data_6PS4 # _model_server_result.job_id 3LLhbU_ElGFV19_YeU4rNA _model_server_result.datetime_utc '2024-11-24 00:55:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ps4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1205}' # _entry.id 6PS4 # _exptl.entry_id 6PS4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.654 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6PS4 _cell.length_a 41.5 _cell.length_b 76.2 _cell.length_c 171.62 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PS4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 130 A CYS 106 1_555 A SG CYS 215 A CYS 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 208 A CYS 184 1_555 A SG CYS 214 A CYS 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 70 n n C1 C10 CLR sing 71 n n C1 H11 CLR sing 72 n n C1 H12 CLR sing 73 n n C2 C3 CLR sing 74 n n C2 H21 CLR sing 75 n n C2 H22 CLR sing 76 n n C3 C4 CLR sing 77 n n C3 O1 CLR sing 78 n n C3 H3 CLR sing 79 n n C4 C5 CLR sing 80 n n C4 H41 CLR sing 81 n n C4 H42 CLR sing 82 n n C5 C6 CLR doub 83 n n C5 C10 CLR sing 84 n n C6 C7 CLR sing 85 n n C6 H6 CLR sing 86 n n C7 C8 CLR sing 87 n n C7 H71 CLR sing 88 n n C7 H72 CLR sing 89 n n C8 C9 CLR sing 90 n n C8 C14 CLR sing 91 n n C8 H8 CLR sing 92 n n C9 C10 CLR sing 93 n n C9 C11 CLR sing 94 n n C9 H9 CLR sing 95 n n C10 C19 CLR sing 96 n n C11 C12 CLR sing 97 n n C11 H111 CLR sing 98 n n C11 H112 CLR sing 99 n n C12 C13 CLR sing 100 n n C12 H121 CLR sing 101 n n C12 H122 CLR sing 102 n n C13 C14 CLR sing 103 n n C13 C17 CLR sing 104 n n C13 C18 CLR sing 105 n n C14 C15 CLR sing 106 n n C14 H14 CLR sing 107 n n C15 C16 CLR sing 108 n n C15 H151 CLR sing 109 n n C15 H152 CLR sing 110 n n C16 C17 CLR sing 111 n n C16 H161 CLR sing 112 n n C16 H162 CLR sing 113 n n C17 C20 CLR sing 114 n n C17 H17 CLR sing 115 n n C18 H181 CLR sing 116 n n C18 H182 CLR sing 117 n n C18 H183 CLR sing 118 n n C19 H191 CLR sing 119 n n C19 H192 CLR sing 120 n n C19 H193 CLR sing 121 n n C20 C21 CLR sing 122 n n C20 C22 CLR sing 123 n n C20 H20 CLR sing 124 n n C21 H211 CLR sing 125 n n C21 H212 CLR sing 126 n n C21 H213 CLR sing 127 n n C22 C23 CLR sing 128 n n C22 H221 CLR sing 129 n n C22 H222 CLR sing 130 n n C23 C24 CLR sing 131 n n C23 H231 CLR sing 132 n n C23 H232 CLR sing 133 n n C24 C25 CLR sing 134 n n C24 H241 CLR sing 135 n n C24 H242 CLR sing 136 n n C25 C26 CLR sing 137 n n C25 C27 CLR sing 138 n n C25 H25 CLR sing 139 n n C26 H261 CLR sing 140 n n C26 H262 CLR sing 141 n n C26 H263 CLR sing 142 n n C27 H271 CLR sing 143 n n C27 H272 CLR sing 144 n n C27 H273 CLR sing 145 n n O1 H1 CLR sing 146 n n # _atom_sites.entry_id 6PS4 _atom_sites.fract_transf_matrix[1][1] 0.024096 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013123 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005827 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 JRZ A 1 1201 1200 JRZ JRZ . C 3 SO4 A 1 1202 1 SO4 SO4 . D 3 SO4 A 1 1203 2 SO4 SO4 . E 3 SO4 A 1 1204 3 SO4 SO4 . F 4 CLR A 1 1205 400 CLR CLR . G 5 OLA A 1 1206 401 OLA OLA . H 5 OLA A 