_site.Cartn_z               -166.473 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        36.2 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           501 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    27 
_model_server_stats.query_time_ms           252 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#