data_6PS5 # _model_server_result.job_id h18lJ1hW1XlmZF-lTiRqLA _model_server_result.datetime_utc '2025-02-22 21:15:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ps5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1206}' # _entry.id 6PS5 # _exptl.entry_id 6PS5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.654 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6PS5 _cell.length_a 42.73 _cell.length_b 77.6 _cell.length_c 173.88 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PS5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 130 A CYS 106 1_555 A SG CYS 215 A CYS 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 208 A CYS 184 1_555 A SG CYS 214 A CYS 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 70 n n C1 C10 CLR sing 71 n n C1 H11 CLR sing 72 n n C1 H12 CLR sing 73 n n C2 C3 CLR sing 74 n n C2 H21 CLR sing 75 n n C2 H22 CLR sing 76 n n C3 C4 CLR sing 77 n n C3 O1 CLR sing 78 n n C3 H3 CLR sing 79 n n C4 C5 CLR sing 80 n n C4 H41 CLR sing 81 n n C4 H42 CLR sing 82 n n C5 C6 CLR doub 83 n n C5 C10 CLR sing 84 n n C6 C7 CLR sing 85 n n C6 H6 CLR sing 86 n n C7 C8 CLR sing 87 n n C7 H71 CLR sing 88 n n C7 H72 CLR sing 89 n n C8 C9 CLR sing 90 n n C8 C14 CLR sing 91 n n C8 H8 CLR sing 92 n n C9 C10 CLR sing 93 n n C9 C11 CLR sing 94 n n C9 H9 CLR sing 95 n n C10 C19 CLR sing 96 n n C11 C12 CLR sing 97 n n C11 H111 CLR sing 98 n n C11 H112 CLR sing 99 n n C12 C13 CLR sing 100 n n C12 H121 CLR sing 101 n n C12 H122 CLR sing 102 n n C13 C14 CLR sing 103 n n C13 C17 CLR sing 104 n n C13 C18 CLR sing 105 n n C14 C15 CLR sing 106 n n C14 H14 CLR sing 107 n n C15 C16 CLR sing 108 n n C15 H151 CLR sing 109 n n C15 H152 CLR sing 110 n n C16 C17 CLR sing 111 n n C16 H161 CLR sing 112 n n C16 H162 CLR sing 113 n n C17 C20 CLR sing 114 n n C17 H17 CLR sing 115 n n C18 H181 CLR sing 116 n n C18 H182 CLR sing 117 n n C18 H183 CLR sing 118 n n C19 H191 CLR sing 119 n n C19 H192 CLR sing 120 n n C19 H193 CLR sing 121 n n C20 C21 CLR sing 122 n n C20 C22 CLR sing 123 n n C20 H20 CLR sing 124 n n C21 H211 CLR sing 125 n n C21 H212 CLR sing 126 n n C21 H213 CLR sing 127 n n C22 C23 CLR sing 128 n n C22 H221 CLR sing 129 n n C22 H222 CLR sing 130 n n C23 C24 CLR sing 131 n n C23 H231 CLR sing 132 n n C23 H232 CLR sing 133 n n C24 C25 CLR sing 134 n n C24 H241 CLR sing 135 n n C24 H242 CLR sing 136 n n C25 C26 CLR sing 137 n n C25 C27 CLR sing 138 n n C25 H25 CLR sing 139 n n C26 H261 CLR sing 140 n n C26 H262 CLR sing 141 n n C26 H263 CLR sing 142 n n C27 H271 CLR sing 143 n n C27 H272 CLR sing 144 n n C27 H273 CLR sing 145 n n O1 H1 CLR sing 146 n n # _atom_sites.entry_id 6PS5 _atom_sites.fract_transf_matrix[1][1] 0.023403 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012887 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005751 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SNP A 1 1201 1200 SNP SNP . C 3 SO4 A 1 1202 1 SO4 SO4 . D 3 SO4 A 1 1203 2 SO4 SO4 . E 3 SO4 A 1 1204 3 SO4 SO4 . F 3 SO4 A 1 1205 4 SO4 SO4 . G 4 CLR A 1 1206 402 CLR CLR . H 5 OLA A 1 1207 403 OLA OLA . I 5 OLA A 1 1208 404 OLA OLA . J 6 OLC A 1 1209 406 OLC OLC . K 6 OLC A 1 1210 507 OLC OLC . L 6 OLC A 1 1211 508 OLC OLC . M 6 OLC A 1 1212 509 OLC OLC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . G 4 -12.145 9.374 30.361 1 114.56 ? C1 CLR 1206 A 1 HETATM 2 C C2 CLR . . . G 4 -12.19 9.205 28.835 1 115.27 ? C2 CLR 1206 A 1 HETATM 3 C C3 CLR . . . G 4 -10.821 9.347 28.164 1 115.92 ? C3 CLR 1206 A 1 HETATM 4 C C4 CLR . . . G 4 -9.762 8.448 28.818 1 115.42 ? C4 CLR 1206 A 1 HETATM 5 C C5 CLR . . . G 4 -9.803 8.489 30.343 1 114.4 ? C5 CLR 1206 A 1 HETATM 6 C C6 CLR . . . G 4 -8.604 8.494 30.971 1 113.77 ? C6 CLR 1206 A 1 HETATM 7 C C7 CLR . . . G 4 -8.42 8.826 32.442 1 112.93 ? C7 CLR 1206 A 1 HETATM 8 C C8 CLR . . . G 4 -9.678 8.513 33.266 1 111.75 ? C8 CLR 1206 A 1 HETATM 9 C C9 CLR . . . G 4 -10.92 9.086 32.539 1 111.9 ? C9 CLR 1206 A 1 HETATM 10 C C10 CLR . . . G 4 -11.134 8.485 31.119 1 113.56 ? C10 CLR 1206 A 1 HETATM 11 C C11 CLR . . . G 4 -12.185 9.016 33.437 1 110.72 ? C11 CLR 1206 A 1 HETATM 12 C C12 CLR . . . G 4 -11.998 9.482 34.898 1 109.7 ? C12 CLR 1206 A 1 HETATM 13 C C13 CLR . . . G 4 -10.812 8.817 35.625 1 109.04 ? C13 CLR 1206 A 1 HETATM 14 C C14 CLR . . . G 4 -9.605 9.066 34.704 1 110.17 ? C14 CLR 1206 A 1 HETATM 15 C C15 CLR . . . G 4 -8.39 8.701 35.552 1 109.29 ? C15 CLR 1206 A 1 HETATM 16 C C16 CLR . . . G 4 -8.798 9.217 36.928 1 108.59 ? C16 CLR 1206 A 1 HETATM 17 C C17 CLR . . . G 4 -10.294 9.581 36.881 1 107.98 ? C17 CLR 1206 A 1 HETATM 18 C C18 CLR . . . G 4 -11.135 7.323 35.89 1 108.4 ? C18 CLR 1206 A 1 HETATM 19 C C19 CLR . . . G 4 -11.634 7.029 31.166 1 113.17 ? C19 CLR 1206 A 1 HETATM 20 C C20 CLR . . . G 4 -10.983 9.429 38.267 1 105.87 ? C20 CLR 1206 A 1 HETATM 21 C C21 CLR . . . G 4 -12.486 9.731 38.281 1 106.24 ? C21 CLR 1206 A 1 HETATM 22 C C22 CLR . . . G 4 -10.33 10.371 39.293 1 103.31 ? C22 CLR 1206 A 1 HETATM 23 C C23 CLR . . . G 4 -10.231 9.817 40.714 1 101.19 ? C23 CLR 1206 A 1 HETATM 24 C C24 CLR . . . G 4 -10.403 10.942 41.733 1 99.17 ? C24 CLR 1206 A 1 HETATM 25 C C25 CLR . . . G 4 -10.292 10.445 43.172 1 97.04 ? C25 CLR 1206 A 1 HETATM 26 C C26 CLR . . . G 4 -9.133 11.114 43.901 1 95.64 ? C26 CLR 1206 A 1 HETATM 27 C C27 CLR . . . G 4 -11.599 10.657 43.927 1 96.66 ? C27 CLR 1206 A 1 HETATM 28 O O1 CLR . . . G 4 -10.957 8.979 26.785 1 116.39 ? O1 CLR 1206 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 28 #