1 1207 412 OLA OLA . I 5 OLA A 1 1208 413 OLA OLA . J 5 OLA A 1 1209 424 OLA OLA . K 6 OLC A 1 1210 425 OLC OLC . L 6 OLC A 1 1211 426 OLC OLC . M 6 OLC A 1 1212 427 OLC OLC . N 6 OLC A 1 1213 438 OLC OLC . O 6 OLC A 1 1214 439 OLC OLC . P 6 OLC A 1 1215 510 OLC OLC . Q 6 OLC A 1 1216 511 OLC OLC . R 6 OLC A 1 1217 512 OLC OLC . S 6 OLC A 1 1218 513 OLC OLC . T 6 OLC A 1 1219 514 OLC OLC . U 7 HOH A 1 1301 35 HOH HOH . U 7 HOH A 2 1302 36 HOH HOH . U 7 HOH A 3 1303 37 HOH HOH . U 7 HOH A 4 1304 39 HOH HOH . U 7 HOH A 5 1305 38 HOH HOH . U 7 HOH A 6 1306 43 HOH HOH . U 7 HOH A 7 1307 40 HOH HOH . U 7 HOH A 8 1308 44 HOH HOH . U 7 HOH A 9 1309 41 HOH HOH . U 7 HOH A 10 1310 34 HOH HOH . U 7 HOH A 11 1311 33 HOH HOH . U 7 HOH A 12 1312 16 HOH HOH . U 7 HOH A 13 1313 42 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . F 4 -11.18 9.882 30.047 1 85.57 ? C1 CLR 1205 A 1 HETATM 2 C C2 CLR . . . F 4 -10.934 9.809 28.527 1 85.42 ? C2 CLR 1205 A 1 HETATM 3 C C3 CLR . . . F 4 -9.445 9.862 28.181 1 85.44 ? C3 CLR 1205 A 1 HETATM 4 C C4 CLR . . . F 4 -8.755 8.654 28.803 1 84.92 ? C4 CLR 1205 A 1 HETATM 5 C C5 CLR . . . F 4 -8.96 8.685 30.309 1 84.51 ? C5 CLR 1205 A 1 HETATM 6 C C6 CLR . . . F 4 -7.847 8.499 31.056 1 82.9 ? C6 CLR 1205 A 1 HETATM 7 C C7 CLR . . . F 4 -7.708 9.119 32.43 1 82.22 ? C7 CLR 1205 A 1 HETATM 8 C C8 CLR . . . F 4 -9.028 8.972 33.189 1 82.71 ? C8 CLR 1205 A 1 HETATM 9 C C9 CLR . . . F 4 -10.153 9.622 32.336 1 84.61 ? C9 CLR 1205 A 1 HETATM 10 C C10 CLR . . . F 4 -10.35 8.932 30.947 1 84.79 ? C10 CLR 1205 A 1 HETATM 11 C C11 CLR . . . F 4 -11.466 9.777 33.163 1 84.57 ? C11 CLR 1205 A 1 HETATM 12 C C12 CLR . . . F 4 -11.296 10.334 34.599 1 83.55 ? C12 CLR 1205 A 1 HETATM 13 C C13 CLR . . . F 4 -10.241 9.582 35.438 1 83 ? C13 CLR 1205 A 1 HETATM 14 C C14 CLR . . . F 4 -8.962 9.604 34.587 1 82.02 ? C14 CLR 1205 A 1 HETATM 15 C C15 CLR . . . F 4 -7.863 9.132 35.525 1 82.28 ? C15 CLR 1205 A 1 HETATM 16 C C16 CLR . . . F 4 -8.256 9.805 36.835 1 83.48 ? C16 CLR 1205 A 1 HETATM 17 C C17 CLR . . . F 4 -9.688 10.356 36.668 1 84.2 ? C17 CLR 1205 A 1 HETATM 18 C C18 CLR . . . F 4 -10.76 8.16 35.789 1 82.05 ? C18 CLR 1205 A 1 HETATM 19 C C19 CLR . . . F 4 -11.078 7.578 31.045 1 83.57 ? C19 CLR 1205 A 1 HETATM 20 C C20 CLR . . . F 4 -10.467 10.377 38.01 1 84.93 ? C20 CLR 1205 A 1 HETATM 21 C C21 CLR . . . F 4 -11.864 10.999 37.937 1 84.87 ? C21 CLR 1205 A 1 HETATM 22 C C22 CLR . . . F 4 -9.695 11.14 39.091 1 85.2 ? C22 CLR 1205 A 1 HETATM 23 C C23 CLR . . . F 4 -9.565 10.35 40.391 1 85.84 ? C23 CLR 1205 A 1 HETATM 24 C C24 CLR . . . F 4 -10.062 11.179 41.572 1 85.26 ? C24 CLR 1205 A 1 HETATM 25 C C25 CLR . . . F 4 -10.198 10.326 42.829 1 85.36 ? C25 CLR 1205 A 1 HETATM 26 C C26 CLR . . . F 4 -9.655 11.052 44.057 1 84.24 ? C26 CLR 1205 A 1 HETATM 27 C C27 CLR . . . F 4 -11.64 9.875 43.048 1 86.25 ? C27 CLR 1205 A 1 HETATM 28 O O1 CLR . . . F 4 -9.252 9.857 26.765 1 86.51 ? O1 CLR 1205 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 363 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #